RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 SRSF6Q13247 344 aaKnown RBP11.56□□□□□ -0.56
CDK5RAP3-217ENST00000580287 KRR1Q13601 381 aaKnown RBP11.56□□□□□ -0.56
CDK5RAP3-217ENST00000580287 NXNL2Q5VZ03 156 aa11.56□□□□□ -0.56
CDK5RAP3-217ENST00000580287 C19orf48Q6RUI8 117 aa11.56□□□□□ -0.56
CDK5RAP3-217ENST00000580287 PHC2Q8IXK0 858 aa11.56□□□□□ -0.56
CDK5RAP3-217ENST00000580287 CDK20Q8IZL9 346 aa11.56□□□□□ -0.56
CDK5RAP3-217ENST00000580287 OR52L1Q8NGH7 329 aa11.56□□□□□ -0.56
CDK5RAP3-217ENST00000580287 PRR7Q8TB68 274 aa11.56□□□□□ -0.56
CDK5RAP3-217ENST00000580287 CEP19Q96LK0 163 aa11.56□□□□□ -0.56
CDK5RAP3-217ENST00000580287 PRSS27Q9BQR3 290 aa11.56□□□□□ -0.56
CDK5RAP3-217ENST00000580287 RACGAP1Q9H0H5 632 aa11.56□□□□□ -0.56
CDK5RAP3-217ENST00000580287 OR52D1Q9H346 318 aa11.56□□□□□ -0.56
CDK5RAP3-217ENST00000580287 TMEM27Q9HBJ8 222 aa11.56□□□□□ -0.56
CDK5RAP3-217ENST00000580287 ANKRD10Q9NXR5 420 aa11.56□□□□□ -0.56
CDK5RAP3-217ENST00000580287 TESQ9UGI8 421 aaKnown RBP11.56□□□□□ -0.56
CDK5RAP3-217ENST00000580287 PPIEQ9UNP9 301 aaKnown RBP11.56□□□□□ -0.56
CDK5RAP3-217ENST00000580287 CDH10Q9Y6N8 788 aa11.56□□□□□ -0.56
CDK5RAP3-217ENST00000580287 NSG1A0A0A6YYJ2 146 aa11.55□□□□□ -0.56
CDK5RAP3-217ENST00000580287 OR6C76A6NM76 312 aa11.55□□□□□ -0.56
CDK5RAP3-217ENST00000580287 NOTOA8MTQ0 251 aa11.55□□□□□ -0.56
CDK5RAP3-217ENST00000580287 CENPBD1B2RD01 187 aa11.55□□□□□ -0.56
CDK5RAP3-217ENST00000580287 B4DXG7 233 aa11.55□□□□□ -0.56
CDK5RAP3-217ENST00000580287 GTPBP1O00178 669 aaKnown RBP11.55□□□□□ -0.56
CDK5RAP3-217ENST00000580287 TO15178 435 aa11.55□□□□□ -0.56
CDK5RAP3-217ENST00000580287 ZFAND5O76080 213 aa11.55□□□□□ -0.56
CDK5RAP3-217ENST00000580287 CDRT1O95170 752 aa11.55□□□□□ -0.56
CDK5RAP3-217ENST00000580287 BMP7P18075 431 aa11.55□□□□□ -0.56
CDK5RAP3-217ENST00000580287 MAKP20794 623 aa11.55□□□□□ -0.56
CDK5RAP3-217ENST00000580287 SLC16A1P53985 500 aa11.55□□□□□ -0.56
CDK5RAP3-217ENST00000580287 DEFA1P59665 94 aa11.55□□□□□ -0.56
CDK5RAP3-217ENST00000580287 DEFA3P59666 94 aa11.55□□□□□ -0.56
CDK5RAP3-217ENST00000580287 RPS15P62841 145 aaKnown RBP11.55□□□□□ -0.56
CDK5RAP3-217ENST00000580287 EFNB1P98172 346 aa11.55□□□□□ -0.56
CDK5RAP3-217ENST00000580287 NHLH1Q02575 133 aa11.55□□□□□ -0.56
CDK5RAP3-217ENST00000580287 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.55□□□□□ -0.56
CDK5RAP3-217ENST00000580287 RAB40BQ12829 278 aa11.55□□□□□ -0.56
CDK5RAP3-217ENST00000580287 INPP5JQ15735 1006 aaPredicted RBP11.55□□□□□ -0.56
CDK5RAP3-217ENST00000580287 TOMM34Q15785 309 aaPredicted RBP11.55□□□□□ -0.56
CDK5RAP3-217ENST00000580287 BAK1Q16611 211 aa11.55□□□□□ -0.56
CDK5RAP3-217ENST00000580287 CPOQ8IVL8 374 aa11.55□□□□□ -0.56
CDK5RAP3-217ENST00000580287 ASCC1Q8N9N2 400 aaKnown RBP11.55□□□□□ -0.56
CDK5RAP3-217ENST00000580287 OR51A7Q8NH64 312 aa11.55□□□□□ -0.56
CDK5RAP3-217ENST00000580287 ELP5Q8TE02 316 aa11.55□□□□□ -0.56
CDK5RAP3-217ENST00000580287 RFKQ969G6 155 aa11.55□□□□□ -0.56
CDK5RAP3-217ENST00000580287 SNX18Q96RF0 628 aa11.55□□□□□ -0.56
CDK5RAP3-217ENST00000580287 DLL3Q9NYJ7 618 aa11.55□□□□□ -0.56
CDK5RAP3-217ENST00000580287 NPAP1Q9NZP6 1156 aa11.55□□□□□ -0.56
CDK5RAP3-217ENST00000580287 SSR3Q9UNL2 185 aa11.55□□□□□ -0.56
CDK5RAP3-217ENST00000580287 HRH3Q9Y5N1 445 aa11.55□□□□□ -0.56
CDK5RAP3-217ENST00000580287 HEATR5AQ86XA9 2040 aa11.55□□□□□ -0.56
CDK5RAP3-217ENST00000580287 A0A1B0GWA3 101 aa11.55□□□□□ -0.56
CDK5RAP3-217ENST00000580287 DLL1O00548 723 aa11.55□□□□□ -0.56
CDK5RAP3-217ENST00000580287 RAD1O60671 282 aa11.55□□□□□ -0.56
CDK5RAP3-217ENST00000580287 LALBAP00709 142 aa11.55□□□□□ -0.56
CDK5RAP3-217ENST00000580287 APOA1P02647 267 aa11.55□□□□□ -0.56
CDK5RAP3-217ENST00000580287 HTR3AP46098 478 aa11.55□□□□□ -0.56
CDK5RAP3-217ENST00000580287 WNT4P56705 351 aa11.55□□□□□ -0.56
CDK5RAP3-217ENST00000580287 MLLT11Q13015 90 aaPredicted RBP11.55□□□□□ -0.56
CDK5RAP3-217ENST00000580287 SLC25A30Q5SVS4 291 aa11.55□□□□□ -0.56
CDK5RAP3-217ENST00000580287 ATP1A1-AS1Q5TC04 95 aa11.55□□□□□ -0.56
CDK5RAP3-217ENST00000580287 FNDC7Q5VTL7 733 aa11.55□□□□□ -0.56
CDK5RAP3-217ENST00000580287 B3GNTL1Q67FW5 361 aaPredicted RBP11.55□□□□□ -0.56
CDK5RAP3-217ENST00000580287 ZNF544Q6NX49 715 aa11.55□□□□□ -0.56
CDK5RAP3-217ENST00000580287 NRARPQ7Z6K4 114 aa11.55□□□□□ -0.56
CDK5RAP3-217ENST00000580287 UBQLNLQ8IYU4 475 aa11.55□□□□□ -0.56
CDK5RAP3-217ENST00000580287 IL22RA1Q8N6P7 574 aa11.55□□□□□ -0.56
CDK5RAP3-217ENST00000580287 POGLUT1Q8NBL1 392 aa11.55□□□□□ -0.56
CDK5RAP3-217ENST00000580287 OR10G3Q8NGC4 313 aa11.55□□□□□ -0.56
CDK5RAP3-217ENST00000580287 OR13C2Q8NGS9 318 aa11.55□□□□□ -0.56
CDK5RAP3-217ENST00000580287 ZNF700Q9H0M5 742 aa11.55□□□□□ -0.56
CDK5RAP3-217ENST00000580287 UBQLN3Q9H347 655 aa11.55□□□□□ -0.56
CDK5RAP3-217ENST00000580287 MED20Q9H944 212 aa11.55□□□□□ -0.56
CDK5RAP3-217ENST00000580287 DDX28Q9NUL7 540 aaKnown RBP11.55□□□□□ -0.56
CDK5RAP3-217ENST00000580287 SEC14L4Q9UDX3 406 aa11.55□□□□□ -0.56
CDK5RAP3-217ENST00000580287 STUB1Q9UNE7 303 aa11.55□□□□□ -0.56
CDK5RAP3-217ENST00000580287 BOD1L1Q8NFC6 3051 aa11.54□□□□□ -0.56
CDK5RAP3-217ENST00000580287 CEP295Q9C0D2 2601 aa11.54□□□□□ -0.56
CDK5RAP3-217ENST00000580287 TRAV27A0A087WT01 109 aa11.54□□□□□ -0.56
CDK5RAP3-217ENST00000580287 ZC3H12DA2A288 527 aaKnown RBP11.54□□□□□ -0.56
CDK5RAP3-217ENST00000580287 SLC35F4A4IF30 521 aa11.54□□□□□ -0.56
CDK5RAP3-217ENST00000580287 TFECO14948 347 aaPredicted RBP11.54□□□□□ -0.56
CDK5RAP3-217ENST00000580287 HCRTR2O43614 444 aa11.54□□□□□ -0.56
CDK5RAP3-217ENST00000580287 ITGA10O75578 1167 aa11.54□□□□□ -0.56
CDK5RAP3-217ENST00000580287 LYPD3O95274 346 aa11.54□□□□□ -0.56
CDK5RAP3-217ENST00000580287 F10P00742 488 aa11.54□□□□□ -0.56
CDK5RAP3-217ENST00000580287 TBXA2RP21731 343 aa11.54□□□□□ -0.56
CDK5RAP3-217ENST00000580287 PSMD4P55036 377 aaKnown RBP11.54□□□□□ -0.56
CDK5RAP3-217ENST00000580287 NRG3P56975 720 aa11.54□□□□□ -0.56
CDK5RAP3-217ENST00000580287 ARPC4P59998 168 aa11.54□□□□□ -0.56
CDK5RAP3-217ENST00000580287 RPS25P62851 125 aaKnown RBP11.54□□□□□ -0.56
CDK5RAP3-217ENST00000580287 KLHL12Q53G59 568 aa11.54□□□□□ -0.56
CDK5RAP3-217ENST00000580287 PLBD1Q6P4A8 553 aa11.54□□□□□ -0.56
CDK5RAP3-217ENST00000580287 POMZP3Q6PJE2 187 aa11.54□□□□□ -0.56
CDK5RAP3-217ENST00000580287 CCDC190Q86UF4 302 aa11.54□□□□□ -0.56
CDK5RAP3-217ENST00000580287 SIRT6Q8N6T7 355 aa11.54□□□□□ -0.56
CDK5RAP3-217ENST00000580287 TOR1AIP2Q8NFQ8 470 aa11.54□□□□□ -0.56
CDK5RAP3-217ENST00000580287 NUBPLQ8TB37 319 aa11.54□□□□□ -0.56
CDK5RAP3-217ENST00000580287 DUSP19Q8WTR2 217 aa11.54□□□□□ -0.56
CDK5RAP3-217ENST00000580287 ASB15Q8WXK1 588 aa11.54□□□□□ -0.56
CDK5RAP3-217ENST00000580287 BPIFA2Q96DR5 249 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms