RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 ZDHHC13Q8IUH4 622 aa12.32□□□□□ -0.44
RPAIN-209ENST00000571558 FAM83FQ8NEG4 500 aaPredicted RBP12.32□□□□□ -0.44
RPAIN-209ENST00000571558 WFDC11Q8NEX6 87 aa12.32□□□□□ -0.44
RPAIN-209ENST00000571558 OR4K5Q8NGD3 323 aa12.32□□□□□ -0.44
RPAIN-209ENST00000571558 TMEM239Q8WW34 195 aa12.32□□□□□ -0.44
RPAIN-209ENST00000571558 HS6ST2Q96MM7 605 aa12.32□□□□□ -0.44
RPAIN-209ENST00000571558 SLC29A1Q99808 456 aa12.32□□□□□ -0.44
RPAIN-209ENST00000571558 TMEM43Q9BTV4 400 aa12.32□□□□□ -0.44
RPAIN-209ENST00000571558 MEPEQ9NQ76 525 aaPredicted RBP12.32□□□□□ -0.44
RPAIN-209ENST00000571558 QPCTLQ9NXS2 382 aa12.32□□□□□ -0.44
RPAIN-209ENST00000571558 CRIM1Q9NZV1 1036 aa12.32□□□□□ -0.44
RPAIN-209ENST00000571558 PDP1Q9P0J1 537 aaPredicted RBP12.32□□□□□ -0.44
RPAIN-209ENST00000571558 FOXD3Q9UJU5 478 aaPredicted RBP12.32□□□□□ -0.44
RPAIN-209ENST00000571558 DKKL1Q9UK85 242 aa12.32□□□□□ -0.44
RPAIN-209ENST00000571558 TMCC3Q9ULS5 477 aa12.32□□□□□ -0.44
RPAIN-209ENST00000571558 TMED7Q9Y3B3 224 aa12.32□□□□□ -0.44
RPAIN-209ENST00000571558 FAM215AQ9Y5M1 114 aa12.32□□□□□ -0.44
RPAIN-209ENST00000571558 STAB1Q9NY15 2570 aa12.31□□□□□ -0.44
RPAIN-209ENST00000571558 ELOA3DA6NLF2 546 aaPredicted RBP12.31□□□□□ -0.44
RPAIN-209ENST00000571558 FAM166BA8MTA8 275 aa12.31□□□□□ -0.44
RPAIN-209ENST00000571558 SOCS2O14508 198 aa12.31□□□□□ -0.44
RPAIN-209ENST00000571558 AQP7O14520 342 aa12.31□□□□□ -0.44
RPAIN-209ENST00000571558 KLF4O43474 513 aa12.31□□□□□ -0.44
RPAIN-209ENST00000571558 CCNB2O95067 398 aa12.31□□□□□ -0.44
RPAIN-209ENST00000571558 ATE1O95260 518 aa12.31□□□□□ -0.44
RPAIN-209ENST00000571558 CELA3AP09093 270 aa12.31□□□□□ -0.44
RPAIN-209ENST00000571558 IL11P20809 199 aa12.31□□□□□ -0.44
RPAIN-209ENST00000571558 CBLP22681 906 aa12.31□□□□□ -0.44
RPAIN-209ENST00000571558 GDF1P27539 372 aa12.31□□□□□ -0.44
RPAIN-209ENST00000571558 MAGEA5P43359 124 aa12.31□□□□□ -0.44
RPAIN-209ENST00000571558 PTDSS1P48651 473 aaKnown RBP12.31□□□□□ -0.44
RPAIN-209ENST00000571558 MAP2K6P52564 334 aa12.31□□□□□ -0.44
RPAIN-209ENST00000571558 CTBP2P56545 445 aa12.31□□□□□ -0.44
RPAIN-209ENST00000571558 PPP2R2BQ00005 443 aa12.31□□□□□ -0.44
RPAIN-209ENST00000571558 PLGLB1Q02325 96 aa12.31□□□□□ -0.44
RPAIN-209ENST00000571558 ELOA3BQ3SY89 546 aa12.31□□□□□ -0.44
RPAIN-209ENST00000571558 RIPPLY2Q5TAB7 128 aa12.31□□□□□ -0.44
RPAIN-209ENST00000571558 SHEQ5VZ18 495 aa12.31□□□□□ -0.44
RPAIN-209ENST00000571558 ANKRD34AQ69YU3 496 aa12.31□□□□□ -0.44
RPAIN-209ENST00000571558 ZNF585AQ6P3V2 769 aa12.31□□□□□ -0.44
RPAIN-209ENST00000571558 PGBD2Q6P3X8 592 aa12.31□□□□□ -0.44
RPAIN-209ENST00000571558 STK32CQ86UX6 486 aa12.31□□□□□ -0.44
RPAIN-209ENST00000571558 RNF113BQ8IZP6 322 aaKnown RBP12.31□□□□□ -0.44
RPAIN-209ENST00000571558 CBR4Q8N4T8 237 aa12.31□□□□□ -0.44
RPAIN-209ENST00000571558 LINC00471Q8N535 108 aa12.31□□□□□ -0.44
RPAIN-209ENST00000571558 ELOA3Q8NG57 546 aa12.31□□□□□ -0.44
RPAIN-209ENST00000571558 OR10G2Q8NGC3 310 aa12.31□□□□□ -0.44
RPAIN-209ENST00000571558 OR9Q2Q8NGE9 314 aa12.31□□□□□ -0.44
RPAIN-209ENST00000571558 OR5M1Q8NGP8 315 aa12.31□□□□□ -0.44
RPAIN-209ENST00000571558 PFN4Q8NHR9 129 aa12.31□□□□□ -0.44
RPAIN-209ENST00000571558 GIPC3Q8TF64 312 aa12.31□□□□□ -0.44
RPAIN-209ENST00000571558 EME1Q96AY2 570 aa12.31□□□□□ -0.44
RPAIN-209ENST00000571558 SARAFQ96BY9 339 aa12.31□□□□□ -0.44
RPAIN-209ENST00000571558 FEVQ99581 238 aa12.31□□□□□ -0.44
RPAIN-209ENST00000571558 MDFIQ99750 246 aa12.31□□□□□ -0.44
RPAIN-209ENST00000571558 C9orf16Q9BUW7 83 aa12.31□□□□□ -0.44
RPAIN-209ENST00000571558 SLC19A3Q9BZV2 496 aa12.31□□□□□ -0.44
RPAIN-209ENST00000571558 COQ10BQ9H8M1 238 aa12.31□□□□□ -0.44
RPAIN-209ENST00000571558 SELENONQ9NZV5 590 aa12.31□□□□□ -0.44
RPAIN-209ENST00000571558 CSPG4Q6UVK1 2322 aa12.31□□□□□ -0.44
RPAIN-209ENST00000571558 NCKAP5O14513 1909 aa12.3□□□□□ -0.44
RPAIN-209ENST00000571558 TMEM72A0PK05 275 aa12.3□□□□□ -0.44
RPAIN-209ENST00000571558 OR2M5A3KFT3 312 aa12.3□□□□□ -0.44
RPAIN-209ENST00000571558 PIP5K1CO60331 668 aa12.3□□□□□ -0.44
RPAIN-209ENST00000571558 IGF2P01344 180 aa12.3□□□□□ -0.44
RPAIN-209ENST00000571558 ALPLP05186 524 aa12.3□□□□□ -0.44
RPAIN-209ENST00000571558 PTNP21246 168 aa12.3□□□□□ -0.44
RPAIN-209ENST00000571558 CXCR1P25024 350 aa12.3□□□□□ -0.44
RPAIN-209ENST00000571558 ELK4P28324 431 aa12.3□□□□□ -0.44
RPAIN-209ENST00000571558 OMPP47874 163 aa12.3□□□□□ -0.44
RPAIN-209ENST00000571558 DAPP51397 102 aa12.3□□□□□ -0.44
RPAIN-209ENST00000571558 ARHGDIAP52565 204 aa12.3□□□□□ -0.44
RPAIN-209ENST00000571558 GFRA1P56159 465 aa12.3□□□□□ -0.44
RPAIN-209ENST00000571558 PRKCDQ05655 676 aa12.3□□□□□ -0.44
RPAIN-209ENST00000571558 SNCBQ16143 134 aa12.3□□□□□ -0.44
RPAIN-209ENST00000571558 LRRC36Q1X8D7 754 aa12.3□□□□□ -0.44
RPAIN-209ENST00000571558 FBXL19-AS1Q494R0 122 aa12.3□□□□□ -0.44
RPAIN-209ENST00000571558 WLSQ5T9L3 541 aa12.3□□□□□ -0.44
RPAIN-209ENST00000571558 RTL6Q6ICC9 239 aa12.3□□□□□ -0.44
RPAIN-209ENST00000571558 PPP4R4Q6NUP7 873 aa12.3□□□□□ -0.44
RPAIN-209ENST00000571558 C1orf94Q6P1W5 598 aa12.3□□□□□ -0.44
RPAIN-209ENST00000571558 TTC33Q6PID6 262 aaPredicted RBP12.3□□□□□ -0.44
RPAIN-209ENST00000571558 POMZP3Q6PJE2 187 aa12.3□□□□□ -0.44
RPAIN-209ENST00000571558 ZNF730Q6ZMV8 503 aa12.3□□□□□ -0.44
RPAIN-209ENST00000571558 ZER1Q7Z7L7 766 aa12.3□□□□□ -0.44
RPAIN-209ENST00000571558 YRDCQ86U90 279 aaKnown RBP12.3□□□□□ -0.44
RPAIN-209ENST00000571558 LIX1LQ8IVB5 337 aa12.3□□□□□ -0.44
RPAIN-209ENST00000571558 P3H2Q8IVL5 708 aa12.3□□□□□ -0.44
RPAIN-209ENST00000571558 NRMQ8IXM6 262 aa12.3□□□□□ -0.44
RPAIN-209ENST00000571558 FAM109AQ8N4B1 249 aa12.3□□□□□ -0.44
RPAIN-209ENST00000571558 OR5M9Q8NGP3 310 aa12.3□□□□□ -0.44
RPAIN-209ENST00000571558 RNF217Q8TC41 542 aa12.3□□□□□ -0.44
RPAIN-209ENST00000571558 DTNBP1Q96EV8 351 aa12.3□□□□□ -0.44
RPAIN-209ENST00000571558 GPA33Q99795 319 aa12.3□□□□□ -0.44
RPAIN-209ENST00000571558 SMR3AQ99954 134 aa12.3□□□□□ -0.44
RPAIN-209ENST00000571558 REPIN1Q9BWE0 567 aaKnown RBP12.3□□□□□ -0.44
RPAIN-209ENST00000571558 OSBPL10Q9BXB5 764 aa12.3□□□□□ -0.44
RPAIN-209ENST00000571558 SMURF2Q9HAU4 748 aa12.3□□□□□ -0.44
RPAIN-209ENST00000571558 USE1Q9NZ43 259 aa12.3□□□□□ -0.44
RPAIN-209ENST00000571558 CHRNA9Q9UGM1 479 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 118.9 ms