RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 COMTD1Q86VU5 262 aa6.91□□□□□ -1.3
SMG6-211ENST00000572369 LSRQ86X29 649 aaPredicted RBP6.91□□□□□ -1.3
SMG6-211ENST00000572369 CARM1Q86X55 608 aa6.91□□□□□ -1.3
SMG6-211ENST00000572369 P3H2Q8IVL5 708 aa6.91□□□□□ -1.3
SMG6-211ENST00000572369 TMEM99Q8N816 258 aa6.91□□□□□ -1.3
SMG6-211ENST00000572369 GPR32P1Q8NGA4 272 aa6.91□□□□□ -1.3
SMG6-211ENST00000572369 OR6T1Q8NGN1 323 aa6.91□□□□□ -1.3
SMG6-211ENST00000572369 MFSD8Q8NHS3 518 aa6.91□□□□□ -1.3
SMG6-211ENST00000572369 ADAMTS16Q8TE57 1224 aa6.91□□□□□ -1.3
SMG6-211ENST00000572369 SMR3AQ99954 134 aa6.91□□□□□ -1.3
SMG6-211ENST00000572369 GPATCH1Q9BRR8 931 aaKnown RBP6.91□□□□□ -1.3
SMG6-211ENST00000572369 POLDIP3Q9BY77 421 aaKnown RBP6.91□□□□□ -1.3
SMG6-211ENST00000572369 BCO1Q9HAY6 547 aa6.91□□□□□ -1.3
SMG6-211ENST00000572369 C12orf10Q9HB07 376 aa6.91□□□□□ -1.3
SMG6-211ENST00000572369 MCCC2Q9HCC0 563 aa6.91□□□□□ -1.3
SMG6-211ENST00000572369 SPAG4Q9NPE6 437 aa6.91□□□□□ -1.3
SMG6-211ENST00000572369 PARPBPQ9NWS1 579 aa6.91□□□□□ -1.3
SMG6-211ENST00000572369 NDE1Q9NXR1 346 aa6.91□□□□□ -1.3
SMG6-211ENST00000572369 ZNF226Q9NYT6 803 aa6.91□□□□□ -1.3
SMG6-211ENST00000572369 UPB1Q9UBR1 384 aa6.91□□□□□ -1.3
SMG6-211ENST00000572369 TRAV36DV7A0A075B6V5 113 aa6.9□□□□□ -1.3
SMG6-211ENST00000572369 A0A087WUJ7 227 aa6.9□□□□□ -1.3
SMG6-211ENST00000572369 A0A0B4J2E0 115 aa6.9□□□□□ -1.3
SMG6-211ENST00000572369 A0A1B0GX12 115 aa6.9□□□□□ -1.3
SMG6-211ENST00000572369 TRAPPC13A5PLN9 417 aa6.9□□□□□ -1.3
SMG6-211ENST00000572369 AQP7P3A6NL99 342 aa6.9□□□□□ -1.3
SMG6-211ENST00000572369 A6NNC1 897 aa6.9□□□□□ -1.3
SMG6-211ENST00000572369 ZNF716A6NP11 495 aa6.9□□□□□ -1.3
SMG6-211ENST00000572369 TMEM229AB2RXF0 380 aa6.9□□□□□ -1.3
SMG6-211ENST00000572369 CHP2O43745 196 aa6.9□□□□□ -1.3
SMG6-211ENST00000572369 TPST2O60704 377 aa6.9□□□□□ -1.3
SMG6-211ENST00000572369 FMO6PO60774 539 aa6.9□□□□□ -1.3
SMG6-211ENST00000572369 SHOX2O60902 331 aaPredicted RBP6.9□□□□□ -1.3
SMG6-211ENST00000572369 ADAP00813 363 aa6.9□□□□□ -1.3
SMG6-211ENST00000572369 IGHV3-9P01782 118 aa6.9□□□□□ -1.3
SMG6-211ENST00000572369 UMPSP11172 480 aa6.9□□□□□ -1.3
SMG6-211ENST00000572369 NCK1P16333 377 aa6.9□□□□□ -1.3
SMG6-211ENST00000572369 TCN1P20061 433 aaPredicted RBP6.9□□□□□ -1.3
SMG6-211ENST00000572369 TNFRSF1BP20333 461 aa6.9□□□□□ -1.3
SMG6-211ENST00000572369 OR1E2P47887 323 aa6.9□□□□□ -1.3
SMG6-211ENST00000572369 OR3A2P47893 321 aa6.9□□□□□ -1.3
SMG6-211ENST00000572369 GSK3BP49841 420 aa6.9□□□□□ -1.3
SMG6-211ENST00000572369 CDH12P55289 794 aa6.9□□□□□ -1.3
SMG6-211ENST00000572369 SELENOWP63302 87 aa6.9□□□□□ -1.3
SMG6-211ENST00000572369 C1DQ13901 141 aaKnown RBP6.9□□□□□ -1.3
SMG6-211ENST00000572369 MFSD13AQ14CX5 517 aa6.9□□□□□ -1.3
SMG6-211ENST00000572369 PDK3Q15120 406 aa6.9□□□□□ -1.3
SMG6-211ENST00000572369 SWT1Q5T5J6 900 aaKnown RBP6.9□□□□□ -1.3
SMG6-211ENST00000572369 FAM69AQ5T7M9 428 aa6.9□□□□□ -1.3
SMG6-211ENST00000572369 TFAP2EQ6VUC0 442 aa6.9□□□□□ -1.3
SMG6-211ENST00000572369 CXorf67Q86X51 503 aaPredicted RBP6.9□□□□□ -1.3
SMG6-211ENST00000572369 RBM45Q8IUH3 476 aaKnown RBP6.9□□□□□ -1.3
SMG6-211ENST00000572369 RNF148Q8N7C7 305 aa6.9□□□□□ -1.3
SMG6-211ENST00000572369 ACBD4Q8NC06 268 aa6.9□□□□□ -1.3
SMG6-211ENST00000572369 STEAP2Q8NFT2 490 aa6.9□□□□□ -1.3
SMG6-211ENST00000572369 TAAR8Q969N4 342 aa6.9□□□□□ -1.3
SMG6-211ENST00000572369 APH1AQ96BI3 265 aa6.9□□□□□ -1.3
SMG6-211ENST00000572369 KTI12Q96EK9 354 aaPredicted RBP6.9□□□□□ -1.3
SMG6-211ENST00000572369 NSL1Q96IY1 281 aa6.9□□□□□ -1.3
SMG6-211ENST00000572369 DACH2Q96NX9 599 aa6.9□□□□□ -1.3
SMG6-211ENST00000572369 WFIKKN1Q96NZ8 548 aa6.9□□□□□ -1.3
SMG6-211ENST00000572369 FOXC2Q99958 501 aa6.9□□□□□ -1.3
SMG6-211ENST00000572369 WFDC6Q9BQY6 131 aa6.9□□□□□ -1.3
SMG6-211ENST00000572369 ASPNQ9BXN1 380 aa6.9□□□□□ -1.3
SMG6-211ENST00000572369 HDHD5Q9BXW7 423 aa6.9□□□□□ -1.3
SMG6-211ENST00000572369 RSPO3Q9BXY4 272 aaPredicted RBP6.9□□□□□ -1.3
SMG6-211ENST00000572369 ARL8BQ9NVJ2 186 aa6.9□□□□□ -1.3
SMG6-211ENST00000572369 GMPR2Q9P2T1 348 aaKnown RBP6.9□□□□□ -1.3
SMG6-211ENST00000572369 EGFL7Q9UHF1 273 aa6.9□□□□□ -1.3
SMG6-211ENST00000572369 PRSS50Q9UI38 385 aa6.9□□□□□ -1.3
SMG6-211ENST00000572369 RPS6KA6Q9UK32 745 aa6.9□□□□□ -1.3
SMG6-211ENST00000572369 SLC7A7Q9UM01 511 aa6.9□□□□□ -1.3
SMG6-211ENST00000572369 IGKV3D-15A0A087WSY6 115 aa6.89□□□□□ -1.31
SMG6-211ENST00000572369 CIB4A0PJX0 185 aa6.89□□□□□ -1.31
SMG6-211ENST00000572369 ZNF814B7Z6K7 855 aa6.89□□□□□ -1.31
SMG6-211ENST00000572369 HAX1O00165 279 aa6.89□□□□□ -1.31
SMG6-211ENST00000572369 KPNA4O00629 521 aaPredicted RBP6.89□□□□□ -1.31
SMG6-211ENST00000572369 RAMP1O60894 148 aa6.89□□□□□ -1.31
SMG6-211ENST00000572369 LYZL6O75951 148 aa6.89□□□□□ -1.31
SMG6-211ENST00000572369 VAMP5O95183 116 aa6.89□□□□□ -1.31
SMG6-211ENST00000572369 OR6A2O95222 327 aa6.89□□□□□ -1.31
SMG6-211ENST00000572369 SERPINA1P01009 418 aa6.89□□□□□ -1.31
SMG6-211ENST00000572369 HIST1H2ABP04908 130 aa6.89□□□□□ -1.31
SMG6-211ENST00000572369 PPP3CBP16298 524 aa6.89□□□□□ -1.31
SMG6-211ENST00000572369 ZNF43P17038 809 aa6.89□□□□□ -1.31
SMG6-211ENST00000572369 AHCYP23526 432 aa6.89□□□□□ -1.31
SMG6-211ENST00000572369 GRPRP30550 384 aa6.89□□□□□ -1.31
SMG6-211ENST00000572369 H3F3AP84243 136 aa6.89□□□□□ -1.31
SMG6-211ENST00000572369 SLC25A3Q00325 362 aa6.89□□□□□ -1.31
SMG6-211ENST00000572369 EGR4Q05215 589 aa6.89□□□□□ -1.31
SMG6-211ENST00000572369 FAPQ12884 760 aa6.89□□□□□ -1.31
SMG6-211ENST00000572369 ITGADQ13349 1161 aa6.89□□□□□ -1.31
SMG6-211ENST00000572369 PMS2P3Q13401 168 aa6.89□□□□□ -1.31
SMG6-211ENST00000572369 SLC17A1Q14916 467 aa6.89□□□□□ -1.31
SMG6-211ENST00000572369 P2RY6Q15077 328 aa6.89□□□□□ -1.31
SMG6-211ENST00000572369 POU4F3Q15319 338 aa6.89□□□□□ -1.31
SMG6-211ENST00000572369 TSC22D1Q15714 1073 aa6.89□□□□□ -1.31
SMG6-211ENST00000572369 NPTX1Q15818 432 aa6.89□□□□□ -1.31
SMG6-211ENST00000572369 STK11Q15831 433 aa6.89□□□□□ -1.31
SMG6-211ENST00000572369 SAMD4BQ5PRF9 694 aaKnown RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms