RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	EPYC	Q99645	322 aa		11.09	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	SLCO5A1	Q9H2Y9	848 aa		11.09	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	TMEM27	Q9HBJ8	222 aa		11.09	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	OBP2B	Q9NPH6	170 aa		11.09	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	RCE1	Q9Y256	329 aa		11.09	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	AMDHD2	Q9Y303	409 aa		11.09	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	CORIN	Q9Y5Q5	1042 aa		11.09	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	TRAV36DV7	A0A075B6V5	113 aa		11.08	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708		A0A1B0GWA3	101 aa		11.08	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	DPRX	A6NFQ7	191 aa		11.08	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	BBIP1	A8MTZ0	92 aa		11.08	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	AIM2	O14862	343 aa		11.08	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	SLC22A2	O15244	555 aa		11.08	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	GTF2E2	P29084	291 aa	Known RBP	11.08	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	ARFIP2	P53365	341 aa		11.08	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	RGS8	P57771	180 aa	Predicted RBP	11.08	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	EGR4	Q05215	589 aa		11.08	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	BSPH1	Q075Z2	132 aa		11.08	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	BNIP2	Q12982	314 aa		11.08	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	STK11	Q15831	433 aa		11.08	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	ZNF672	Q499Z4	452 aa	Predicted RBP	11.08	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	ALG10B	Q5I7T1	473 aa		11.08	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	ZNF613	Q6PF04	617 aa		11.08	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	BIVM	Q86UB2	503 aa		11.08	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	GPAT4	Q86UL3	456 aa		11.08	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	PTOV1	Q86YD1	416 aa		11.08	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	KRTAP1-3	Q8IUG1	177 aa		11.08	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	WFDC11	Q8NEX6	87 aa		11.08	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	OR8J3	Q8NGG0	315 aa		11.08	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	THOC1	Q96FV9	657 aa	Known RBP	11.08	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	C18orf12	Q96KH6	178 aa		11.08	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	TMEM43	Q9BTV4	400 aa		11.08	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	BDH2	Q9BUT1	245 aa		11.08	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	PTDSS2	Q9BVG9	487 aa		11.08	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	TMEM120A	Q9BXJ8	343 aa		11.08	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	LINC00470	Q9BZP3	86 aa		11.08	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	SLC7A10	Q9NS82	523 aa		11.08	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	FAIM	Q9NVQ4	179 aa		11.08	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	ADPRHL2	Q9NX46	363 aa		11.08	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	SLC25A15	Q9Y619	301 aa		11.08	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	CAD	P27708	2225 aa		11.07	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708		A0A087WUJ7	227 aa		11.07	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708		A0A0B4J2E0	115 aa		11.07	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708		A0A1B0GX12	115 aa		11.07	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	CLOCK	O15516	846 aa		11.07	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	ATP8B1	O43520	1251 aa		11.07	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	AKAP8	O43823	692 aa	Known RBP	11.07	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	TPST1	O60507	370 aa		11.07	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	RAD51D	O75771	328 aa		11.07	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	LGI1	O95970	557 aa		11.07	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	WNT11	O96014	354 aa		11.07	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	PLAU	P00749	431 aa		11.07	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	ITGA5	P08648	1049 aa		11.07	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	HOXB1	P14653	301 aa	Predicted RBP	11.07	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	HTR2A	P28223	471 aa		11.07	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	PCGF2	P35227	344 aa		11.07	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	PTH2R	P49190	550 aa		11.07	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	SH3BGR	P55822	239 aa	Predicted RBP	11.07	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	RPS4X	P62701	263 aa	Known RBP	11.07	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708		Q5PR19	223 aa		11.07	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	TSPO2	Q5TGU0	170 aa		11.07	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	ALKBH2	Q6NS38	261 aa		11.07	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	H1FNT	Q75WM6	255 aa	Predicted RBP	11.07	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	DEPDC4	Q8N2C3	294 aa		11.07	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	SCAI	Q8N9R8	606 aa		11.07	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	PCYOX1L	Q8NBM8	494 aa		11.07	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	LILRB1	Q8NHL6	650 aa	Predicted RBP	11.07	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	SMAP2	Q8WU79	429 aa	Predicted RBP	11.07	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	GTPBP3	Q969Y2	492 aa	Known RBP	11.07	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	KTI12	Q96EK9	354 aa	Predicted RBP	11.07	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	DNAJA3	Q96EY1	480 aa		11.07	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	TRMT61A	Q96FX7	289 aa	Known RBP	11.07	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	OXGR1	Q96P68	337 aa		11.07	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	ARHGDIG	Q99819	225 aa		11.07	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	RSPO3	Q9BXY4	272 aa	Predicted RBP	11.07	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	SLC17A5	Q9NRA2	495 aa		11.07	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	ZNF446	Q9NWS9	450 aa		11.07	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	NSD1	Q96L73	2696 aa	Predicted RBP	11.07	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	ZNF587B	E7ETH6	402 aa		11.06	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	RPL36A-HNRNPH2	H7BZ11	118 aa		11.06	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708		M0QX08	132 aa		11.06	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	OVOL3	O00110	214 aa		11.06	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	KRT33A	O76009	404 aa		11.06	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	MT-ATP6	P00846	226 aa		11.06	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	IGHV3-9	P01782	118 aa		11.06	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	DANCR	P0C864	163 aa		11.06	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	ZNF43	P17038	809 aa		11.06	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	AQP1	P29972	269 aa		11.06	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	RPS5	P46782	204 aa	Known RBP	11.06	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	MTPN	P58546	118 aa		11.06	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	PRPS1	P60891	318 aa		11.06	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	HOXC5	Q00444	222 aa		11.06	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	DMTN	Q08495	405 aa		11.06	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	VEZF1	Q14119	521 aa		11.06	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	OR1Q1	Q15612	314 aa		11.06	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	NRF1	Q16656	503 aa		11.06	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	MMEL1	Q495T6	779 aa		11.06	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	NANOGP8	Q6NSW7	305 aa		11.06	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	ERICH5	Q6P6B1	374 aa		11.06	□□□□□ -0.64
CDK5RAP3-222	ENST00000581708	CCDC80	Q76M96	950 aa		11.06	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms