RNA–Protein interactions for RNA: ENST00000581226.1

SMCHD1-204, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-204ENST00000581226 MBLAC1A4D2B0 266 aaPredicted RBP2.77□□□□□ -1.97
SMCHD1-204ENST00000581226 ANGPT2O15123 496 aa2.77□□□□□ -1.97
SMCHD1-204ENST00000581226 RIPK2O43353 540 aa2.77□□□□□ -1.97
SMCHD1-204ENST00000581226 IQCF3P0C7M6 154 aa2.77□□□□□ -1.97
SMCHD1-204ENST00000581226 PNMA6AP0CW24 399 aaPredicted RBP2.77□□□□□ -1.97
SMCHD1-204ENST00000581226 HSMCR30P0CW71 290 aa2.77□□□□□ -1.97
SMCHD1-204ENST00000581226 ABOP16442 354 aa2.77□□□□□ -1.97
SMCHD1-204ENST00000581226 HNF1AP20823 631 aa2.77□□□□□ -1.97
SMCHD1-204ENST00000581226 HNRNPA2B1P22626 353 aaKnown RBP2.77□□□□□ -1.97
SMCHD1-204ENST00000581226 HMGB2P26583 209 aaKnown RBP2.77□□□□□ -1.97
SMCHD1-204ENST00000581226 LINC00315P59091 139 aa2.77□□□□□ -1.97
SMCHD1-204ENST00000581226 C1orf61Q13536 156 aa2.77□□□□□ -1.97
SMCHD1-204ENST00000581226 PSG5Q15238 335 aa2.77□□□□□ -1.97
SMCHD1-204ENST00000581226 GPR157Q5UAW9 335 aa2.77□□□□□ -1.97
SMCHD1-204ENST00000581226 OR52E8Q6IFG1 317 aa2.77□□□□□ -1.97
SMCHD1-204ENST00000581226 ZNF620Q6ZNG0 422 aa2.77□□□□□ -1.97
SMCHD1-204ENST00000581226 PGAP1Q75T13 922 aa2.77□□□□□ -1.97
SMCHD1-204ENST00000581226 C6orf120Q7Z4R8 191 aa2.77□□□□□ -1.97
SMCHD1-204ENST00000581226 TMEM123Q8N131 208 aa2.77□□□□□ -1.97
SMCHD1-204ENST00000581226 GMCL1P1Q8NEA9 526 aa2.77□□□□□ -1.97
SMCHD1-204ENST00000581226 DUSP18Q8NEJ0 188 aa2.77□□□□□ -1.97
SMCHD1-204ENST00000581226 TRMT10AQ8TBZ6 339 aaKnown RBP2.77□□□□□ -1.97
SMCHD1-204ENST00000581226 ACER1Q8TDN7 264 aa2.77□□□□□ -1.97
SMCHD1-204ENST00000581226 RNF167Q9H6Y7 350 aa2.77□□□□□ -1.97
SMCHD1-204ENST00000581226 THUMPD1Q9NXG2 353 aaKnown RBP2.77□□□□□ -1.97
SMCHD1-204ENST00000581226 SLC25A37Q9NYZ2 338 aa2.77□□□□□ -1.97
SMCHD1-204ENST00000581226 PIPOXQ9P0Z9 390 aa2.77□□□□□ -1.97
SMCHD1-204ENST00000581226 SEC14L3Q9UDX4 400 aa2.77□□□□□ -1.97
SMCHD1-204ENST00000581226 MRPS33Q9Y291 106 aaKnown RBP2.77□□□□□ -1.97
SMCHD1-204ENST00000581226 IGLV4-69A0A075B6H9 119 aa2.76□□□□□ -1.97
SMCHD1-204ENST00000581226 METTL21EPA6NDL7 271 aa2.76□□□□□ -1.97
SMCHD1-204ENST00000581226 LOC110117498-PIK3R3F6TDL0 507 aa2.76□□□□□ -1.97
SMCHD1-204ENST00000581226 PRRG1O14668 218 aa2.76□□□□□ -1.97
SMCHD1-204ENST00000581226 ATP5LO75964 103 aa2.76□□□□□ -1.97
SMCHD1-204ENST00000581226 PCMT1P22061 227 aa2.76□□□□□ -1.97
SMCHD1-204ENST00000581226 PSMA5P28066 241 aa2.76□□□□□ -1.97
SMCHD1-204ENST00000581226 DDOSTP39656 456 aa2.76□□□□□ -1.97
SMCHD1-204ENST00000581226 ARFIP1P53367 373 aa2.76□□□□□ -1.97
SMCHD1-204ENST00000581226 PFN3P60673 137 aa2.76□□□□□ -1.97
SMCHD1-204ENST00000581226 TNFRSF17Q02223 184 aa2.76□□□□□ -1.97
SMCHD1-204ENST00000581226 OXA1LQ15070 435 aa2.76□□□□□ -1.97
SMCHD1-204ENST00000581226 PTGES3Q15185 160 aaKnown RBP2.76□□□□□ -1.97
SMCHD1-204ENST00000581226 TAF7Q15545 349 aaPredicted RBP2.76□□□□□ -1.97
SMCHD1-204ENST00000581226 ZFP2Q6ZN57 461 aa2.76□□□□□ -1.97
SMCHD1-204ENST00000581226 ZNF621Q6ZSS3 439 aa2.76□□□□□ -1.97
SMCHD1-204ENST00000581226 FAM133AQ8N9E0 248 aa2.76□□□□□ -1.97
SMCHD1-204ENST00000581226 NPBQ8NG41 125 aa2.76□□□□□ -1.97
SMCHD1-204ENST00000581226 OR2T3Q8NH03 318 aa2.76□□□□□ -1.97
SMCHD1-204ENST00000581226 TTC25Q96NG3 672 aa2.76□□□□□ -1.97
SMCHD1-204ENST00000581226 RNF2Q99496 336 aa2.76□□□□□ -1.97
SMCHD1-204ENST00000581226 ERP44Q9BS26 406 aa2.76□□□□□ -1.97
SMCHD1-204ENST00000581226 LRRN3Q9H3W5 708 aa2.76□□□□□ -1.97
SMCHD1-204ENST00000581226 CCL28Q9NRJ3 127 aa2.76□□□□□ -1.97
SMCHD1-204ENST00000581226 QPCTLQ9NXS2 382 aa2.76□□□□□ -1.97
SMCHD1-204ENST00000581226 KCNIP1Q9NZI2 227 aa2.76□□□□□ -1.97
SMCHD1-204ENST00000581226 STOX2Q9P2F5 926 aaPredicted RBP2.76□□□□□ -1.97
SMCHD1-204ENST00000581226 DEC1Q9P2X7 70 aa2.76□□□□□ -1.97
SMCHD1-204ENST00000581226 TRAPPC4Q9Y296 219 aa2.76□□□□□ -1.97
SMCHD1-204ENST00000581226 TIMM10BQ9Y5J6 103 aa2.76□□□□□ -1.97
SMCHD1-204ENST00000581226 SLC25A15Q9Y619 301 aa2.76□□□□□ -1.97
SMCHD1-204ENST00000581226 A0A096LNJ9 63 aa2.75□□□□□ -1.97
SMCHD1-204ENST00000581226 K7EQM0 130 aa2.75□□□□□ -1.97
SMCHD1-204ENST00000581226 NDC80O14777 642 aa2.75□□□□□ -1.97
SMCHD1-204ENST00000581226 POLR2DO15514 142 aaKnown RBP2.75□□□□□ -1.97
SMCHD1-204ENST00000581226 OXSR1O95747 527 aaPredicted RBP2.75□□□□□ -1.97
SMCHD1-204ENST00000581226 TDGF1P13385 188 aa2.75□□□□□ -1.97
SMCHD1-204ENST00000581226 HOXA9P31269 272 aa2.75□□□□□ -1.97
SMCHD1-204ENST00000581226 BTCP35070 178 aa2.75□□□□□ -1.97
SMCHD1-204ENST00000581226 RDXP35241 583 aaKnown RBP2.75□□□□□ -1.97
SMCHD1-204ENST00000581226 RPL13AP40429 203 aaKnown RBP2.75□□□□□ -1.97
SMCHD1-204ENST00000581226 SLC26A3P40879 764 aa2.75□□□□□ -1.97
SMCHD1-204ENST00000581226 TDGF1P3P51864 188 aa2.75□□□□□ -1.97
SMCHD1-204ENST00000581226 MADCAM1Q13477 382 aa2.75□□□□□ -1.97
SMCHD1-204ENST00000581226 VGLL4Q14135 290 aa2.75□□□□□ -1.97
SMCHD1-204ENST00000581226 DPYSL2Q16555 572 aa2.75□□□□□ -1.97
SMCHD1-204ENST00000581226 LRRC10Q5BKY1 277 aa2.75□□□□□ -1.97
SMCHD1-204ENST00000581226 CARD16Q5EG05 197 aa2.75□□□□□ -1.97
SMCHD1-204ENST00000581226 PIGGQ5H8A4 983 aa2.75□□□□□ -1.97
SMCHD1-204ENST00000581226 FRMPD2BQ6IN97 320 aa2.75□□□□□ -1.97
SMCHD1-204ENST00000581226 TM4SF19Q96DZ7 209 aa2.75□□□□□ -1.97
SMCHD1-204ENST00000581226 ITCHQ96J02 903 aa2.75□□□□□ -1.97
SMCHD1-204ENST00000581226 ZNF607Q96SK3 696 aa2.75□□□□□ -1.97
SMCHD1-204ENST00000581226 SECISBP2Q96T21 854 aaKnown RBP2.75□□□□□ -1.97
SMCHD1-204ENST00000581226 TMEM246Q9BRR3 403 aa2.75□□□□□ -1.97
SMCHD1-204ENST00000581226 UFSP2Q9NUQ7 469 aa2.75□□□□□ -1.97
SMCHD1-204ENST00000581226 RBAKQ9NYW8 714 aaPredicted RBP2.75□□□□□ -1.97
SMCHD1-204ENST00000581226 SNX6Q9UNH7 406 aa2.75□□□□□ -1.97
SMCHD1-204ENST00000581226 POLDIP2Q9Y2S7 368 aa2.75□□□□□ -1.97
SMCHD1-204ENST00000581226 IGKV2-28A0A075B6P5 120 aa2.74□□□□□ -1.97
SMCHD1-204ENST00000581226 IQANK1A0A1B0GTG1 560 aa2.74□□□□□ -1.97
SMCHD1-204ENST00000581226 TCRBV9S1A1TA0A576 114 aa2.74□□□□□ -1.97
SMCHD1-204ENST00000581226 RBMY1BA6NDE4 496 aaKnown RBP2.74□□□□□ -1.97
SMCHD1-204ENST00000581226 RBMY1EA6NEQ0 496 aaKnown RBP2.74□□□□□ -1.97
SMCHD1-204ENST00000581226 A8MXQ7 604 aa2.74□□□□□ -1.97
SMCHD1-204ENST00000581226 C11orf94C9JXX5 98 aa2.74□□□□□ -1.97
SMCHD1-204ENST00000581226 ARPC3O15145 178 aa2.74□□□□□ -1.97
SMCHD1-204ENST00000581226 ZNF324O75467 553 aaPredicted RBP2.74□□□□□ -1.97
SMCHD1-204ENST00000581226 DIRAS1O95057 198 aa2.74□□□□□ -1.97
SMCHD1-204ENST00000581226 IGKV2D-28P01615 120 aa2.74□□□□□ -1.97
SMCHD1-204ENST00000581226 IGHDP01880 384 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms