RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 M0R233 179 aa17.46■□□□□ 0.39
SCARF1-206ENST00000573852 GPRIN2O60269 458 aa17.46■□□□□ 0.39
SCARF1-206ENST00000573852 PRAF2O60831 178 aa17.46■□□□□ 0.39
SCARF1-206ENST00000573852 RRASP10301 218 aa17.46■□□□□ 0.39
SCARF1-206ENST00000573852 NDUFAF6Q330K2 333 aa17.46■□□□□ 0.39
SCARF1-206ENST00000573852 SLC25A25Q6KCM7 469 aa17.46■□□□□ 0.39
SCARF1-206ENST00000573852 RERGQ96A58 199 aaPredicted RBP17.46■□□□□ 0.39
SCARF1-206ENST00000573852 SGTBQ96EQ0 304 aa17.46■□□□□ 0.39
SCARF1-206ENST00000573852 LRFN5Q96NI6 719 aa17.46■□□□□ 0.39
SCARF1-206ENST00000573852 STARD5Q9NSY2 213 aa17.46■□□□□ 0.39
SCARF1-206ENST00000573852 COQ3Q9NZJ6 369 aa17.46■□□□□ 0.39
SCARF1-206ENST00000573852 KIAA0100Q14667 2235 aaKnown RBP17.46■□□□□ 0.39
SCARF1-206ENST00000573852 A0A1B0GUH1 482 aa17.46■□□□□ 0.39
SCARF1-206ENST00000573852 FAM171A2A8MVW0 826 aa17.46■□□□□ 0.39
SCARF1-206ENST00000573852 KHDRBS3O75525 346 aaKnown RBP17.46■□□□□ 0.39
SCARF1-206ENST00000573852 OR7A10O76100 309 aa17.46■□□□□ 0.39
SCARF1-206ENST00000573852 ZFPL1O95159 310 aa17.46■□□□□ 0.39
SCARF1-206ENST00000573852 ECDO95905 644 aaPredicted RBP17.46■□□□□ 0.39
SCARF1-206ENST00000573852 LGALS3BPQ08380 585 aa17.46■□□□□ 0.39
SCARF1-206ENST00000573852 GPR18Q14330 331 aa17.46■□□□□ 0.39
SCARF1-206ENST00000573852 MFSD13AQ14CX5 517 aa17.46■□□□□ 0.39
SCARF1-206ENST00000573852 ELFN2Q5R3F8 820 aa17.46■□□□□ 0.39
SCARF1-206ENST00000573852 METTL11BQ5VVY1 283 aa17.46■□□□□ 0.39
SCARF1-206ENST00000573852 ULK3Q6PHR2 472 aa17.46■□□□□ 0.39
SCARF1-206ENST00000573852 TMEM65Q6PI78 240 aa17.46■□□□□ 0.39
SCARF1-206ENST00000573852 NUDT18Q6ZVK8 323 aa17.46■□□□□ 0.39
SCARF1-206ENST00000573852 KANSL1Q7Z3B3 1105 aa17.46■□□□□ 0.39
SCARF1-206ENST00000573852 CDH24Q86UP0 819 aa17.46■□□□□ 0.39
SCARF1-206ENST00000573852 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.46■□□□□ 0.39
SCARF1-206ENST00000573852 SPERTQ8NA61 448 aa17.46■□□□□ 0.39
SCARF1-206ENST00000573852 FAM71CQ8NEG0 241 aa17.46■□□□□ 0.39
SCARF1-206ENST00000573852 RASD2Q96D21 266 aa17.46■□□□□ 0.39
SCARF1-206ENST00000573852 TWSG1Q9GZX9 223 aa17.46■□□□□ 0.39
SCARF1-206ENST00000573852 CA10Q9NS85 328 aa17.46■□□□□ 0.39
SCARF1-206ENST00000573852 OBP2AQ9NY56 170 aa17.46■□□□□ 0.39
SCARF1-206ENST00000573852 PIPOXQ9P0Z9 390 aa17.46■□□□□ 0.39
SCARF1-206ENST00000573852 PRELID1Q9Y255 219 aa17.46■□□□□ 0.39
SCARF1-206ENST00000573852 ZNF281Q9Y2X9 895 aa17.46■□□□□ 0.39
SCARF1-206ENST00000573852 MAB21L2Q9Y586 359 aa17.46■□□□□ 0.39
SCARF1-206ENST00000573852 A0A1B0GVT2 93 aa17.45■□□□□ 0.38
SCARF1-206ENST00000573852 SRSF5Q13243 272 aaKnown RBP17.45■□□□□ 0.38
SCARF1-206ENST00000573852 RPS4Y2Q8TD47 263 aa17.45■□□□□ 0.38
SCARF1-206ENST00000573852 FCAMRQ8WWV6 532 aa17.45■□□□□ 0.38
SCARF1-206ENST00000573852 PHYHIPQ92561 330 aa17.45■□□□□ 0.38
SCARF1-206ENST00000573852 HOXB13Q92826 284 aaPredicted RBP17.45■□□□□ 0.38
SCARF1-206ENST00000573852 LCORQ96JN0 433 aaPredicted RBP17.45■□□□□ 0.38
SCARF1-206ENST00000573852 NOX3Q9HBY0 568 aa17.45■□□□□ 0.38
SCARF1-206ENST00000573852 AKAP7Q9P0M2 348 aaPredicted RBP17.45■□□□□ 0.38
SCARF1-206ENST00000573852 PCOLCE2Q9UKZ9 415 aa17.45■□□□□ 0.38
SCARF1-206ENST00000573852 FOXJ3Q9UPW0 622 aa17.45■□□□□ 0.38
SCARF1-206ENST00000573852 TRANK1O15050 2925 aa17.45■□□□□ 0.38
SCARF1-206ENST00000573852 C4orf47A7E2U8 309 aa17.45■□□□□ 0.38
SCARF1-206ENST00000573852 PDCD5O14737 125 aa17.45■□□□□ 0.38
SCARF1-206ENST00000573852 GALR3O60755 368 aaPredicted RBP17.45■□□□□ 0.38
SCARF1-206ENST00000573852 ALDOBP05062 364 aa17.45■□□□□ 0.38
SCARF1-206ENST00000573852 S1PR1P21453 382 aa17.45■□□□□ 0.38
SCARF1-206ENST00000573852 ZNF267Q14586 743 aaPredicted RBP17.45■□□□□ 0.38
SCARF1-206ENST00000573852 TMEM240Q5SV17 173 aa17.45■□□□□ 0.38
SCARF1-206ENST00000573852 PWWP2BQ6NUJ5 590 aa17.45■□□□□ 0.38
SCARF1-206ENST00000573852 UXS1Q8NBZ7 420 aa17.45■□□□□ 0.38
SCARF1-206ENST00000573852 SYNPRQ8TBG9 265 aa17.45■□□□□ 0.38
SCARF1-206ENST00000573852 WDR89Q96FK6 387 aaPredicted RBP17.45■□□□□ 0.38
SCARF1-206ENST00000573852 GSX2Q9BZM3 304 aa17.45■□□□□ 0.38
SCARF1-206ENST00000573852 NMNAT2Q9BZQ4 307 aa17.45■□□□□ 0.38
SCARF1-206ENST00000573852 TSPAN10Q9H1Z9 355 aaPredicted RBP17.45■□□□□ 0.38
SCARF1-206ENST00000573852 FKRPQ9H9S5 495 aa17.45■□□□□ 0.38
SCARF1-206ENST00000573852 MKKSQ9NPJ1 570 aaPredicted RBP17.45■□□□□ 0.38
SCARF1-206ENST00000573852 ZNF224Q9NZL3 707 aa17.45■□□□□ 0.38
SCARF1-206ENST00000573852 MGAT4CQ9UBM8 478 aa17.45■□□□□ 0.38
SCARF1-206ENST00000573852 OR5V1Q9UGF6 321 aa17.45■□□□□ 0.38
SCARF1-206ENST00000573852 POMT2Q9UKY4 750 aa17.45■□□□□ 0.38
SCARF1-206ENST00000573852 ZNF346Q9UL40 294 aaKnown RBP17.45■□□□□ 0.38
SCARF1-206ENST00000573852 V9GY05 133 aa17.45■□□□□ 0.38
SCARF1-206ENST00000573852 HEATR5AQ86XA9 2040 aa17.45■□□□□ 0.38
SCARF1-206ENST00000573852 EPHA4P54764 986 aa17.44■□□□□ 0.38
SCARF1-206ENST00000573852 ERVK-25P63136 954 aa17.44■□□□□ 0.38
SCARF1-206ENST00000573852 GDE1Q9NZC3 331 aa17.44■□□□□ 0.38
SCARF1-206ENST00000573852 RABL2AQ9UBK7 228 aaPredicted RBP17.44■□□□□ 0.38
SCARF1-206ENST00000573852 RABL2BQ9UNT1 228 aa17.44■□□□□ 0.38
SCARF1-206ENST00000573852 SPTBP11277 2137 aa17.44■□□□□ 0.38
SCARF1-206ENST00000573852 ANKRD20A5PA0PJZ0 165 aa17.44■□□□□ 0.38
SCARF1-206ENST00000573852 A6NCN8 305 aa17.44■□□□□ 0.38
SCARF1-206ENST00000573852 NAP1L6A6NFF2 107 aa17.44■□□□□ 0.38
SCARF1-206ENST00000573852 GRXCR1A8MXD5 290 aa17.44■□□□□ 0.38
SCARF1-206ENST00000573852 C5orf67F2Z3F1 127 aa17.44■□□□□ 0.38
SCARF1-206ENST00000573852 HRKO00198 91 aa17.44■□□□□ 0.38
SCARF1-206ENST00000573852 ANXA7P20073 488 aaKnown RBP17.44■□□□□ 0.38
SCARF1-206ENST00000573852 KIR2DL1P43626 348 aaPredicted RBP17.44■□□□□ 0.38
SCARF1-206ENST00000573852 P2RX1P51575 399 aa17.44■□□□□ 0.38
SCARF1-206ENST00000573852 AP3S2P59780 193 aa17.44■□□□□ 0.38
SCARF1-206ENST00000573852 RAB14P61106 215 aa17.44■□□□□ 0.38
SCARF1-206ENST00000573852 OPCMLQ14982 345 aa17.44■□□□□ 0.38
SCARF1-206ENST00000573852 LINC00303Q3SY05 128 aa17.44■□□□□ 0.38
SCARF1-206ENST00000573852 GLDNQ6ZMI3 551 aaPredicted RBP17.44■□□□□ 0.38
SCARF1-206ENST00000573852 DPY19L2P2Q6ZN68 376 aa17.44■□□□□ 0.38
SCARF1-206ENST00000573852 BADQ92934 168 aa17.44■□□□□ 0.38
SCARF1-206ENST00000573852 FAM131CQ96AQ9 280 aa17.44■□□□□ 0.38
SCARF1-206ENST00000573852 DTX4Q9Y2E6 619 aa17.44■□□□□ 0.38
SCARF1-206ENST00000573852 PCDHGA5Q9Y5G8 931 aa17.44■□□□□ 0.38
SCARF1-206ENST00000573852 XIRP2A4UGR9 3374 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms