RNA–Protein interactions for RNA: ENST00000578987.1

NUP85-209, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-209ENST00000578987 ETV2O00321 342 aaPredicted RBP3.35□□□□□ -1.87
NUP85-209ENST00000578987 HMGN4O00479 90 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 SDHDO14521 159 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 GPR171O14626 319 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 UBDO15205 165 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 UPK3AO75631 287 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 LGI1O95970 557 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 TGFAP01135 160 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 CHRM4P08173 479 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 KRT16P08779 473 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 CELA3BP08861 270 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 LYNX1P0DP58 116 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 KITP10721 976 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 APEHP13798 732 aaKnown RBP3.35□□□□□ -1.87
NUP85-209ENST00000578987 IDO1P14902 403 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 IL7RP16871 459 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 PRPS1L1P21108 318 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 USF1P22415 310 aaPredicted RBP3.35□□□□□ -1.87
NUP85-209ENST00000578987 CBLP22681 906 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 UQCRC2P22695 453 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 IGFBP5P24593 272 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 EPHA3P29320 983 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 TACR3P29371 465 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 IL12AP29459 219 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 CALCRP30988 508 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 IL2RGP31785 369 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 LSP1P33241 339 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 S100A3P33764 101 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 CHI3L1P36222 383 aaPredicted RBP3.35□□□□□ -1.87
NUP85-209ENST00000578987 CDKN2CP42773 168 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 NR4A2P43354 598 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 MRPL19P49406 292 aaKnown RBP3.35□□□□□ -1.87
NUP85-209ENST00000578987 SELENOPP49908 381 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 PDLIM4P50479 330 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 EFNA4P52798 201 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 AQP5P55064 265 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 DSCR9P59020 149 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 PRPS1P60891 318 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 UFM1P61960 85 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 H3F3AP84243 136 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 VLDLRP98155 873 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 CHRNB3Q05901 458 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 SLC17A1Q14916 467 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 PDK3Q15120 406 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 OR7A5Q15622 319 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 GSTA3Q16772 222 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 ELOA3BQ3SY89 546 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 IQCCQ4KMZ1 466 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 SPANXN4Q5MJ08 99 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 FAM120AOSQ5T036 256 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 OTUD3Q5T2D3 398 aaPredicted RBP3.35□□□□□ -1.87
NUP85-209ENST00000578987 MRPL2Q5T653 305 aaKnown RBP3.35□□□□□ -1.87
NUP85-209ENST00000578987 ATAD3BQ5T9A4 648 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 SAXO2Q658L1 398 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 TMEM225Q6GV28 225 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 ABLIM2Q6H8Q1 611 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 MZT2BQ6NZ67 158 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 NIPAL3Q6P499 406 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 ZNF621Q6ZSS3 439 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 LINGO2Q7L985 606 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 AAED1Q7RTV5 226 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 GRINAQ7Z429 371 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 GPAT4Q86UL3 456 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 MYPOPQ86VE0 399 aaPredicted RBP3.35□□□□□ -1.87
NUP85-209ENST00000578987 RNF130Q86XS8 419 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 VRK2Q86Y07 508 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 ZIC4Q8N9L1 334 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 GLB1L3Q8NCI6 653 aaPredicted RBP3.35□□□□□ -1.87
NUP85-209ENST00000578987 ELOA3Q8NG57 546 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 OR9K2Q8NGE7 335 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 PIGXQ8TBF5 258 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 TSPEARQ8WU66 669 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 PROX1Q92786 737 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 MOAP1Q96BY2 351 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 SLC25A36Q96CQ1 311 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 DDIT4LQ96D03 193 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 MSI2Q96DH6 328 aaKnown RBP3.35□□□□□ -1.87
NUP85-209ENST00000578987 ZHX1-C8orf76Q96EF9 292 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 ZNF837Q96EG3 531 aaPredicted RBP3.35□□□□□ -1.87
NUP85-209ENST00000578987 ZNF385AQ96PM9 386 aaKnown RBP3.35□□□□□ -1.87
NUP85-209ENST00000578987 SLC35A5Q9BS91 424 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 NAA11Q9BSU3 229 aaPredicted RBP3.35□□□□□ -1.87
NUP85-209ENST00000578987 C19orf24Q9BVV8 132 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 GRIP2Q9C0E4 1043 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 NMUR2Q9GZQ4 415 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 ZNF350Q9GZX5 532 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 SLC38A1Q9H2H9 487 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 WDR55Q9H6Y2 383 aaPredicted RBP3.35□□□□□ -1.87
NUP85-209ENST00000578987 SEC61A2Q9H9S3 476 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 FKRPQ9H9S5 495 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 TCF7L2Q9NQB0 619 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 SDR39U1Q9NRG7 319 aaPredicted RBP3.35□□□□□ -1.87
NUP85-209ENST00000578987 SLC6A13Q9NSD5 602 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 EXD2Q9NVH0 621 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 ADPRHL2Q9NX46 363 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 NOP53Q9NZM5 478 aaKnown RBP3.35□□□□□ -1.87
NUP85-209ENST00000578987 EMC3Q9P0I2 261 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 KLHL14Q9P2G3 628 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 MARCOQ9UEW3 520 aaPredicted RBP3.35□□□□□ -1.87
NUP85-209ENST00000578987 CHRNA9Q9UGM1 479 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms