RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 A0A1W2PRQ8 180 aa2.16□□□□□ -2.06
COPS3-217ENST00000583160 HIP1O00291 1037 aa2.16□□□□□ -2.06
COPS3-217ENST00000583160 PES1O00541 588 aaKnown RBP2.16□□□□□ -2.06
COPS3-217ENST00000583160 ZBTB5O15062 677 aa2.16□□□□□ -2.06
COPS3-217ENST00000583160 NMT2O60551 498 aa2.16□□□□□ -2.06
COPS3-217ENST00000583160 HCN1O60741 890 aa2.16□□□□□ -2.06
COPS3-217ENST00000583160 CA3P07451 260 aa2.16□□□□□ -2.06
COPS3-217ENST00000583160 GCFC2P16383 781 aaKnown RBP2.16□□□□□ -2.06
COPS3-217ENST00000583160 XRCC1P18887 633 aaPredicted RBP2.16□□□□□ -2.06
COPS3-217ENST00000583160 LONP1P36776 959 aaKnown RBP2.16□□□□□ -2.06
COPS3-217ENST00000583160 ZNF136P52737 540 aa2.16□□□□□ -2.06
COPS3-217ENST00000583160 CCL23P55773 120 aa2.16□□□□□ -2.06
COPS3-217ENST00000583160 CSNK1G2P78368 415 aa2.16□□□□□ -2.06
COPS3-217ENST00000583160 MADCAM1Q13477 382 aa2.16□□□□□ -2.06
COPS3-217ENST00000583160 TMEM31Q5JXX7 168 aa2.16□□□□□ -2.06
COPS3-217ENST00000583160 LRRC70Q7Z2Q7 622 aa2.16□□□□□ -2.06
COPS3-217ENST00000583160 KRT77Q7Z794 578 aa2.16□□□□□ -2.06
COPS3-217ENST00000583160 IQCA1Q86XH1 822 aa2.16□□□□□ -2.06
COPS3-217ENST00000583160 CNTN4Q8IWV2 1026 aa2.16□□□□□ -2.06
COPS3-217ENST00000583160 MTURNQ8N3F0 131 aa2.16□□□□□ -2.06
COPS3-217ENST00000583160 RSPH1Q8WYR4 309 aa2.16□□□□□ -2.06
COPS3-217ENST00000583160 PIGCQ92535 297 aa2.16□□□□□ -2.06
COPS3-217ENST00000583160 ESR2Q92731 530 aa2.16□□□□□ -2.06
COPS3-217ENST00000583160 UCN3Q969E3 161 aa2.16□□□□□ -2.06
COPS3-217ENST00000583160 MRPL38Q96DV4 380 aaKnown RBP2.16□□□□□ -2.06
COPS3-217ENST00000583160 FAM210BQ96KR6 192 aa2.16□□□□□ -2.06
COPS3-217ENST00000583160 TAAR1Q96RJ0 339 aa2.16□□□□□ -2.06
COPS3-217ENST00000583160 SPZ1Q9BXG8 430 aa2.16□□□□□ -2.06
COPS3-217ENST00000583160 KRT23Q9C075 422 aa2.16□□□□□ -2.06
COPS3-217ENST00000583160 POLR3FQ9H1D9 316 aaPredicted RBP2.16□□□□□ -2.06
COPS3-217ENST00000583160 PXMP2Q9NR77 195 aa2.16□□□□□ -2.06
COPS3-217ENST00000583160 CRLS1Q9UJA2 301 aa2.16□□□□□ -2.06
COPS3-217ENST00000583160 PLXNA3P51805 1871 aa2.16□□□□□ -2.06
COPS3-217ENST00000583160 DENND4AQ7Z401 1863 aa2.16□□□□□ -2.06
COPS3-217ENST00000583160 PLXNA4Q9HCM2 1894 aa2.16□□□□□ -2.06
COPS3-217ENST00000583160 NRCAMQ92823 1304 aa2.16□□□□□ -2.06
COPS3-217ENST00000583160 IGKV1D-17A0A075B6S4 117 aa2.15□□□□□ -2.07
COPS3-217ENST00000583160 A0A096LNJ9 63 aa2.15□□□□□ -2.07
COPS3-217ENST00000583160 ADAM12O43184 909 aa2.15□□□□□ -2.07
COPS3-217ENST00000583160 CYTH3O43739 400 aa2.15□□□□□ -2.07
COPS3-217ENST00000583160 LGALS2P05162 132 aa2.15□□□□□ -2.07
COPS3-217ENST00000583160 GSTT2P0CG29 244 aa2.15□□□□□ -2.07
COPS3-217ENST00000583160 GSTT2BP0CG30 244 aa2.15□□□□□ -2.07
COPS3-217ENST00000583160 ADRB3P13945 408 aa2.15□□□□□ -2.07
COPS3-217ENST00000583160 COX7A1P24310 79 aa2.15□□□□□ -2.07
COPS3-217ENST00000583160 PRPS1P60891 318 aa2.15□□□□□ -2.07
COPS3-217ENST00000583160 DEFB103AP81534 67 aa2.15□□□□□ -2.07
COPS3-217ENST00000583160 MGAT3Q09327 533 aa2.15□□□□□ -2.07
COPS3-217ENST00000583160 ARFRP1Q13795 201 aa2.15□□□□□ -2.07
COPS3-217ENST00000583160 CDC37Q16543 378 aaPredicted RBP2.15□□□□□ -2.07
COPS3-217ENST00000583160 HSDL1Q3SXM5 330 aa2.15□□□□□ -2.07
COPS3-217ENST00000583160 RABGAP1LQ5R372 815 aa2.15□□□□□ -2.07
COPS3-217ENST00000583160 MARCH8Q5T0T0 291 aa2.15□□□□□ -2.07
COPS3-217ENST00000583160 ATF7IP2Q5U623 682 aa2.15□□□□□ -2.07
COPS3-217ENST00000583160 SCYL2Q6P3W7 929 aa2.15□□□□□ -2.07
COPS3-217ENST00000583160 NIPA1Q7RTP0 329 aa2.15□□□□□ -2.07
COPS3-217ENST00000583160 OR51G1Q8NGK1 321 aa2.15□□□□□ -2.07
COPS3-217ENST00000583160 RPUSD4Q96CM3 377 aaKnown RBP2.15□□□□□ -2.07
COPS3-217ENST00000583160 LZTS2Q9BRK4 669 aa2.15□□□□□ -2.07
COPS3-217ENST00000583160 WRAP53Q9BUR4 548 aaKnown RBP2.15□□□□□ -2.07
COPS3-217ENST00000583160 UBE2ZQ9H832 354 aaPredicted RBP2.15□□□□□ -2.07
COPS3-217ENST00000583160 C1orf123Q9NWV4 160 aa2.15□□□□□ -2.07
COPS3-217ENST00000583160 UTP6Q9NYH9 597 aaKnown RBP2.15□□□□□ -2.07
COPS3-217ENST00000583160 ERVW-1Q9UQF0 538 aa2.15□□□□□ -2.07
COPS3-217ENST00000583160 PLLPQ9Y342 182 aa2.15□□□□□ -2.07
COPS3-217ENST00000583160 NEUROG3Q9Y4Z2 214 aa2.15□□□□□ -2.07
COPS3-217ENST00000583160 UBIAD1Q9Y5Z9 338 aa2.15□□□□□ -2.07
COPS3-217ENST00000583160 DDX49Q9Y6V7 483 aaKnown RBP2.15□□□□□ -2.07
COPS3-217ENST00000583160 ZDBF2Q9HCK1 2354 aa2.15□□□□□ -2.07
COPS3-217ENST00000583160 NFASCO94856 1347 aa2.15□□□□□ -2.07
COPS3-217ENST00000583160 IGSF9BQ9UPX0 1349 aa2.15□□□□□ -2.07
COPS3-217ENST00000583160 USP34Q70CQ2 3546 aa2.14□□□□□ -2.07
COPS3-217ENST00000583160 DOCK8Q8NF50 2099 aa2.14□□□□□ -2.07
COPS3-217ENST00000583160 FAM186AA6NE01 2351 aa2.14□□□□□ -2.07
COPS3-217ENST00000583160 NID2Q14112 1375 aa2.14□□□□□ -2.07
COPS3-217ENST00000583160 IGHV3-64DA0A0J9YX35 117 aa2.14□□□□□ -2.07
COPS3-217ENST00000583160 GSTTP1A0A1W2PQM5 241 aa2.14□□□□□ -2.07
COPS3-217ENST00000583160 LOC730098B7Z3J9 87 aa2.14□□□□□ -2.07
COPS3-217ENST00000583160 MBTPS2O43462 519 aa2.14□□□□□ -2.07
COPS3-217ENST00000583160 POLR2MP0CAP2 368 aa2.14□□□□□ -2.07
COPS3-217ENST00000583160 SMIM10L2AP0DMW4 78 aa2.14□□□□□ -2.07
COPS3-217ENST00000583160 SMIM10L2BP0DMW5 78 aa2.14□□□□□ -2.07
COPS3-217ENST00000583160 IL9P15248 144 aa2.14□□□□□ -2.07
COPS3-217ENST00000583160 TBPP20226 339 aa2.14□□□□□ -2.07
COPS3-217ENST00000583160 SERPINA2P20848 420 aa2.14□□□□□ -2.07
COPS3-217ENST00000583160 CCND2P30279 289 aa2.14□□□□□ -2.07
COPS3-217ENST00000583160 ADSSP30520 456 aa2.14□□□□□ -2.07
COPS3-217ENST00000583160 PRDX2P32119 198 aa2.14□□□□□ -2.07
COPS3-217ENST00000583160 WASHC5Q12768 1159 aa2.14□□□□□ -2.07
COPS3-217ENST00000583160 MOBPQ13875 183 aa2.14□□□□□ -2.07
COPS3-217ENST00000583160 LY6EQ16553 131 aa2.14□□□□□ -2.07
COPS3-217ENST00000583160 IMMTQ16891 758 aaKnown RBP2.14□□□□□ -2.07
COPS3-217ENST00000583160 IGFL1Q6UW32 110 aa2.14□□□□□ -2.07
COPS3-217ENST00000583160 ARCQ7LC44 396 aa2.14□□□□□ -2.07
COPS3-217ENST00000583160 CCDC91Q7Z6B0 441 aa2.14□□□□□ -2.07
COPS3-217ENST00000583160 DEFB128Q7Z7B8 93 aa2.14□□□□□ -2.07
COPS3-217ENST00000583160 VRK2Q86Y07 508 aa2.14□□□□□ -2.07
COPS3-217ENST00000583160 ZNF713Q8N859 430 aaPredicted RBP2.14□□□□□ -2.07
COPS3-217ENST00000583160 EXOC6Q8TAG9 804 aa2.14□□□□□ -2.07
COPS3-217ENST00000583160 SLC5A11Q8WWX8 675 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms