RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 NCOR1P1Q9H4R4 102 aa1.82□□□□□ -2.12
COPS3-213ENST00000577210 SUDS3Q9H7L9 328 aaPredicted RBP1.82□□□□□ -2.12
COPS3-213ENST00000577210 PLGRKTQ9HBL7 147 aa1.82□□□□□ -2.12
COPS3-213ENST00000577210 NEK6Q9HC98 313 aa1.82□□□□□ -2.12
COPS3-213ENST00000577210 MARCH5Q9NX47 278 aa1.82□□□□□ -2.12
COPS3-213ENST00000577210 THUMPD1Q9NXG2 353 aaKnown RBP1.82□□□□□ -2.12
COPS3-213ENST00000577210 ANAPC11Q9NYG5 84 aa1.82□□□□□ -2.12
COPS3-213ENST00000577210 PHF11Q9UIL8 331 aa1.82□□□□□ -2.12
COPS3-213ENST00000577210 ANGPTL2Q9UKU9 493 aa1.82□□□□□ -2.12
COPS3-213ENST00000577210 PACSIN2Q9UNF0 486 aaPredicted RBP1.82□□□□□ -2.12
COPS3-213ENST00000577210 CELA1Q9UNI1 258 aa1.82□□□□□ -2.12
COPS3-213ENST00000577210 ABCG2Q9UNQ0 655 aa1.82□□□□□ -2.12
COPS3-213ENST00000577210 COPS3Q9UNS2 423 aa1.82□□□□□ -2.12
COPS3-213ENST00000577210 N6AMT1Q9Y5N5 214 aa1.82□□□□□ -2.12
COPS3-213ENST00000577210 NINLQ9Y2I6 1382 aa1.82□□□□□ -2.12
COPS3-213ENST00000577210 ARHGAP23Q9P227 1491 aa1.82□□□□□ -2.12
COPS3-213ENST00000577210 IGHV1OR15-1A0A075B7D0 117 aa1.81□□□□□ -2.12
COPS3-213ENST00000577210 ARPC4-TTLL3A0A0A6YYG9 625 aa1.81□□□□□ -2.12
COPS3-213ENST00000577210 LOC100131303A0A0U1RQF7 123 aa1.81□□□□□ -2.12
COPS3-213ENST00000577210 SMCO3A2RU48 225 aa1.81□□□□□ -2.12
COPS3-213ENST00000577210 TUBAL3A6NHL2 446 aa1.81□□□□□ -2.12
COPS3-213ENST00000577210 HIP1O00291 1037 aa1.81□□□□□ -2.12
COPS3-213ENST00000577210 DLGAP1O14490 977 aa1.81□□□□□ -2.12
COPS3-213ENST00000577210 PPP1R2P9O14990 202 aa1.81□□□□□ -2.12
COPS3-213ENST00000577210 MBTPS2O43462 519 aa1.81□□□□□ -2.12
COPS3-213ENST00000577210 PRKAB2O43741 272 aa1.81□□□□□ -2.12
COPS3-213ENST00000577210 CXCL13O43927 109 aa1.81□□□□□ -2.12
COPS3-213ENST00000577210 PRKYO43930 277 aa1.81□□□□□ -2.12
COPS3-213ENST00000577210 RAMP3O60896 148 aa1.81□□□□□ -2.12
COPS3-213ENST00000577210 MMP23AO75900 390 aa1.81□□□□□ -2.12
COPS3-213ENST00000577210 CLDN9O95484 217 aa1.81□□□□□ -2.12
COPS3-213ENST00000577210 ACTL6AO96019 429 aa1.81□□□□□ -2.12
COPS3-213ENST00000577210 SERPIND1P05546 499 aa1.81□□□□□ -2.12
COPS3-213ENST00000577210 OR8U8P0C7N1 319 aa1.81□□□□□ -2.12
COPS3-213ENST00000577210 UBTFL1P0CB47 393 aaPredicted RBP1.81□□□□□ -2.12
COPS3-213ENST00000577210 MCF2P10911 925 aa1.81□□□□□ -2.12
COPS3-213ENST00000577210 IGLL1P15814 213 aa1.81□□□□□ -2.12
COPS3-213ENST00000577210 MGMTP16455 207 aa1.81□□□□□ -2.12
COPS3-213ENST00000577210 ZNF24P17028 368 aa1.81□□□□□ -2.12
COPS3-213ENST00000577210 RFC4P35249 363 aa1.81□□□□□ -2.12
COPS3-213ENST00000577210 LEPP41159 167 aa1.81□□□□□ -2.12
COPS3-213ENST00000577210 OR3A4PP47883 348 aa1.81□□□□□ -2.12
COPS3-213ENST00000577210 OR1G1P47890 313 aa1.81□□□□□ -2.12
COPS3-213ENST00000577210 PRKXP51817 358 aa1.81□□□□□ -2.12
COPS3-213ENST00000577210 CDH6P55285 790 aa1.81□□□□□ -2.12
COPS3-213ENST00000577210 PKNOX1P55347 436 aa1.81□□□□□ -2.12
COPS3-213ENST00000577210 BIDP55957 195 aa1.81□□□□□ -2.12
COPS3-213ENST00000577210 STX17P56962 302 aa1.81□□□□□ -2.12
COPS3-213ENST00000577210 RGS8P57771 180 aaPredicted RBP1.81□□□□□ -2.12
COPS3-213ENST00000577210 KRTAP10-3P60369 221 aa1.81□□□□□ -2.12
COPS3-213ENST00000577210 RPS14P62263 151 aaKnown RBP1.81□□□□□ -2.12
COPS3-213ENST00000577210 CCDC173Q0VFZ6 552 aa1.81□□□□□ -2.12
COPS3-213ENST00000577210 BST2Q10589 180 aaKnown RBP1.81□□□□□ -2.12
COPS3-213ENST00000577210 ASPHQ12797 758 aa1.81□□□□□ -2.12
COPS3-213ENST00000577210 ARFRP1Q13795 201 aa1.81□□□□□ -2.12
COPS3-213ENST00000577210 WDR43Q15061 677 aaKnown RBP eCLIP1.81□□□□□ -2.12
COPS3-213ENST00000577210 OXA1LQ15070 435 aa1.81□□□□□ -2.12
COPS3-213ENST00000577210 MICBQ29980 383 aa1.81□□□□□ -2.12
COPS3-213ENST00000577210 RNF212Q495C1 297 aa1.81□□□□□ -2.12
COPS3-213ENST00000577210 C9orf129Q5T035 196 aaKnown RBP1.81□□□□□ -2.12
COPS3-213ENST00000577210 RAET1LQ5VY80 246 aa1.81□□□□□ -2.12
COPS3-213ENST00000577210 ENPP6Q6UWR7 440 aa1.81□□□□□ -2.12
COPS3-213ENST00000577210 CCDC73Q6ZRK6 1079 aa1.81□□□□□ -2.12
COPS3-213ENST00000577210 EIF3MQ7L2H7 374 aaKnown RBP1.81□□□□□ -2.12
COPS3-213ENST00000577210 ASCL5Q7RTU5 278 aa1.81□□□□□ -2.12
COPS3-213ENST00000577210 H2BFWTQ7Z2G1 175 aa1.81□□□□□ -2.12
COPS3-213ENST00000577210 ZNF589Q86UQ0 364 aaPredicted RBP1.81□□□□□ -2.12
COPS3-213ENST00000577210 PAQR7Q86WK9 346 aa1.81□□□□□ -2.12
COPS3-213ENST00000577210 VRK2Q86Y07 508 aa1.81□□□□□ -2.12
COPS3-213ENST00000577210 EGFL6Q8IUX8 553 aa1.81□□□□□ -2.12
COPS3-213ENST00000577210 PSTKQ8IV42 348 aaKnown RBP1.81□□□□□ -2.12
COPS3-213ENST00000577210 C11orf53Q8IXP5 236 aa1.81□□□□□ -2.12
COPS3-213ENST00000577210 OFCC1Q8IZS5 231 aa1.81□□□□□ -2.12
COPS3-213ENST00000577210 OR2L13Q8N349 312 aa1.81□□□□□ -2.12
COPS3-213ENST00000577210 Q8N7P7 452 aa1.81□□□□□ -2.12
COPS3-213ENST00000577210 LINC01555Q8NAE3 123 aa1.81□□□□□ -2.12
COPS3-213ENST00000577210 BPIFCQ8NFQ6 507 aa1.81□□□□□ -2.12
COPS3-213ENST00000577210 OR4F6Q8NGB9 312 aa1.81□□□□□ -2.12
COPS3-213ENST00000577210 HTR3CQ8WXA8 447 aa1.81□□□□□ -2.12
COPS3-213ENST00000577210 OR1E3Q8WZA6 343 aa1.81□□□□□ -2.12
COPS3-213ENST00000577210 MARC2Q969Z3 335 aa1.81□□□□□ -2.12
COPS3-213ENST00000577210 KIAA1143Q96AT1 154 aaPredicted RBP1.81□□□□□ -2.12
COPS3-213ENST00000577210 SEC22AQ96IW7 307 aa1.81□□□□□ -2.12
COPS3-213ENST00000577210 IFT74Q96LB3 600 aa1.81□□□□□ -2.12
COPS3-213ENST00000577210 ZNF641Q96N77 438 aaPredicted RBP1.81□□□□□ -2.12
COPS3-213ENST00000577210 ZIM3Q96PE6 472 aa1.81□□□□□ -2.12
COPS3-213ENST00000577210 TBX15Q96SF7 602 aa1.81□□□□□ -2.12
COPS3-213ENST00000577210 CNN2Q99439 309 aaKnown RBP1.81□□□□□ -2.12
COPS3-213ENST00000577210 CHP1Q99653 195 aa1.81□□□□□ -2.12
COPS3-213ENST00000577210 MCHR1Q99705 422 aa1.81□□□□□ -2.12
COPS3-213ENST00000577210 EBF4Q9BQW3 602 aa1.81□□□□□ -2.12
COPS3-213ENST00000577210 RAB34Q9BZG1 259 aa1.81□□□□□ -2.12
COPS3-213ENST00000577210 SELENOIQ9C0D9 397 aa1.81□□□□□ -2.12
COPS3-213ENST00000577210 RBKSQ9H477 322 aa1.81□□□□□ -2.12
COPS3-213ENST00000577210 REEP4Q9H6H4 257 aa1.81□□□□□ -2.12
COPS3-213ENST00000577210 TMEM185BQ9H7F4 350 aa1.81□□□□□ -2.12
COPS3-213ENST00000577210 NMRAL1Q9HBL8 299 aa1.81□□□□□ -2.12
COPS3-213ENST00000577210 GCNT4Q9P109 453 aa1.81□□□□□ -2.12
COPS3-213ENST00000577210 WARS2Q9UGM6 360 aaKnown RBP1.81□□□□□ -2.12
COPS3-213ENST00000577210 RIMS3Q9UJD0 308 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms