RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 ZNF620Q6ZNG0 422 aa5.92□□□□□ -1.46
CTDNEP1-204ENST00000570484 HDDC2Q7Z4H3 204 aa5.92□□□□□ -1.46
CTDNEP1-204ENST00000570484 P4HA3Q7Z4N8 544 aa5.92□□□□□ -1.46
CTDNEP1-204ENST00000570484 GALNT5Q7Z7M9 940 aa5.92□□□□□ -1.46
CTDNEP1-204ENST00000570484 TMEM179BQ7Z7N9 219 aa5.92□□□□□ -1.46
CTDNEP1-204ENST00000570484 MCEMP1Q8IX19 187 aa5.92□□□□□ -1.46
CTDNEP1-204ENST00000570484 CISD2Q8N5K1 135 aaKnown RBP5.92□□□□□ -1.46
CTDNEP1-204ENST00000570484 SCAIQ8N9R8 606 aa5.92□□□□□ -1.46
CTDNEP1-204ENST00000570484 ZNF555Q8NEP9 628 aa5.92□□□□□ -1.46
CTDNEP1-204ENST00000570484 OR13C2Q8NGS9 318 aa5.92□□□□□ -1.46
CTDNEP1-204ENST00000570484 OR5J2Q8NH18 312 aa5.92□□□□□ -1.46
CTDNEP1-204ENST00000570484 OR10D3Q8NH80 312 aa5.92□□□□□ -1.46
CTDNEP1-204ENST00000570484 MFSD8Q8NHS3 518 aa5.92□□□□□ -1.46
CTDNEP1-204ENST00000570484 CPNE4Q96A23 557 aaPredicted RBP5.92□□□□□ -1.46
CTDNEP1-204ENST00000570484 MIB2Q96AX9 1013 aa5.92□□□□□ -1.46
CTDNEP1-204ENST00000570484 KTI12Q96EK9 354 aaPredicted RBP5.92□□□□□ -1.46
CTDNEP1-204ENST00000570484 ARL5BQ96KC2 179 aa5.92□□□□□ -1.46
CTDNEP1-204ENST00000570484 GPR137Q96N19 417 aa5.92□□□□□ -1.46
CTDNEP1-204ENST00000570484 RDH12Q96NR8 316 aa5.92□□□□□ -1.46
CTDNEP1-204ENST00000570484 TAAR6Q96RI8 345 aa5.92□□□□□ -1.46
CTDNEP1-204ENST00000570484 NPAS1Q99742 590 aa5.92□□□□□ -1.46
CTDNEP1-204ENST00000570484 NIPSNAP1Q9BPW8 284 aa5.92□□□□□ -1.46
CTDNEP1-204ENST00000570484 TACO1Q9BSH4 297 aaKnown RBP5.92□□□□□ -1.46
CTDNEP1-204ENST00000570484 NAA11Q9BSU3 229 aaPredicted RBP5.92□□□□□ -1.46
CTDNEP1-204ENST00000570484 FUZQ9BT04 418 aa5.92□□□□□ -1.46
CTDNEP1-204ENST00000570484 POTEKPQ9BYX7 375 aa5.92□□□□□ -1.46
CTDNEP1-204ENST00000570484 PRRG4Q9BZD6 226 aa5.92□□□□□ -1.46
CTDNEP1-204ENST00000570484 Q9H521 79 aa5.92□□□□□ -1.46
CTDNEP1-204ENST00000570484 COQ10BQ9H8M1 238 aa5.92□□□□□ -1.46
CTDNEP1-204ENST00000570484 SMURF2Q9HAU4 748 aa5.92□□□□□ -1.46
CTDNEP1-204ENST00000570484 MEPEQ9NQ76 525 aaPredicted RBP5.92□□□□□ -1.46
CTDNEP1-204ENST00000570484 C20orf141Q9NUB4 165 aa5.92□□□□□ -1.46
CTDNEP1-204ENST00000570484 USE1Q9NZ43 259 aa5.92□□□□□ -1.46
CTDNEP1-204ENST00000570484 MAGED1Q9Y5V3 778 aaPredicted RBP5.92□□□□□ -1.46
CTDNEP1-204ENST00000570484 CDH10Q9Y6N8 788 aa5.92□□□□□ -1.46
CTDNEP1-204ENST00000570484 SCN2AQ99250 2005 aa5.92□□□□□ -1.46
CTDNEP1-204ENST00000570484 SPTBN4Q9H254 2564 aa5.92□□□□□ -1.46
CTDNEP1-204ENST00000570484 CROCCQ5TZA2 2017 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 APC2O95996 2303 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 A0A1B0GTH9 108 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 A0A1W2PRG6 482 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 LIPT2A6NK58 231 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 EIF4E1BA6NMX2 242 aaKnown RBP5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 LRRN3E7EW58 273 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 NPIPA2E9PIF3 369 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 NPIPA3F8WFD2 350 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 BLOC1S5-TXNDC5H3BN57 136 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 M0R082 166 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 RNF13O43567 381 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 AKAP8O43823 692 aaKnown RBP5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 CXCL13O43927 109 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 NPIPB7O75200 414 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 NDUFB2O95178 105 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 PLGP00747 810 aaPredicted RBP5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 GASTP01350 101 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 BGLAPP02818 100 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 ALPLP05186 524 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 TPOP07202 933 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 ADORA3P0DMS8 318 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 OSMP13725 252 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 FUT1P19526 365 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 MAKP20794 623 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 FUT4P22083 530 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 ENPP1P22413 925 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 SHC1P29353 583 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 NOS3P29474 1203 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 GSSP48637 474 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 STARP49675 285 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 LHX2P50458 406 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 DAP3P51398 398 aaKnown RBP5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 AQP4P55087 323 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 CASP6P55212 293 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 CLDN15P56746 228 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 CARD18P57730 90 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 ESRRGP62508 458 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 HSF1Q00613 529 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 EGR4Q05215 589 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 PUDPQ08623 228 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 TOP3AQ13472 1001 aaPredicted RBP5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 C1DQ13901 141 aaKnown RBP5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 BCL2A1Q16548 175 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 C3AR1Q16581 482 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 SLC36A3Q495N2 470 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 ZBED5Q49AG3 693 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 ALG10Q5BKT4 473 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 NHSL2Q5HYW2 709 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 CLEC12AQ5QGZ9 265 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 KDM4DQ6B0I6 523 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 VASNQ6EMK4 673 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 ZNF770Q6IQ21 691 aaPredicted RBP5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 SMARCD3Q6STE5 483 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 PAQR6Q6TCH4 344 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 KLHL17Q6TDP4 642 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 GFRALQ6UXV0 394 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 TMPPEQ6ZT21 453 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 RASSF6Q6ZTQ3 369 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 TMPRSS11FQ6ZWK6 438 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 SLC46A3Q7Z3Q1 461 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 ZER1Q7Z7L7 766 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 GPAT4Q86UL3 456 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms