RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 C1orf140Q5VVS0 124 aa8.83□□□□□ -1
GGA3-209ENST00000580646 DEF8Q6ZN54 512 aa8.83□□□□□ -1
GGA3-209ENST00000580646 PIWIL3Q7Z3Z3 882 aaKnown RBP8.83□□□□□ -1
GGA3-209ENST00000580646 TSPYL5Q86VY4 417 aaPredicted RBP8.83□□□□□ -1
GGA3-209ENST00000580646 CYP4Z1Q86W10 505 aa8.83□□□□□ -1
GGA3-209ENST00000580646 C9orf106Q8NAJ2 232 aa8.83□□□□□ -1
GGA3-209ENST00000580646 MFSD8Q8NHS3 518 aa8.83□□□□□ -1
GGA3-209ENST00000580646 RNF128Q8TEB7 428 aa8.83□□□□□ -1
GGA3-209ENST00000580646 RNASE6Q93091 150 aaKnown RBP8.83□□□□□ -1
GGA3-209ENST00000580646 ZHX1-C8orf76Q96EF9 292 aa8.83□□□□□ -1
GGA3-209ENST00000580646 LRRC46Q96FV0 321 aa8.83□□□□□ -1
GGA3-209ENST00000580646 SLC41A3Q96GZ6 507 aa8.83□□□□□ -1
GGA3-209ENST00000580646 ZNF845Q96IR2 970 aaPredicted RBP8.83□□□□□ -1
GGA3-209ENST00000580646 CLPTM1LQ96KA5 538 aa8.83□□□□□ -1
GGA3-209ENST00000580646 ARL5BQ96KC2 179 aa8.83□□□□□ -1
GGA3-209ENST00000580646 C7orf34Q96L11 122 aa8.83□□□□□ -1
GGA3-209ENST00000580646 HS6ST2Q96MM7 605 aa8.83□□□□□ -1
GGA3-209ENST00000580646 OR5B2Q96R09 309 aa8.83□□□□□ -1
GGA3-209ENST00000580646 ZNF300Q96RE9 604 aaPredicted RBP8.83□□□□□ -1
GGA3-209ENST00000580646 ARPC5LQ9BPX5 153 aa8.83□□□□□ -1
GGA3-209ENST00000580646 PRR14Q9BWN1 585 aa8.83□□□□□ -1
GGA3-209ENST00000580646 IL1RAPQ9NPH3 570 aa8.83□□□□□ -1
GGA3-209ENST00000580646 RIMS3Q9UJD0 308 aa8.83□□□□□ -1
GGA3-209ENST00000580646 ENPP4Q9Y6X5 453 aa8.83□□□□□ -1
GGA3-209ENST00000580646 DCHS2Q6V1P9 2916 aa8.83□□□□□ -1
GGA3-209ENST00000580646 AKAP9Q99996 3911 aa8.83□□□□□ -1
GGA3-209ENST00000580646 F8P00451 2351 aa8.83□□□□□ -1
GGA3-209ENST00000580646 IGKV1D-42A0A075B6H8 117 aa8.82□□□□□ -1
GGA3-209ENST00000580646 TRAV36DV7A0A075B6V5 113 aa8.82□□□□□ -1
GGA3-209ENST00000580646 ZC3H12DA2A288 527 aaKnown RBP8.82□□□□□ -1
GGA3-209ENST00000580646 LIPT2A6NK58 231 aa8.82□□□□□ -1
GGA3-209ENST00000580646 FTCDNL1E5RQL4 147 aa8.82□□□□□ -1
GGA3-209ENST00000580646 CYTIPO60759 359 aa8.82□□□□□ -1
GGA3-209ENST00000580646 PRSS23O95084 383 aa8.82□□□□□ -1
GGA3-209ENST00000580646 AHSA1O95433 338 aa8.82□□□□□ -1
GGA3-209ENST00000580646 TGM6O95932 706 aa8.82□□□□□ -1
GGA3-209ENST00000580646 MT-ATP6P00846 226 aa8.82□□□□□ -1
GGA3-209ENST00000580646 TMIGD3P0DMS9 266 aaPredicted RBP8.82□□□□□ -1
GGA3-209ENST00000580646 TFPIP10646 304 aa8.82□□□□□ -1
GGA3-209ENST00000580646 TNFRSF1BP20333 461 aa8.82□□□□□ -1
GGA3-209ENST00000580646 ENPP1P22413 925 aa8.82□□□□□ -1
GGA3-209ENST00000580646 OPRM1P35372 400 aa8.82□□□□□ -1
GGA3-209ENST00000580646 KIR2DL3P43628 341 aa8.82□□□□□ -1
GGA3-209ENST00000580646 SNTB1Q13884 538 aaKnown RBP8.82□□□□□ -1
GGA3-209ENST00000580646 IQCCQ4KMZ1 466 aa8.82□□□□□ -1
GGA3-209ENST00000580646 FAM69AQ5T7M9 428 aa8.82□□□□□ -1
GGA3-209ENST00000580646 ABLIM2Q6H8Q1 611 aa8.82□□□□□ -1
GGA3-209ENST00000580646 TTC33Q6PID6 262 aaPredicted RBP8.82□□□□□ -1
GGA3-209ENST00000580646 PAQR6Q6TCH4 344 aa8.82□□□□□ -1
GGA3-209ENST00000580646 FCRLAQ7L513 359 aa8.82□□□□□ -1
GGA3-209ENST00000580646 P4HA3Q7Z4N8 544 aa8.82□□□□□ -1
GGA3-209ENST00000580646 FAM86B1Q8N7N1 296 aa8.82□□□□□ -1
GGA3-209ENST00000580646 PIK3C3Q8NEB9 887 aa8.82□□□□□ -1
GGA3-209ENST00000580646 ATP6V1C2Q8NEY4 427 aa8.82□□□□□ -1
GGA3-209ENST00000580646 FNDC9Q8TBE3 224 aa8.82□□□□□ -1
GGA3-209ENST00000580646 CCDC124Q96CT7 223 aaKnown RBP8.82□□□□□ -1
GGA3-209ENST00000580646 GMPPAQ96IJ6 420 aaPredicted RBP8.82□□□□□ -1
GGA3-209ENST00000580646 LRGUKQ96M69 825 aa8.82□□□□□ -1
GGA3-209ENST00000580646 ZNF347Q96SE7 839 aa8.82□□□□□ -1
GGA3-209ENST00000580646 PRSS27Q9BQR3 290 aa8.82□□□□□ -1
GGA3-209ENST00000580646 PTDSS2Q9BVG9 487 aa8.82□□□□□ -1
GGA3-209ENST00000580646 SFXN3Q9BWM7 321 aa8.82□□□□□ -1
GGA3-209ENST00000580646 TAPBPLQ9BX59 468 aa8.82□□□□□ -1
GGA3-209ENST00000580646 SRXN1Q9BYN0 137 aa8.82□□□□□ -1
GGA3-209ENST00000580646 OR11A1Q9GZK7 315 aa8.82□□□□□ -1
GGA3-209ENST00000580646 NDUFAF4Q9P032 175 aa8.82□□□□□ -1
GGA3-209ENST00000580646 SLC7A8Q9UHI5 535 aa8.82□□□□□ -1
GGA3-209ENST00000580646 FOXD3Q9UJU5 478 aaPredicted RBP8.82□□□□□ -1
GGA3-209ENST00000580646 SLC7A7Q9UM01 511 aa8.82□□□□□ -1
GGA3-209ENST00000580646 POMPQ9Y244 141 aa8.82□□□□□ -1
GGA3-209ENST00000580646 PDZD2O15018 2839 aa8.82□□□□□ -1
GGA3-209ENST00000580646 FREM1Q5H8C1 2179 aa8.82□□□□□ -1
GGA3-209ENST00000580646 IGKV3D-15A0A087WSY6 115 aa8.81□□□□□ -1
GGA3-209ENST00000580646 A0A1W2PRQ8 180 aa8.81□□□□□ -1
GGA3-209ENST00000580646 FFAR1O14842 300 aa8.81□□□□□ -1
GGA3-209ENST00000580646 SMAD9O15198 467 aaKnown RBP8.81□□□□□ -1
GGA3-209ENST00000580646 SS18L1O75177 396 aaPredicted RBP8.81□□□□□ -1
GGA3-209ENST00000580646 VAMP5O95183 116 aa8.81□□□□□ -1
GGA3-209ENST00000580646 OPN1LWP04000 364 aa8.81□□□□□ -1
GGA3-209ENST00000580646 FABP3P05413 133 aa8.81□□□□□ -1
GGA3-209ENST00000580646 CCNA2P20248 432 aa8.81□□□□□ -1
GGA3-209ENST00000580646 PCYT1AP49585 367 aa8.81□□□□□ -1
GGA3-209ENST00000580646 SLC16A1P53985 500 aa8.81□□□□□ -1
GGA3-209ENST00000580646 VLDLRP98155 873 aa8.81□□□□□ -1
GGA3-209ENST00000580646 FOXF2Q12947 444 aa8.81□□□□□ -1
GGA3-209ENST00000580646 PIN1Q13526 163 aaPredicted RBP8.81□□□□□ -1
GGA3-209ENST00000580646 DGCR6Q14129 220 aa8.81□□□□□ -1
GGA3-209ENST00000580646 FLOT2Q14254 428 aa8.81□□□□□ -1
GGA3-209ENST00000580646 FAM98BQ52LJ0 330 aaKnown RBP8.81□□□□□ -1
GGA3-209ENST00000580646 PLXDC2Q6UX71 529 aa8.81□□□□□ -1
GGA3-209ENST00000580646 CYP2R1Q6VVX0 501 aa8.81□□□□□ -1
GGA3-209ENST00000580646 WDR88Q6ZMY6 472 aa8.81□□□□□ -1
GGA3-209ENST00000580646 TSEN54Q7Z6J9 526 aaKnown RBP8.81□□□□□ -1
GGA3-209ENST00000580646 CDH24Q86UP0 819 aa8.81□□□□□ -1
GGA3-209ENST00000580646 RNF113BQ8IZP6 322 aaKnown RBP8.81□□□□□ -1
GGA3-209ENST00000580646 SCAIQ8N9R8 606 aa8.81□□□□□ -1
GGA3-209ENST00000580646 ADPRHL1Q8NDY3 354 aa8.81□□□□□ -1
GGA3-209ENST00000580646 PIGXQ8TBF5 258 aa8.81□□□□□ -1
GGA3-209ENST00000580646 LIPHQ8WWY8 451 aa8.81□□□□□ -1
GGA3-209ENST00000580646 INTS12Q96CB8 462 aaKnown RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms