RNA–Protein interactions for RNA: ENST00000568626.1

FANCA-231, Transcript of FA complementation group A, human

TSL 3

Gene FANCA, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FANCA-231	ENST00000568626	HIST1H2AB	P04908	130 aa		10.74	□□□□□ -0.69
FANCA-231	ENST00000568626	ASAH2B	P0C7U1	165 aa		10.74	□□□□□ -0.69
FANCA-231	ENST00000568626	FPR3	P25089	353 aa		10.74	□□□□□ -0.69
FANCA-231	ENST00000568626	OMP	P47874	163 aa		10.74	□□□□□ -0.69
FANCA-231	ENST00000568626	MRPL49	Q13405	166 aa	Known RBP	10.74	□□□□□ -0.69
FANCA-231	ENST00000568626	PDK3	Q15120	406 aa		10.74	□□□□□ -0.69
FANCA-231	ENST00000568626	OTUD3	Q5T2D3	398 aa	Predicted RBP	10.74	□□□□□ -0.69
FANCA-231	ENST00000568626	ABLIM2	Q6H8Q1	611 aa		10.74	□□□□□ -0.69
FANCA-231	ENST00000568626	TMEM211	Q6ICI0	200 aa		10.74	□□□□□ -0.69
FANCA-231	ENST00000568626	PPP4R4	Q6NUP7	873 aa		10.74	□□□□□ -0.69
FANCA-231	ENST00000568626	C1orf94	Q6P1W5	598 aa		10.74	□□□□□ -0.69
FANCA-231	ENST00000568626	PGBD2	Q6P3X8	592 aa		10.74	□□□□□ -0.69
FANCA-231	ENST00000568626	MTFR2	Q6P444	385 aa		10.74	□□□□□ -0.69
FANCA-231	ENST00000568626	TBPL2	Q6SJ96	375 aa		10.74	□□□□□ -0.69
FANCA-231	ENST00000568626	H1FNT	Q75WM6	255 aa	Predicted RBP	10.74	□□□□□ -0.69
FANCA-231	ENST00000568626	FCRLA	Q7L513	359 aa		10.74	□□□□□ -0.69
FANCA-231	ENST00000568626	HIST3H2A	Q7L7L0	130 aa		10.74	□□□□□ -0.69
FANCA-231	ENST00000568626	SLC46A3	Q7Z3Q1	461 aa		10.74	□□□□□ -0.69
FANCA-231	ENST00000568626	ZDHHC13	Q8IUH4	622 aa		10.74	□□□□□ -0.69
FANCA-231	ENST00000568626	OR5J2	Q8NH18	312 aa		10.74	□□□□□ -0.69
FANCA-231	ENST00000568626	OR5K1	Q8NHB7	308 aa		10.74	□□□□□ -0.69
FANCA-231	ENST00000568626	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	10.74	□□□□□ -0.69
FANCA-231	ENST00000568626	ZNF417	Q8TAU3	575 aa		10.74	□□□□□ -0.69
FANCA-231	ENST00000568626	FNDC9	Q8TBE3	224 aa		10.74	□□□□□ -0.69
FANCA-231	ENST00000568626	GIPC3	Q8TF64	312 aa		10.74	□□□□□ -0.69
FANCA-231	ENST00000568626	DNAJC9	Q8WXX5	260 aa		10.74	□□□□□ -0.69
FANCA-231	ENST00000568626	HIST1H2AC	Q93077	130 aa		10.74	□□□□□ -0.69
FANCA-231	ENST00000568626	SLC25A36	Q96CQ1	311 aa		10.74	□□□□□ -0.69
FANCA-231	ENST00000568626	FAM46A	Q96IP4	442 aa	Known RBP	10.74	□□□□□ -0.69
FANCA-231	ENST00000568626	MOGAT1	Q96PD6	335 aa		10.74	□□□□□ -0.69
FANCA-231	ENST00000568626	ZNF587	Q96SQ5	575 aa	Predicted RBP	10.74	□□□□□ -0.69
FANCA-231	ENST00000568626	VKORC1	Q9BQB6	163 aa		10.74	□□□□□ -0.69
FANCA-231	ENST00000568626	SF3B5	Q9BWJ5	86 aa	Known RBP	10.74	□□□□□ -0.69
FANCA-231	ENST00000568626	GABARAPL1	Q9H0R8	117 aa		10.74	□□□□□ -0.69
FANCA-231	ENST00000568626	DCLRE1B	Q9H816	532 aa		10.74	□□□□□ -0.69
FANCA-231	ENST00000568626	NTN4	Q9HB63	628 aa		10.74	□□□□□ -0.69
FANCA-231	ENST00000568626	CHST11	Q9NPF2	352 aa		10.74	□□□□□ -0.69
FANCA-231	ENST00000568626	KLHL9	Q9P2J3	617 aa		10.74	□□□□□ -0.69
FANCA-231	ENST00000568626	TINAG	Q9UJW2	476 aa		10.74	□□□□□ -0.69
FANCA-231	ENST00000568626	MGAT4B	Q9UQ53	548 aa		10.74	□□□□□ -0.69
FANCA-231	ENST00000568626	OSGIN2	Q9Y236	505 aa		10.74	□□□□□ -0.69
FANCA-231	ENST00000568626	RASD1	Q9Y272	281 aa		10.74	□□□□□ -0.69
FANCA-231	ENST00000568626	FAM215A	Q9Y5M1	114 aa		10.74	□□□□□ -0.69
FANCA-231	ENST00000568626	CYSRT1	A8MQ03	144 aa		10.73	□□□□□ -0.69
FANCA-231	ENST00000568626		G3V2T6	193 aa		10.73	□□□□□ -0.69
FANCA-231	ENST00000568626	ZNHIT1	O43257	154 aa		10.73	□□□□□ -0.69
FANCA-231	ENST00000568626	CYTIP	O60759	359 aa		10.73	□□□□□ -0.69
FANCA-231	ENST00000568626	ANXA8	P13928	327 aa		10.73	□□□□□ -0.69
FANCA-231	ENST00000568626	ZNF23	P17027	643 aa		10.73	□□□□□ -0.69
FANCA-231	ENST00000568626	FUT1	P19526	365 aa		10.73	□□□□□ -0.69
FANCA-231	ENST00000568626	GSTM3	P21266	225 aa		10.73	□□□□□ -0.69
FANCA-231	ENST00000568626	TIMP3	P35625	211 aa		10.73	□□□□□ -0.69
FANCA-231	ENST00000568626	GPR4	P46093	362 aa		10.73	□□□□□ -0.69
FANCA-231	ENST00000568626	SLC16A1	P53985	500 aa		10.73	□□□□□ -0.69
FANCA-231	ENST00000568626	IST1	P53990	364 aa		10.73	□□□□□ -0.69
FANCA-231	ENST00000568626	RPS4X	P62701	263 aa	Known RBP	10.73	□□□□□ -0.69
FANCA-231	ENST00000568626	TSPAN31	Q12999	210 aa		10.73	□□□□□ -0.69
FANCA-231	ENST00000568626	PMS2P3	Q13401	168 aa		10.73	□□□□□ -0.69
FANCA-231	ENST00000568626	RCN1	Q15293	331 aa		10.73	□□□□□ -0.69
FANCA-231	ENST00000568626	POU4F3	Q15319	338 aa		10.73	□□□□□ -0.69
FANCA-231	ENST00000568626	EEF1A1P5	Q5VTE0	462 aa		10.73	□□□□□ -0.69
FANCA-231	ENST00000568626	RTL6	Q6ICC9	239 aa		10.73	□□□□□ -0.69
FANCA-231	ENST00000568626	ZNF770	Q6IQ21	691 aa	Predicted RBP	10.73	□□□□□ -0.69
FANCA-231	ENST00000568626	HMBOX1	Q6NT76	420 aa		10.73	□□□□□ -0.69
FANCA-231	ENST00000568626	RPTN	Q6XPR3	784 aa		10.73	□□□□□ -0.69
FANCA-231	ENST00000568626	ZER1	Q7Z7L7	766 aa		10.73	□□□□□ -0.69
FANCA-231	ENST00000568626	MCEMP1	Q8IX19	187 aa		10.73	□□□□□ -0.69
FANCA-231	ENST00000568626	AQP11	Q8NBQ7	271 aa		10.73	□□□□□ -0.69
FANCA-231	ENST00000568626	OR9Q2	Q8NGE9	314 aa		10.73	□□□□□ -0.69
FANCA-231	ENST00000568626	GNPDA2	Q8TDQ7	276 aa		10.73	□□□□□ -0.69
FANCA-231	ENST00000568626	RELT	Q969Z4	430 aa		10.73	□□□□□ -0.69
FANCA-231	ENST00000568626	PKP2	Q99959	881 aa		10.73	□□□□□ -0.69
FANCA-231	ENST00000568626	DGCR6L	Q9BY27	220 aa		10.73	□□□□□ -0.69
FANCA-231	ENST00000568626	RNF122	Q9H9V4	155 aa		10.73	□□□□□ -0.69
FANCA-231	ENST00000568626	ZNF556	Q9HAH1	456 aa		10.73	□□□□□ -0.69
FANCA-231	ENST00000568626	FANCF	Q9NPI8	374 aa		10.73	□□□□□ -0.69
FANCA-231	ENST00000568626	EMC3	Q9P0I2	261 aa		10.73	□□□□□ -0.69
FANCA-231	ENST00000568626	PDP1	Q9P0J1	537 aa	Predicted RBP	10.73	□□□□□ -0.69
FANCA-231	ENST00000568626	HIF3A	Q9Y2N7	669 aa		10.73	□□□□□ -0.69
FANCA-231	ENST00000568626	RRP15	Q9Y3B9	282 aa	Known RBP	10.73	□□□□□ -0.69
FANCA-231	ENST00000568626	IGKV3D-15	A0A087WSY6	115 aa		10.72	□□□□□ -0.69
FANCA-231	ENST00000568626	LOC102725191	A0A1B0GVB3	256 aa		10.72	□□□□□ -0.69
FANCA-231	ENST00000568626	LRRN3	E7EW58	273 aa		10.72	□□□□□ -0.69
FANCA-231	ENST00000568626	GPR171	O14626	319 aa		10.72	□□□□□ -0.69
FANCA-231	ENST00000568626	KLF4	O43474	513 aa		10.72	□□□□□ -0.69
FANCA-231	ENST00000568626	AKR7A3	O95154	331 aa		10.72	□□□□□ -0.69
FANCA-231	ENST00000568626	BAG2	O95816	211 aa		10.72	□□□□□ -0.69
FANCA-231	ENST00000568626	TGM6	O95932	706 aa		10.72	□□□□□ -0.69
FANCA-231	ENST00000568626	IL2RA	P01589	272 aa		10.72	□□□□□ -0.69
FANCA-231	ENST00000568626	CRH	P06850	196 aa		10.72	□□□□□ -0.69
FANCA-231	ENST00000568626	MAK	P20794	623 aa		10.72	□□□□□ -0.69
FANCA-231	ENST00000568626	CBL	P22681	906 aa		10.72	□□□□□ -0.69
FANCA-231	ENST00000568626	GNLY	P22749	145 aa		10.72	□□□□□ -0.69
FANCA-231	ENST00000568626	GSS	P48637	474 aa		10.72	□□□□□ -0.69
FANCA-231	ENST00000568626	PRPS1	P60891	318 aa		10.72	□□□□□ -0.69
FANCA-231	ENST00000568626	LSM11	P83369	360 aa	Known RBP eCLIP	10.72	□□□□□ -0.69	8e-7	■■■□□ 15
FANCA-231	ENST00000568626	LTB	Q06643	244 aa		10.72	□□□□□ -0.69
FANCA-231	ENST00000568626	PUDP	Q08623	228 aa		10.72	□□□□□ -0.69
FANCA-231	ENST00000568626	COX10	Q12887	443 aa		10.72	□□□□□ -0.69
FANCA-231	ENST00000568626	PPP1R8	Q12972	351 aa	Known RBP	10.72	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms