RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 OR52E1Q8NGJ3 308 aa12.16□□□□□ -0.46
PCDHGB3-201ENST00000576222 OR5K2Q8NHB8 316 aa12.16□□□□□ -0.46
PCDHGB3-201ENST00000576222 ZNF578Q96N58 590 aaPredicted RBP12.16□□□□□ -0.46
PCDHGB3-201ENST00000576222 ISG20L2Q9H9L3 353 aaKnown RBP12.16□□□□□ -0.46
PCDHGB3-201ENST00000576222 ATXN7L1Q9ULK2 861 aaPredicted RBP12.16□□□□□ -0.46
PCDHGB3-201ENST00000576222 CYP8B1Q9UNU6 501 aa12.16□□□□□ -0.46
PCDHGB3-201ENST00000576222 M0QYG6 137 aa12.15□□□□□ -0.46
PCDHGB3-201ENST00000576222 TGM5O43548 720 aa12.15□□□□□ -0.46
PCDHGB3-201ENST00000576222 CPMP14384 443 aa12.15□□□□□ -0.46
PCDHGB3-201ENST00000576222 ITGB7P26010 798 aa12.15□□□□□ -0.46
PCDHGB3-201ENST00000576222 GNRHRP30968 328 aa12.15□□□□□ -0.46
PCDHGB3-201ENST00000576222 PRAMEF8Q5VWM4 474 aa12.15□□□□□ -0.46
PCDHGB3-201ENST00000576222 PRAMEF7Q5VXH5 474 aa12.15□□□□□ -0.46
PCDHGB3-201ENST00000576222 RNF165Q6ZSG1 346 aa12.15□□□□□ -0.46
PCDHGB3-201ENST00000576222 LAS2Q8IYD9 372 aa12.15□□□□□ -0.46
PCDHGB3-201ENST00000576222 FNDC9Q8TBE3 224 aa12.15□□□□□ -0.46
PCDHGB3-201ENST00000576222 SCGB1C1Q8TD33 95 aa12.15□□□□□ -0.46
PCDHGB3-201ENST00000576222 GPR174Q9BXC1 333 aa12.15□□□□□ -0.46
PCDHGB3-201ENST00000576222 NCDNQ9UBB6 729 aa12.15□□□□□ -0.46
PCDHGB3-201ENST00000576222 TRBV5-3A0A0A0MS03 114 aa12.15□□□□□ -0.46
PCDHGB3-201ENST00000576222 SLC22A23A1A5C7 686 aa12.15□□□□□ -0.46
PCDHGB3-201ENST00000576222 TMEM212A6NML5 194 aa12.15□□□□□ -0.46
PCDHGB3-201ENST00000576222 SNRPGP15A8MWD9 76 aa12.15□□□□□ -0.46
PCDHGB3-201ENST00000576222 HOXB5P09067 269 aa12.15□□□□□ -0.46
PCDHGB3-201ENST00000576222 ZDHHC11BP0C7U3 371 aa12.15□□□□□ -0.46
PCDHGB3-201ENST00000576222 CYBAP13498 195 aa12.15□□□□□ -0.46
PCDHGB3-201ENST00000576222 REEP5Q00765 189 aa12.15□□□□□ -0.46
PCDHGB3-201ENST00000576222 TNK1Q13470 666 aa12.15□□□□□ -0.46
PCDHGB3-201ENST00000576222 SNTB1Q13884 538 aaKnown RBP12.15□□□□□ -0.46
PCDHGB3-201ENST00000576222 FAAP20Q6NZ36 180 aa12.15□□□□□ -0.46
PCDHGB3-201ENST00000576222 SGPP2Q8IWX5 399 aa12.15□□□□□ -0.46
PCDHGB3-201ENST00000576222 OR8D4Q8NGM9 314 aa12.15□□□□□ -0.46
PCDHGB3-201ENST00000576222 OR13C5Q8NGS8 318 aa12.15□□□□□ -0.46
PCDHGB3-201ENST00000576222 CASD1Q96PB1 797 aa12.15□□□□□ -0.46
PCDHGB3-201ENST00000576222 HIST1H2AAQ96QV6 131 aa12.15□□□□□ -0.46
PCDHGB3-201ENST00000576222 ZFYVE21Q9BQ24 234 aa12.15□□□□□ -0.46
PCDHGB3-201ENST00000576222 PARPBPQ9NWS1 579 aa12.15□□□□□ -0.46
PCDHGB3-201ENST00000576222 CBLCQ9ULV8 474 aa12.15□□□□□ -0.46
PCDHGB3-201ENST00000576222 ATG4BQ9Y4P1 393 aa12.15□□□□□ -0.46
PCDHGB3-201ENST00000576222 ARID1AO14497 2285 aa12.15□□□□□ -0.46
PCDHGB3-201ENST00000576222 EIF2S3P41091 472 aaKnown RBP12.15□□□□□ -0.46
PCDHGB3-201ENST00000576222 MMP15P51511 669 aa12.15□□□□□ -0.46
PCDHGB3-201ENST00000576222 UBE2MP61081 183 aaKnown RBP12.15□□□□□ -0.46
PCDHGB3-201ENST00000576222 SLC9A3R2Q15599 337 aa12.15□□□□□ -0.46
PCDHGB3-201ENST00000576222 LIMS2Q7Z4I7 341 aa12.15□□□□□ -0.46
PCDHGB3-201ENST00000576222 OR10Z1Q8NGY1 313 aa12.15□□□□□ -0.46
PCDHGB3-201ENST00000576222 SMIM4Q8WVI0 70 aa12.15□□□□□ -0.46
PCDHGB3-201ENST00000576222 LYSMD1Q96S90 227 aa12.15□□□□□ -0.46
PCDHGB3-201ENST00000576222 CCDC86Q9H6F5 360 aaKnown RBP12.15□□□□□ -0.46
PCDHGB3-201ENST00000576222 SURF4O15260 269 aa12.15□□□□□ -0.47
PCDHGB3-201ENST00000576222 PLA2G10O15496 165 aa12.15□□□□□ -0.47
PCDHGB3-201ENST00000576222 FZD6O60353 706 aa12.15□□□□□ -0.47
PCDHGB3-201ENST00000576222 KCNJ13O60928 360 aa12.15□□□□□ -0.47
PCDHGB3-201ENST00000576222 IFNA5P01569 189 aa12.15□□□□□ -0.47
PCDHGB3-201ENST00000576222 SLC25A35Q3KQZ1 300 aa12.15□□□□□ -0.47
PCDHGB3-201ENST00000576222 YOD1Q5VVQ6 348 aaPredicted RBP12.15□□□□□ -0.47
PCDHGB3-201ENST00000576222 CDH26Q8IXH8 852 aa12.15□□□□□ -0.47
PCDHGB3-201ENST00000576222 OR4C15Q8NGM1 316 aa12.15□□□□□ -0.47
PCDHGB3-201ENST00000576222 PEX11GQ96HA9 241 aa12.15□□□□□ -0.47
PCDHGB3-201ENST00000576222 BARHL1Q9BZE3 327 aa12.15□□□□□ -0.47
PCDHGB3-201ENST00000576222 DZANK1Q9NVP4 752 aa12.15□□□□□ -0.47
PCDHGB3-201ENST00000576222 C2orf42Q9NWW7 574 aa12.15□□□□□ -0.47
PCDHGB3-201ENST00000576222 SCML1Q9UN30 329 aa12.15□□□□□ -0.47
PCDHGB3-201ENST00000576222 PRELID3BQ9Y3B1 194 aa12.15□□□□□ -0.47
PCDHGB3-201ENST00000576222 MEIKINA0A087WXM9 373 aa12.14□□□□□ -0.47
PCDHGB3-201ENST00000576222 CCDC85CA6NKD9 419 aa12.14□□□□□ -0.47
PCDHGB3-201ENST00000576222 FKTNO75072 461 aa12.14□□□□□ -0.47
PCDHGB3-201ENST00000576222 CLRN1P58418 232 aa12.14□□□□□ -0.47
PCDHGB3-201ENST00000576222 SLC7A9P82251 487 aa12.14□□□□□ -0.47
PCDHGB3-201ENST00000576222 TIAL1Q01085 375 aaKnown RBP eCLIP12.14□□□□□ -0.47
PCDHGB3-201ENST00000576222 ALKBH1Q13686 389 aaKnown RBP12.14□□□□□ -0.47
PCDHGB3-201ENST00000576222 ZNF79Q15937 498 aa12.14□□□□□ -0.47
PCDHGB3-201ENST00000576222 OR7E24Q6IFN5 339 aa12.14□□□□□ -0.47
PCDHGB3-201ENST00000576222 ZNF511Q8NB15 262 aa12.14□□□□□ -0.47
PCDHGB3-201ENST00000576222 ST6GALNAC5Q9BVH7 336 aa12.14□□□□□ -0.47
PCDHGB3-201ENST00000576222 PLA2G12AQ9BZM1 189 aa12.14□□□□□ -0.47
PCDHGB3-201ENST00000576222 IFT22Q9H7X7 185 aa12.14□□□□□ -0.47
PCDHGB3-201ENST00000576222 EVA1AQ9H8M9 152 aa12.14□□□□□ -0.47
PCDHGB3-201ENST00000576222 CMC2Q9NRP2 79 aa12.14□□□□□ -0.47
PCDHGB3-201ENST00000576222 TAS2R5Q9NYW4 299 aa12.14□□□□□ -0.47
PCDHGB3-201ENST00000576222 STEAP1Q9UHE8 339 aa12.14□□□□□ -0.47
PCDHGB3-201ENST00000576222 A0A1B0GWA3 101 aa12.14□□□□□ -0.47
PCDHGB3-201ENST00000576222 NME2P22392 152 aa12.14□□□□□ -0.47
PCDHGB3-201ENST00000576222 TAS2R20P59543 309 aa12.14□□□□□ -0.47
PCDHGB3-201ENST00000576222 HSD11B2P80365 405 aa12.14□□□□□ -0.47
PCDHGB3-201ENST00000576222 CDK3Q00526 305 aa12.14□□□□□ -0.47
PCDHGB3-201ENST00000576222 TMEM244Q5VVB8 128 aa12.14□□□□□ -0.47
PCDHGB3-201ENST00000576222 TMEM88Q6PEY1 159 aa12.14□□□□□ -0.47
PCDHGB3-201ENST00000576222 TMEM64Q6YI46 380 aa12.14□□□□□ -0.47
PCDHGB3-201ENST00000576222 C10orf111Q8N326 155 aa12.14□□□□□ -0.47
PCDHGB3-201ENST00000576222 SLC46A2Q9BY10 475 aa12.14□□□□□ -0.47
PCDHGB3-201ENST00000576222 ACKR4Q9NPB9 350 aa12.14□□□□□ -0.47
PCDHGB3-201ENST00000576222 KCMF1Q9P0J7 381 aa12.14□□□□□ -0.47
PCDHGB3-201ENST00000576222 NTNG1Q9Y2I2 539 aa12.14□□□□□ -0.47
PCDHGB3-201ENST00000576222 TSTD3H0UI37 97 aa12.14□□□□□ -0.47
PCDHGB3-201ENST00000576222 OR2F2O95006 317 aa12.14□□□□□ -0.47
PCDHGB3-201ENST00000576222 F13BP05160 661 aa12.14□□□□□ -0.47
PCDHGB3-201ENST00000576222 POU3F4P49335 361 aa12.14□□□□□ -0.47
PCDHGB3-201ENST00000576222 OR2F1Q13607 317 aa12.14□□□□□ -0.47
PCDHGB3-201ENST00000576222 CBFBQ13951 182 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms