RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 SLC9A3P48764 834 aa14.22□□□□□ -0.13
CSNK1D-212ENST00000580061 P2RY4P51582 365 aa14.22□□□□□ -0.13
CSNK1D-212ENST00000580061 NUP107P57740 925 aa14.22□□□□□ -0.13
CSNK1D-212ENST00000580061 TSPAN31Q12999 210 aa14.22□□□□□ -0.13
CSNK1D-212ENST00000580061 PON3Q15166 354 aa14.22□□□□□ -0.13
CSNK1D-212ENST00000580061 SF3B4Q15427 424 aaKnown RBP eCLIP14.22□□□□□ -0.134e-13■■■■■ 44.6
CSNK1D-212ENST00000580061 ACSF3Q4G176 576 aaPredicted RBP14.22□□□□□ -0.13
CSNK1D-212ENST00000580061 ANKRD34AQ69YU3 496 aa14.22□□□□□ -0.13
CSNK1D-212ENST00000580061 PLXDC2Q6UX71 529 aa14.22□□□□□ -0.13
CSNK1D-212ENST00000580061 MED12LQ86YW9 2145 aa14.22□□□□□ -0.13
CSNK1D-212ENST00000580061 TMEM99Q8N816 258 aa14.22□□□□□ -0.13
CSNK1D-212ENST00000580061 OR5J2Q8NH18 312 aa14.22□□□□□ -0.13
CSNK1D-212ENST00000580061 ZNF417Q8TAU3 575 aa14.22□□□□□ -0.13
CSNK1D-212ENST00000580061 ROBO4Q8WZ75 1007 aa14.22□□□□□ -0.13
CSNK1D-212ENST00000580061 SDCCAG3Q96C92 435 aa14.22□□□□□ -0.13
CSNK1D-212ENST00000580061 TRIB1Q96RU8 372 aa14.22□□□□□ -0.13
CSNK1D-212ENST00000580061 ZNF587Q96SQ5 575 aaPredicted RBP14.22□□□□□ -0.13
CSNK1D-212ENST00000580061 CIB1Q99828 191 aa14.22□□□□□ -0.13
CSNK1D-212ENST00000580061 NIPSNAP1Q9BPW8 284 aa14.22□□□□□ -0.13
CSNK1D-212ENST00000580061 NAA11Q9BSU3 229 aaPredicted RBP14.22□□□□□ -0.13
CSNK1D-212ENST00000580061 ASPNQ9BXN1 380 aa14.22□□□□□ -0.13
CSNK1D-212ENST00000580061 TP63Q9H3D4 680 aaPredicted RBP14.22□□□□□ -0.13
CSNK1D-212ENST00000580061 CHST11Q9NPF2 352 aa14.22□□□□□ -0.13
CSNK1D-212ENST00000580061 CLCF1Q9UBD9 225 aa14.22□□□□□ -0.13
CSNK1D-212ENST00000580061 RALYQ9UKM9 306 aaKnown RBP14.22□□□□□ -0.13
CSNK1D-212ENST00000580061 MCTS1Q9ULC4 181 aaKnown RBP14.22□□□□□ -0.13
CSNK1D-212ENST00000580061 B3GALT5Q9Y2C3 310 aa14.22□□□□□ -0.13
CSNK1D-212ENST00000580061 ZNF175Q9Y473 711 aa14.22□□□□□ -0.13
CSNK1D-212ENST00000580061 DOCK7Q96N67 2140 aa14.21□□□□□ -0.13
CSNK1D-212ENST00000580061 CD8B2A6NJW9 211 aa14.21□□□□□ -0.13
CSNK1D-212ENST00000580061 AQP7P3A6NL99 342 aa14.21□□□□□ -0.13
CSNK1D-212ENST00000580061 KDM4EB2RXH2 506 aaPredicted RBP14.21□□□□□ -0.13
CSNK1D-212ENST00000580061 PDLIM1O00151 329 aa14.21□□□□□ -0.13
CSNK1D-212ENST00000580061 SYNGR4O95473 234 aa14.21□□□□□ -0.13
CSNK1D-212ENST00000580061 ATP6V1G2O95670 118 aa14.21□□□□□ -0.13
CSNK1D-212ENST00000580061 TGM6O95932 706 aa14.21□□□□□ -0.13
CSNK1D-212ENST00000580061 ADAP00813 363 aa14.21□□□□□ -0.13
CSNK1D-212ENST00000580061 HIST1H2ABP04908 130 aa14.21□□□□□ -0.13
CSNK1D-212ENST00000580061 HOXD4P09016 255 aaPredicted RBP14.21□□□□□ -0.13
CSNK1D-212ENST00000580061 ANXA8P13928 327 aa14.21□□□□□ -0.13
CSNK1D-212ENST00000580061 POU2F1P14859 743 aa14.21□□□□□ -0.13
CSNK1D-212ENST00000580061 ACVR2AP27037 513 aa14.21□□□□□ -0.13
CSNK1D-212ENST00000580061 SLC34A1Q06495 639 aa14.21□□□□□ -0.13
CSNK1D-212ENST00000580061 MRPL49Q13405 166 aaKnown RBP14.21□□□□□ -0.13
CSNK1D-212ENST00000580061 OTUD3Q5T2D3 398 aaPredicted RBP14.21□□□□□ -0.13
CSNK1D-212ENST00000580061 C1orf185Q5T7R7 199 aa14.21□□□□□ -0.13
CSNK1D-212ENST00000580061 RTL6Q6ICC9 239 aa14.21□□□□□ -0.13
CSNK1D-212ENST00000580061 FAHD1Q6P587 224 aa14.21□□□□□ -0.13
CSNK1D-212ENST00000580061 RPTNQ6XPR3 784 aa14.21□□□□□ -0.13
CSNK1D-212ENST00000580061 H1FNTQ75WM6 255 aaPredicted RBP14.21□□□□□ -0.13
CSNK1D-212ENST00000580061 HIST3H2AQ7L7L0 130 aa14.21□□□□□ -0.13
CSNK1D-212ENST00000580061 OAFQ86UD1 273 aa14.21□□□□□ -0.13
CSNK1D-212ENST00000580061 ATG16L2Q8NAA4 619 aa14.21□□□□□ -0.13
CSNK1D-212ENST00000580061 GALNT11Q8NCW6 608 aa14.21□□□□□ -0.13
CSNK1D-212ENST00000580061 ADPRHL1Q8NDY3 354 aa14.21□□□□□ -0.13
CSNK1D-212ENST00000580061 OR13C2Q8NGS9 318 aa14.21□□□□□ -0.13
CSNK1D-212ENST00000580061 FNDC9Q8TBE3 224 aa14.21□□□□□ -0.13
CSNK1D-212ENST00000580061 HIST1H2ACQ93077 130 aa14.21□□□□□ -0.13
CSNK1D-212ENST00000580061 GTPBP3Q969Y2 492 aaKnown RBP14.21□□□□□ -0.13
CSNK1D-212ENST00000580061 CALHM2Q9HA72 323 aa14.21□□□□□ -0.13
CSNK1D-212ENST00000580061 TINAGQ9UJW2 476 aa14.21□□□□□ -0.13
CSNK1D-212ENST00000580061 HIF3AQ9Y2N7 669 aa14.21□□□□□ -0.13
CSNK1D-212ENST00000580061 FAM208BQ5VWN6 2430 aa14.21□□□□□ -0.14
CSNK1D-212ENST00000580061 UNC119BA6NIH7 251 aa14.2□□□□□ -0.14
CSNK1D-212ENST00000580061 SLC22A20A6NK97 555 aa14.2□□□□□ -0.14
CSNK1D-212ENST00000580061 PLPP3O14495 311 aa14.2□□□□□ -0.14
CSNK1D-212ENST00000580061 CASQ2O14958 399 aaPredicted RBP14.2□□□□□ -0.14
CSNK1D-212ENST00000580061 CYTIPO60759 359 aa14.2□□□□□ -0.14
CSNK1D-212ENST00000580061 RAMP1O60894 148 aa14.2□□□□□ -0.14
CSNK1D-212ENST00000580061 PTP4A3O75365 173 aa14.2□□□□□ -0.14
CSNK1D-212ENST00000580061 DAPP51397 102 aa14.2□□□□□ -0.14
CSNK1D-212ENST00000580061 RPS4XP62701 263 aaKnown RBP14.2□□□□□ -0.14
CSNK1D-212ENST00000580061 PPP2R2BQ00005 443 aa14.2□□□□□ -0.14
CSNK1D-212ENST00000580061 PMS2P3Q13401 168 aa14.2□□□□□ -0.14
CSNK1D-212ENST00000580061 FHL1Q13642 323 aa14.2□□□□□ -0.14
CSNK1D-212ENST00000580061 TRIP10Q15642 601 aa14.2□□□□□ -0.14
CSNK1D-212ENST00000580061 ANKDD1AQ495B1 522 aa14.2□□□□□ -0.14
CSNK1D-212ENST00000580061 NSUN5P2Q63ZY6 315 aa14.2□□□□□ -0.14
CSNK1D-212ENST00000580061 ABLIM2Q6H8Q1 611 aa14.2□□□□□ -0.14
CSNK1D-212ENST00000580061 PPP4R4Q6NUP7 873 aa14.2□□□□□ -0.14
CSNK1D-212ENST00000580061 CD300LDQ6UXZ3 194 aa14.2□□□□□ -0.14
CSNK1D-212ENST00000580061 FCRLAQ7L513 359 aa14.2□□□□□ -0.14
CSNK1D-212ENST00000580061 NANOGNBQ7Z5D8 188 aa14.2□□□□□ -0.14
CSNK1D-212ENST00000580061 CCDC103Q8IW40 242 aa14.2□□□□□ -0.14
CSNK1D-212ENST00000580061 OR51A7Q8NH64 312 aa14.2□□□□□ -0.14
CSNK1D-212ENST00000580061 RNF128Q8TEB7 428 aa14.2□□□□□ -0.14
CSNK1D-212ENST00000580061 EME1Q96AY2 570 aa14.2□□□□□ -0.14
CSNK1D-212ENST00000580061 TNFRSF13CQ96RJ3 184 aa14.2□□□□□ -0.14
CSNK1D-212ENST00000580061 C9orf16Q9BUW7 83 aa14.2□□□□□ -0.14
CSNK1D-212ENST00000580061 OSBPL10Q9BXB5 764 aa14.2□□□□□ -0.14
CSNK1D-212ENST00000580061 PRRG4Q9BZD6 226 aa14.2□□□□□ -0.14
CSNK1D-212ENST00000580061 ZNF556Q9HAH1 456 aa14.2□□□□□ -0.14
CSNK1D-212ENST00000580061 SMURF2Q9HAU4 748 aa14.2□□□□□ -0.14
CSNK1D-212ENST00000580061 FANCFQ9NPI8 374 aa14.2□□□□□ -0.14
CSNK1D-212ENST00000580061 TAS2R5Q9NYW4 299 aa14.2□□□□□ -0.14
CSNK1D-212ENST00000580061 SIGLEC7Q9Y286 467 aa14.2□□□□□ -0.14
CSNK1D-212ENST00000580061 FAM215AQ9Y5M1 114 aa14.2□□□□□ -0.14
CSNK1D-212ENST00000580061 CHD6Q8TD26 2715 aa14.2□□□□□ -0.14
CSNK1D-212ENST00000580061 TRAV27A0A087WT01 109 aa14.19□□□□□ -0.14
CSNK1D-212ENST00000580061 A0A1W2PNV4 684 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms