RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 KDM4EB2RXH2 506 aaPredicted RBP8.53□□□□□ -1.04
RFFL-210ENST00000582308 PLPP3O14495 311 aa8.53□□□□□ -1.04
RFFL-210ENST00000582308 BCKDKO14874 412 aa8.53□□□□□ -1.04
RFFL-210ENST00000582308 DNPH1O43598 174 aa8.53□□□□□ -1.04
RFFL-210ENST00000582308 RAMP1O60894 148 aa8.53□□□□□ -1.04
RFFL-210ENST00000582308 MITFO75030 526 aaPredicted RBP8.53□□□□□ -1.04
RFFL-210ENST00000582308 PTP4A3O75365 173 aa8.53□□□□□ -1.04
RFFL-210ENST00000582308 ADAP00813 363 aa8.53□□□□□ -1.04
RFFL-210ENST00000582308 PRB1P04280 392 aa8.53□□□□□ -1.04
RFFL-210ENST00000582308 TP53P04637 393 aaPredicted RBP8.53□□□□□ -1.04
RFFL-210ENST00000582308 HIST1H2ABP04908 130 aa8.53□□□□□ -1.04
RFFL-210ENST00000582308 ALPLP05186 524 aa8.53□□□□□ -1.04
RFFL-210ENST00000582308 IGFBP1P08833 259 aaPredicted RBP8.53□□□□□ -1.04
RFFL-210ENST00000582308 TSPAN19P0C672 248 aa8.53□□□□□ -1.04
RFFL-210ENST00000582308 EDN3P14138 238 aa8.53□□□□□ -1.04
RFFL-210ENST00000582308 ZNF26P17031 533 aaPredicted RBP8.53□□□□□ -1.04
RFFL-210ENST00000582308 ENPP1P22413 925 aa8.53□□□□□ -1.04
RFFL-210ENST00000582308 SLC9A3P48764 834 aa8.53□□□□□ -1.04
RFFL-210ENST00000582308 FXYD6P3P58550 94 aa8.53□□□□□ -1.04
RFFL-210ENST00000582308 RPS3AP61247 264 aaKnown RBP8.53□□□□□ -1.04
RFFL-210ENST00000582308 CSNK2A1P68400 391 aaPredicted RBP8.53□□□□□ -1.04
RFFL-210ENST00000582308 PMS2P3Q13401 168 aa8.53□□□□□ -1.04
RFFL-210ENST00000582308 DAG1Q14118 895 aa8.53□□□□□ -1.04
RFFL-210ENST00000582308 MFSD13AQ14CX5 517 aa8.53□□□□□ -1.04
RFFL-210ENST00000582308 ZBED5Q49AG3 693 aa8.53□□□□□ -1.04
RFFL-210ENST00000582308 PDSS1Q5T2R2 415 aa8.53□□□□□ -1.04
RFFL-210ENST00000582308 WLSQ5T9L3 541 aa8.53□□□□□ -1.04
RFFL-210ENST00000582308 PAQR6Q6TCH4 344 aa8.53□□□□□ -1.04
RFFL-210ENST00000582308 KLHL17Q6TDP4 642 aa8.53□□□□□ -1.04
RFFL-210ENST00000582308 H1FNTQ75WM6 255 aaPredicted RBP8.53□□□□□ -1.04
RFFL-210ENST00000582308 HIST3H2AQ7L7L0 130 aa8.53□□□□□ -1.04
RFFL-210ENST00000582308 MAMDC2Q7Z304 686 aaPredicted RBP8.53□□□□□ -1.04
RFFL-210ENST00000582308 OAFQ86UD1 273 aa8.53□□□□□ -1.04
RFFL-210ENST00000582308 KIF18BQ86Y91 864 aa8.53□□□□□ -1.04
RFFL-210ENST00000582308 CCDC103Q8IW40 242 aa8.53□□□□□ -1.04
RFFL-210ENST00000582308 PM20D2Q8IYS1 436 aa8.53□□□□□ -1.04
RFFL-210ENST00000582308 TMEM99Q8N816 258 aa8.53□□□□□ -1.04
RFFL-210ENST00000582308 OR5J2Q8NH18 312 aa8.53□□□□□ -1.04
RFFL-210ENST00000582308 OR51A7Q8NH64 312 aa8.53□□□□□ -1.04
RFFL-210ENST00000582308 FAM57AQ8TBR7 257 aa8.53□□□□□ -1.04
RFFL-210ENST00000582308 ZPLD1Q8TCW7 415 aa8.53□□□□□ -1.04
RFFL-210ENST00000582308 ROBO4Q8WZ75 1007 aa8.53□□□□□ -1.04
RFFL-210ENST00000582308 HIST1H2ACQ93077 130 aa8.53□□□□□ -1.04
RFFL-210ENST00000582308 SDCCAG3Q96C92 435 aa8.53□□□□□ -1.04
RFFL-210ENST00000582308 RBM4BQ9BQ04 359 aaKnown RBP8.53□□□□□ -1.04
RFFL-210ENST00000582308 RBM4Q9BWF3 364 aaKnown RBP8.53□□□□□ -1.04
RFFL-210ENST00000582308 TAPBPLQ9BX59 468 aa8.53□□□□□ -1.04
RFFL-210ENST00000582308 UCK2Q9BZX2 261 aa8.53□□□□□ -1.04
RFFL-210ENST00000582308 ENKD1Q9H0I2 346 aa8.53□□□□□ -1.04
RFFL-210ENST00000582308 MCCC2Q9HCC0 563 aa8.53□□□□□ -1.04
RFFL-210ENST00000582308 CHST11Q9NPF2 352 aa8.53□□□□□ -1.04
RFFL-210ENST00000582308 KRCC1Q9NPI7 259 aaPredicted RBP8.53□□□□□ -1.04
RFFL-210ENST00000582308 TIGARQ9NQ88 270 aa8.53□□□□□ -1.04
RFFL-210ENST00000582308 MRPL39Q9NYK5 338 aaKnown RBP8.53□□□□□ -1.04
RFFL-210ENST00000582308 USE1Q9NZ43 259 aa8.53□□□□□ -1.04
RFFL-210ENST00000582308 REV1Q9UBZ9 1251 aa8.53□□□□□ -1.04
RFFL-210ENST00000582308 SIGLEC7Q9Y286 467 aa8.53□□□□□ -1.04
RFFL-210ENST00000582308 ZNF835Q9Y2P0 537 aa8.53□□□□□ -1.04
RFFL-210ENST00000582308 CORINQ9Y5Q5 1042 aa8.53□□□□□ -1.04
RFFL-210ENST00000582308 HIVEP3Q5T1R4 2406 aa8.53□□□□□ -1.04
RFFL-210ENST00000582308 DIDO1Q9BTC0 2240 aaKnown RBP8.53□□□□□ -1.04
RFFL-210ENST00000582308 SMG1Q96Q15 3661 aaKnown RBP8.52□□□□□ -1.05
RFFL-210ENST00000582308 IGHV3-15A0A0B4J1V0 119 aa8.52□□□□□ -1.05
RFFL-210ENST00000582308 AQP7P3A6NL99 342 aa8.52□□□□□ -1.05
RFFL-210ENST00000582308 CLCA1A8K7I4 914 aa8.52□□□□□ -1.05
RFFL-210ENST00000582308 AHRRA9YTQ3 701 aa8.52□□□□□ -1.05
RFFL-210ENST00000582308 MS4A18H0YCH9 400 aa8.52□□□□□ -1.05
RFFL-210ENST00000582308 BLOC1S5-TXNDC5H3BN57 136 aa8.52□□□□□ -1.05
RFFL-210ENST00000582308 SMAD9O15198 467 aaKnown RBP8.52□□□□□ -1.05
RFFL-210ENST00000582308 EIF1BO60739 113 aaKnown RBP8.52□□□□□ -1.05
RFFL-210ENST00000582308 AQP8O94778 261 aa8.52□□□□□ -1.05
RFFL-210ENST00000582308 HPRP00739 348 aa8.52□□□□□ -1.05
RFFL-210ENST00000582308 TPOP07202 933 aa8.52□□□□□ -1.05
RFFL-210ENST00000582308 UQCRC1P31930 480 aa8.52□□□□□ -1.05
RFFL-210ENST00000582308 AQP2P41181 271 aa8.52□□□□□ -1.05
RFFL-210ENST00000582308 PTDSS1P48651 473 aaKnown RBP8.52□□□□□ -1.05
RFFL-210ENST00000582308 ALDH3A2P51648 485 aa8.52□□□□□ -1.05
RFFL-210ENST00000582308 NUP107P57740 925 aa8.52□□□□□ -1.05
RFFL-210ENST00000582308 RPS4XP62701 263 aaKnown RBP8.52□□□□□ -1.05
RFFL-210ENST00000582308 COX10Q12887 443 aa8.52□□□□□ -1.05
RFFL-210ENST00000582308 SGCBQ16585 318 aa8.52□□□□□ -1.05
RFFL-210ENST00000582308 ZNF239Q16600 458 aaKnown RBP8.52□□□□□ -1.05
RFFL-210ENST00000582308 MS4A18Q3C1V0 323 aa8.52□□□□□ -1.05
RFFL-210ENST00000582308 SOWAHCQ53LP3 525 aaPredicted RBP8.52□□□□□ -1.05
RFFL-210ENST00000582308 ZNF585AQ6P3V2 769 aa8.52□□□□□ -1.05
RFFL-210ENST00000582308 THSD4Q6ZMP0 1018 aa8.52□□□□□ -1.05
RFFL-210ENST00000582308 ZNF620Q6ZNG0 422 aa8.52□□□□□ -1.05
RFFL-210ENST00000582308 Q6ZPB1 254 aaPredicted RBP8.52□□□□□ -1.05
RFFL-210ENST00000582308 RASSF6Q6ZTQ3 369 aa8.52□□□□□ -1.05
RFFL-210ENST00000582308 NANOGNBQ7Z5D8 188 aa8.52□□□□□ -1.05
RFFL-210ENST00000582308 GALNT5Q7Z7M9 940 aa8.52□□□□□ -1.05
RFFL-210ENST00000582308 ADGRE4PQ86SQ3 457 aa8.52□□□□□ -1.05
RFFL-210ENST00000582308 CD163Q86VB7 1156 aa8.52□□□□□ -1.05
RFFL-210ENST00000582308 KDM8Q8N371 416 aa8.52□□□□□ -1.05
RFFL-210ENST00000582308 GALNT4Q8N4A0 578 aa8.52□□□□□ -1.05
RFFL-210ENST00000582308 SCAIQ8N9R8 606 aa8.52□□□□□ -1.05
RFFL-210ENST00000582308 ST6GALNAC3Q8NDV1 305 aa8.52□□□□□ -1.05
RFFL-210ENST00000582308 ADPRHL1Q8NDY3 354 aa8.52□□□□□ -1.05
RFFL-210ENST00000582308 MOSPD2Q8NHP6 518 aa8.52□□□□□ -1.05
RFFL-210ENST00000582308 FNDC9Q8TBE3 224 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms