RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 RDH5Q92781 318 aa10.3□□□□□ -0.76
CTNS-208ENST00000574218 COQ8BQ96D53 544 aa10.3□□□□□ -0.76
CTNS-208ENST00000574218 C1orf50Q9BV19 199 aa10.3□□□□□ -0.76
CTNS-208ENST00000574218 ZNF416Q9BWM5 594 aa10.3□□□□□ -0.76
CTNS-208ENST00000574218 OR51I1Q9H343 314 aa10.3□□□□□ -0.76
CTNS-208ENST00000574218 TUBB1Q9H4B7 451 aa10.3□□□□□ -0.76
CTNS-208ENST00000574218 SEC61A2Q9H9S3 476 aa10.3□□□□□ -0.76
CTNS-208ENST00000574218 CRLF2Q9HC73 371 aa10.3□□□□□ -0.76
CTNS-208ENST00000574218 OXSMQ9NWU1 459 aa10.3□□□□□ -0.76
CTNS-208ENST00000574218 ADPRHL2Q9NX46 363 aa10.3□□□□□ -0.76
CTNS-208ENST00000574218 OSGIN1Q9UJX0 560 aa10.3□□□□□ -0.76
CTNS-208ENST00000574218 IGHV2OR16-5A0A0B4J2B6 119 aa10.29□□□□□ -0.76
CTNS-208ENST00000574218 A0A0G2JMP0 313 aa10.29□□□□□ -0.76
CTNS-208ENST00000574218 A0A0X1KG70 313 aa10.29□□□□□ -0.76
CTNS-208ENST00000574218 TMEM129A0AVI4 362 aa10.29□□□□□ -0.76
CTNS-208ENST00000574218 PLIN3O60664 434 aa10.29□□□□□ -0.76
CTNS-208ENST00000574218 CELA3BP08861 270 aa10.29□□□□□ -0.76
CTNS-208ENST00000574218 OR12D1P0DN82 309 aa10.29□□□□□ -0.76
CTNS-208ENST00000574218 FPR2P25090 351 aa10.29□□□□□ -0.76
CTNS-208ENST00000574218 GTF2E2P29084 291 aaKnown RBP10.29□□□□□ -0.76
CTNS-208ENST00000574218 SELENOPP49908 381 aa10.29□□□□□ -0.76
CTNS-208ENST00000574218 TMEM33P57088 247 aa10.29□□□□□ -0.76
CTNS-208ENST00000574218 ROR2Q01974 943 aaKnown RBP10.29□□□□□ -0.76
CTNS-208ENST00000574218 POU3F1Q03052 451 aaPredicted RBP10.29□□□□□ -0.76
CTNS-208ENST00000574218 PDCD2Q16342 344 aaPredicted RBP10.29□□□□□ -0.76
CTNS-208ENST00000574218 MIDNQ504T8 468 aa10.29□□□□□ -0.76
CTNS-208ENST00000574218 PRAMEF8Q5VWM4 474 aa10.29□□□□□ -0.76
CTNS-208ENST00000574218 PRAMEF7Q5VXH5 474 aa10.29□□□□□ -0.76
CTNS-208ENST00000574218 TREML4Q6UXN2 200 aa10.29□□□□□ -0.76
CTNS-208ENST00000574218 C1QL2Q7Z5L3 287 aa10.29□□□□□ -0.76
CTNS-208ENST00000574218 ZIC4Q8N9L1 334 aa10.29□□□□□ -0.76
CTNS-208ENST00000574218 FNDC5Q8NAU1 212 aa10.29□□□□□ -0.76
CTNS-208ENST00000574218 OR4M2Q8NGB6 313 aa10.29□□□□□ -0.76
CTNS-208ENST00000574218 OR4A15Q8NGL6 344 aa10.29□□□□□ -0.76
CTNS-208ENST00000574218 NANPQ8TBE9 248 aa10.29□□□□□ -0.76
CTNS-208ENST00000574218 ROPN1LQ96C74 230 aa10.29□□□□□ -0.76
CTNS-208ENST00000574218 RAB39BQ96DA2 213 aa10.29□□□□□ -0.76
CTNS-208ENST00000574218 SLC6A7Q99884 636 aa10.29□□□□□ -0.76
CTNS-208ENST00000574218 NTN4Q9HB63 628 aa10.29□□□□□ -0.76
CTNS-208ENST00000574218 DNAJC15Q9Y5T4 150 aa10.29□□□□□ -0.76
CTNS-208ENST00000574218 ZC3H12DA2A288 527 aaKnown RBP10.28□□□□□ -0.76
CTNS-208ENST00000574218 LIPT2A6NK58 231 aa10.28□□□□□ -0.76
CTNS-208ENST00000574218 AP3D1O14617 1153 aa10.28□□□□□ -0.76
CTNS-208ENST00000574218 BCAS1O75363 584 aaPredicted RBP10.28□□□□□ -0.76
CTNS-208ENST00000574218 CHRM4P08173 479 aa10.28□□□□□ -0.76
CTNS-208ENST00000574218 GUSBP08236 651 aa10.28□□□□□ -0.76
CTNS-208ENST00000574218 TCN1P20061 433 aaPredicted RBP10.28□□□□□ -0.76
CTNS-208ENST00000574218 EVX1P49640 407 aa10.28□□□□□ -0.76
CTNS-208ENST00000574218 RPS23P62266 143 aaKnown RBP10.28□□□□□ -0.76
CTNS-208ENST00000574218 ETF1P62495 437 aaKnown RBP10.28□□□□□ -0.76
CTNS-208ENST00000574218 GALK2Q01415 458 aa10.28□□□□□ -0.76
CTNS-208ENST00000574218 TRMT5Q32P41 509 aaKnown RBP10.28□□□□□ -0.76
CTNS-208ENST00000574218 ELFN2Q5R3F8 820 aa10.28□□□□□ -0.76
CTNS-208ENST00000574218 GKAP1Q5VSY0 366 aaPredicted RBP10.28□□□□□ -0.76
CTNS-208ENST00000574218 IL23RQ5VWK5 629 aa10.28□□□□□ -0.76
CTNS-208ENST00000574218 ACSM5Q6NUN0 579 aa10.28□□□□□ -0.76
CTNS-208ENST00000574218 TNFAIP8L2Q6P589 184 aaPredicted RBP10.28□□□□□ -0.76
CTNS-208ENST00000574218 SYT10Q6XYQ8 523 aa10.28□□□□□ -0.76
CTNS-208ENST00000574218 FRRS1Q6ZNA5 592 aa10.28□□□□□ -0.76
CTNS-208ENST00000574218 CREB3L2Q70SY1 520 aa10.28□□□□□ -0.76
CTNS-208ENST00000574218 TRMT10CQ7L0Y3 403 aaKnown RBP10.28□□□□□ -0.76
CTNS-208ENST00000574218 HMGN2P46Q86SG4 172 aa10.28□□□□□ -0.76
CTNS-208ENST00000574218 TREML1Q86YW5 311 aa10.28□□□□□ -0.76
CTNS-208ENST00000574218 CMIPQ8IY22 773 aa10.28□□□□□ -0.76
CTNS-208ENST00000574218 CCDC36Q8IYA8 594 aa10.28□□□□□ -0.76
CTNS-208ENST00000574218 CLEC4FQ8N1N0 589 aa10.28□□□□□ -0.76
CTNS-208ENST00000574218 GPR137CQ8N3F9 429 aa10.28□□□□□ -0.76
CTNS-208ENST00000574218 KRTCAP2Q8N6L1 136 aa10.28□□□□□ -0.76
CTNS-208ENST00000574218 LRRC17Q8N6Y2 441 aa10.28□□□□□ -0.76
CTNS-208ENST00000574218 MGARPQ8TDB4 240 aa10.28□□□□□ -0.76
CTNS-208ENST00000574218 CNOT9Q92600 299 aaKnown RBP10.28□□□□□ -0.76
CTNS-208ENST00000574218 LINC00470Q9BZP3 86 aa10.28□□□□□ -0.76
CTNS-208ENST00000574218 DPY30Q9C005 99 aa10.28□□□□□ -0.76
CTNS-208ENST00000574218 NOX3Q9HBY0 568 aa10.28□□□□□ -0.76
CTNS-208ENST00000574218 ZNF275Q9NSD4 429 aaPredicted RBP10.28□□□□□ -0.76
CTNS-208ENST00000574218 GIMAP2Q9UG22 337 aa10.28□□□□□ -0.76
CTNS-208ENST00000574218 ZNF346Q9UL40 294 aaKnown RBP10.28□□□□□ -0.76
CTNS-208ENST00000574218 PYCARDQ9ULZ3 195 aa10.28□□□□□ -0.76
CTNS-208ENST00000574218 RASD1Q9Y272 281 aa10.28□□□□□ -0.76
CTNS-208ENST00000574218 A0A1W2PPW3 197 aa10.27□□□□□ -0.77
CTNS-208ENST00000574218 CFAP73A6NFT4 308 aa10.27□□□□□ -0.77
CTNS-208ENST00000574218 J3QLI3 93 aa10.27□□□□□ -0.77
CTNS-208ENST00000574218 COPEO14579 308 aa10.27□□□□□ -0.77
CTNS-208ENST00000574218 SLC43A1O75387 559 aa10.27□□□□□ -0.77
CTNS-208ENST00000574218 UPK3AO75631 287 aa10.27□□□□□ -0.77
CTNS-208ENST00000574218 MPZL1O95297 269 aa10.27□□□□□ -0.77
CTNS-208ENST00000574218 HPXP02790 462 aa10.27□□□□□ -0.77
CTNS-208ENST00000574218 HKR1P10072 659 aa10.27□□□□□ -0.77
CTNS-208ENST00000574218 COL8A2P25067 703 aa10.27□□□□□ -0.77
CTNS-208ENST00000574218 LSP1P33241 339 aa10.27□□□□□ -0.77
CTNS-208ENST00000574218 CHI3L1P36222 383 aaPredicted RBP10.27□□□□□ -0.77
CTNS-208ENST00000574218 ANXA11P50995 505 aaKnown RBP10.27□□□□□ -0.77
CTNS-208ENST00000574218 COPZ1P61923 177 aa10.27□□□□□ -0.77
CTNS-208ENST00000574218 UBA52P62987 128 aaKnown RBP10.27□□□□□ -0.77
CTNS-208ENST00000574218 ARF1P84077 181 aaKnown RBP10.27□□□□□ -0.77
CTNS-208ENST00000574218 MAD2L1Q13257 205 aaPredicted RBP10.27□□□□□ -0.77
CTNS-208ENST00000574218 GSTA3Q16772 222 aa10.27□□□□□ -0.77
CTNS-208ENST00000574218 DCAF12L2Q5VW00 463 aa10.27□□□□□ -0.77
CTNS-208ENST00000574218 MDP1Q86V88 176 aa10.27□□□□□ -0.77
CTNS-208ENST00000574218 MYPOPQ86VE0 399 aaPredicted RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms