RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 H3BML4 177 aa9.49□□□□□ -0.89
LITAF-216ENST00000574848 SCDO00767 359 aa9.49□□□□□ -0.89
LITAF-216ENST00000574848 MSTNO14793 375 aa9.49□□□□□ -0.89
LITAF-216ENST00000574848 MRPS14O60783 128 aaKnown RBP9.49□□□□□ -0.89
LITAF-216ENST00000574848 STX11O75558 287 aa9.49□□□□□ -0.89
LITAF-216ENST00000574848 LGI1O95970 557 aa9.49□□□□□ -0.89
LITAF-216ENST00000574848 ADAP00813 363 aa9.49□□□□□ -0.89
LITAF-216ENST00000574848 DBIP07108 87 aaKnown RBP9.49□□□□□ -0.89
LITAF-216ENST00000574848 THBS1P07996 1170 aa9.49□□□□□ -0.89
LITAF-216ENST00000574848 GUSBP08236 651 aa9.49□□□□□ -0.89
LITAF-216ENST00000574848 CCDC159P0C7I6 412 aa9.49□□□□□ -0.89
LITAF-216ENST00000574848 EPXP11678 715 aa9.49□□□□□ -0.89
LITAF-216ENST00000574848 FCGR2AP12318 317 aa9.49□□□□□ -0.89
LITAF-216ENST00000574848 TNFRSF1BP20333 461 aa9.49□□□□□ -0.89
LITAF-216ENST00000574848 TCEA1P23193 301 aaKnown RBP9.49□□□□□ -0.89
LITAF-216ENST00000574848 EEF1B2P24534 225 aaKnown RBP9.49□□□□□ -0.89
LITAF-216ENST00000574848 ELK4P28324 431 aa9.49□□□□□ -0.89
LITAF-216ENST00000574848 LIMS1P48059 325 aa9.49□□□□□ -0.89
LITAF-216ENST00000574848 AGFG1P52594 562 aaKnown RBP9.49□□□□□ -0.89
LITAF-216ENST00000574848 UGT2B15P54855 530 aa9.49□□□□□ -0.89
LITAF-216ENST00000574848 SUMO3P55854 103 aaPredicted RBP9.49□□□□□ -0.89
LITAF-216ENST00000574848 CXCR4P61073 352 aa9.49□□□□□ -0.89
LITAF-216ENST00000574848 IL5RAQ01344 420 aa9.49□□□□□ -0.89
LITAF-216ENST00000574848 PPP1R8Q12972 351 aaKnown RBP9.49□□□□□ -0.89
LITAF-216ENST00000574848 NPRL3Q12980 569 aa9.49□□□□□ -0.89
LITAF-216ENST00000574848 SNTB1Q13884 538 aaKnown RBP9.49□□□□□ -0.89
LITAF-216ENST00000574848 FGFBP1Q14512 234 aa9.49□□□□□ -0.89
LITAF-216ENST00000574848 MAPK11Q15759 364 aa9.49□□□□□ -0.89
LITAF-216ENST00000574848 CTU2Q2VPK5 515 aaKnown RBP9.49□□□□□ -0.89
LITAF-216ENST00000574848 FGD3Q5JSP0 725 aa9.49□□□□□ -0.89
LITAF-216ENST00000574848 DCST2Q5T1A1 773 aa9.49□□□□□ -0.89
LITAF-216ENST00000574848 CCNJQ5T5M9 372 aa9.49□□□□□ -0.89
LITAF-216ENST00000574848 GALNT5Q7Z7M9 940 aa9.49□□□□□ -0.89
LITAF-216ENST00000574848 UBQLNLQ8IYU4 475 aa9.49□□□□□ -0.89
LITAF-216ENST00000574848 PARP8Q8N3A8 854 aa9.49□□□□□ -0.89
LITAF-216ENST00000574848 TOR1AIP2Q8NFQ8 470 aa9.49□□□□□ -0.89
LITAF-216ENST00000574848 GPR32P1Q8NGA4 272 aa9.49□□□□□ -0.89
LITAF-216ENST00000574848 VANGL1Q8TAA9 524 aaPredicted RBP9.49□□□□□ -0.89
LITAF-216ENST00000574848 ZNF566Q969W8 418 aa9.49□□□□□ -0.89
LITAF-216ENST00000574848 OTUB1Q96FW1 271 aaPredicted RBP9.49□□□□□ -0.89
LITAF-216ENST00000574848 DHRS1Q96LJ7 313 aa9.49□□□□□ -0.89
LITAF-216ENST00000574848 PRRC1Q96M27 445 aa9.49□□□□□ -0.89
LITAF-216ENST00000574848 DACH2Q96NX9 599 aa9.49□□□□□ -0.89
LITAF-216ENST00000574848 FEVQ99581 238 aa9.49□□□□□ -0.89
LITAF-216ENST00000574848 PITX2Q99697 317 aa9.49□□□□□ -0.89
LITAF-216ENST00000574848 FNDC11Q9BVV2 318 aa9.49□□□□□ -0.89
LITAF-216ENST00000574848 GRIP2Q9C0E4 1043 aa9.49□□□□□ -0.89
LITAF-216ENST00000574848 HOXD1Q9GZZ0 328 aa9.49□□□□□ -0.89
LITAF-216ENST00000574848 CXXC4Q9H2H0 198 aa9.49□□□□□ -0.89
LITAF-216ENST00000574848 SLC38A1Q9H2H9 487 aa9.49□□□□□ -0.89
LITAF-216ENST00000574848 CLEC4MQ9H2X3 399 aaPredicted RBP9.49□□□□□ -0.89
LITAF-216ENST00000574848 ANKRD19PQ9H560 264 aa9.49□□□□□ -0.89
LITAF-216ENST00000574848 CCNB1IP1Q9NPC3 277 aa9.49□□□□□ -0.89
LITAF-216ENST00000574848 KRCC1Q9NPI7 259 aaPredicted RBP9.49□□□□□ -0.89
LITAF-216ENST00000574848 ACER3Q9NUN7 267 aa9.49□□□□□ -0.89
LITAF-216ENST00000574848 MED17Q9NVC6 651 aa9.49□□□□□ -0.89
LITAF-216ENST00000574848 PAQR5Q9NXK6 330 aaPredicted RBP9.49□□□□□ -0.89
LITAF-216ENST00000574848 DNAJB12Q9NXW2 375 aaKnown RBP9.49□□□□□ -0.89
LITAF-216ENST00000574848 SCN3BQ9NY72 215 aa9.49□□□□□ -0.89
LITAF-216ENST00000574848 TPRKBQ9Y3C4 175 aa9.49□□□□□ -0.89
LITAF-216ENST00000574848 SNX5Q9Y5X3 404 aa9.49□□□□□ -0.89
LITAF-216ENST00000574848 SPG11Q96JI7 2443 aa9.48□□□□□ -0.89
LITAF-216ENST00000574848 A0A1W2PRQ8 180 aa9.48□□□□□ -0.89
LITAF-216ENST00000574848 TRIM64CA6NLI5 447 aa9.48□□□□□ -0.89
LITAF-216ENST00000574848 ETV2O00321 342 aaPredicted RBP9.48□□□□□ -0.89
LITAF-216ENST00000574848 AP3D1O14617 1153 aa9.48□□□□□ -0.89
LITAF-216ENST00000574848 SEC14L5O43304 696 aa9.48□□□□□ -0.89
LITAF-216ENST00000574848 MPZL2O60487 215 aa9.48□□□□□ -0.89
LITAF-216ENST00000574848 CLIC3O95833 236 aa9.48□□□□□ -0.89
LITAF-216ENST00000574848 CGAP01215 116 aa9.48□□□□□ -0.89
LITAF-216ENST00000574848 LINGO3P0C6S8 592 aa9.48□□□□□ -0.89
LITAF-216ENST00000574848 CD8BP10966 210 aa9.48□□□□□ -0.89
LITAF-216ENST00000574848 NID1P14543 1247 aa9.48□□□□□ -0.89
LITAF-216ENST00000574848 HPGDP15428 266 aa9.48□□□□□ -0.89
LITAF-216ENST00000574848 KIR2DL2P43627 348 aaPredicted RBP9.48□□□□□ -0.89
LITAF-216ENST00000574848 YAP1P46937 504 aaKnown RBP9.48□□□□□ -0.89
LITAF-216ENST00000574848 ZNF41P51814 821 aaPredicted RBP9.48□□□□□ -0.89
LITAF-216ENST00000574848 RPS3AP61247 264 aaKnown RBP9.48□□□□□ -0.89
LITAF-216ENST00000574848 TEKQ02763 1124 aa9.48□□□□□ -0.89
LITAF-216ENST00000574848 ZNF117Q03924 483 aa9.48□□□□□ -0.89
LITAF-216ENST00000574848 FUT5Q11128 374 aa9.48□□□□□ -0.89
LITAF-216ENST00000574848 DGCR6Q14129 220 aa9.48□□□□□ -0.89
LITAF-216ENST00000574848 PON3Q15166 354 aa9.48□□□□□ -0.89
LITAF-216ENST00000574848 KLHL26Q53HC5 615 aa9.48□□□□□ -0.89
LITAF-216ENST00000574848 C6orf141Q5SZD1 244 aa9.48□□□□□ -0.89
LITAF-216ENST00000574848 AP1ARQ63HQ0 302 aa9.48□□□□□ -0.89
LITAF-216ENST00000574848 ZNF773Q6PK81 442 aa9.48□□□□□ -0.89
LITAF-216ENST00000574848 CHMP1BQ7LBR1 199 aa9.48□□□□□ -0.89
LITAF-216ENST00000574848 P4HA3Q7Z4N8 544 aa9.48□□□□□ -0.89
LITAF-216ENST00000574848 TSEN54Q7Z6J9 526 aaKnown RBP9.48□□□□□ -0.89
LITAF-216ENST00000574848 RANBP3LQ86VV4 465 aaPredicted RBP9.48□□□□□ -0.89
LITAF-216ENST00000574848 ZNF619Q8N2I2 560 aa9.48□□□□□ -0.89
LITAF-216ENST00000574848 GATSQ8NAP1 163 aa9.48□□□□□ -0.89
LITAF-216ENST00000574848 ZNF527Q8NB42 609 aa9.48□□□□□ -0.89
LITAF-216ENST00000574848 OR5M1Q8NGP8 315 aa9.48□□□□□ -0.89
LITAF-216ENST00000574848 OR52P1PQ8NH57 321 aa9.48□□□□□ -0.89
LITAF-216ENST00000574848 OR52J3Q8NH60 311 aa9.48□□□□□ -0.89
LITAF-216ENST00000574848 B4GALNT2Q8NHY0 566 aa9.48□□□□□ -0.89
LITAF-216ENST00000574848 FNDC9Q8TBE3 224 aa9.48□□□□□ -0.89
LITAF-216ENST00000574848 POC1BQ8TC44 478 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms