RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 GPER1Q99527 375 aa10.07□□□□□ -0.8
PALB2-206ENST00000568219 ENKD1Q9H0I2 346 aa10.07□□□□□ -0.8
PALB2-206ENST00000568219 FZD3Q9NPG1 666 aa10.07□□□□□ -0.8
PALB2-206ENST00000568219 ACSS1Q9NUB1 689 aaPredicted RBP10.07□□□□□ -0.8
PALB2-206ENST00000568219 ZNF629Q9UEG4 869 aaPredicted RBP10.07□□□□□ -0.8
PALB2-206ENST00000568219 PCDHB10Q9UN67 800 aa10.07□□□□□ -0.8
PALB2-206ENST00000568219 SCN3AQ9NY46 2000 aa10.07□□□□□ -0.8
PALB2-206ENST00000568219 CARNS1A5YM72 827 aa10.07□□□□□ -0.8
PALB2-206ENST00000568219 IFITM5A6NNB3 132 aa10.07□□□□□ -0.8
PALB2-206ENST00000568219 ZNF736B4DX44 427 aaPredicted RBP10.07□□□□□ -0.8
PALB2-206ENST00000568219 PLGP00747 810 aaPredicted RBP10.07□□□□□ -0.8
PALB2-206ENST00000568219 ZDHHC11BP0C7U3 371 aa10.07□□□□□ -0.8
PALB2-206ENST00000568219 MAPK3P27361 379 aaPredicted RBP10.07□□□□□ -0.8
PALB2-206ENST00000568219 MEOX2P50222 304 aa10.07□□□□□ -0.8
PALB2-206ENST00000568219 CAPZA1P52907 286 aa10.07□□□□□ -0.8
PALB2-206ENST00000568219 RPS27AP62979 156 aaKnown RBP10.07□□□□□ -0.8
PALB2-206ENST00000568219 UBA52P62987 128 aaKnown RBP10.07□□□□□ -0.8
PALB2-206ENST00000568219 EEF1A2Q05639 463 aaKnown RBP10.07□□□□□ -0.8
PALB2-206ENST00000568219 ARFRP1Q13795 201 aa10.07□□□□□ -0.8
PALB2-206ENST00000568219 MANEAQ5SRI9 462 aa10.07□□□□□ -0.8
PALB2-206ENST00000568219 ARHGAP11AQ6P4F7 1023 aa10.07□□□□□ -0.8
PALB2-206ENST00000568219 COMTD1Q86VU5 262 aa10.07□□□□□ -0.8
PALB2-206ENST00000568219 LRRC25Q8N386 305 aaPredicted RBP10.07□□□□□ -0.8
PALB2-206ENST00000568219 OR4C16Q8NGL9 310 aa10.07□□□□□ -0.8
PALB2-206ENST00000568219 HSD17B8Q92506 261 aa10.07□□□□□ -0.8
PALB2-206ENST00000568219 IRF7Q92985 503 aa10.07□□□□□ -0.8
PALB2-206ENST00000568219 GDF15Q99988 308 aa10.07□□□□□ -0.8
PALB2-206ENST00000568219 SLC38A1Q9H2H9 487 aa10.07□□□□□ -0.8
PALB2-206ENST00000568219 RETREG1Q9H6L5 497 aa10.07□□□□□ -0.8
PALB2-206ENST00000568219 FKRPQ9H9S5 495 aa10.07□□□□□ -0.8
PALB2-206ENST00000568219 TAS2R8Q9NYW2 309 aa10.07□□□□□ -0.8
PALB2-206ENST00000568219 ATXN7L1Q9ULK2 861 aaPredicted RBP10.07□□□□□ -0.8
PALB2-206ENST00000568219 CCL26Q9Y258 94 aa10.07□□□□□ -0.8
PALB2-206ENST00000568219 ZNF281Q9Y2X9 895 aa10.07□□□□□ -0.8
PALB2-206ENST00000568219 KCNMB2Q9Y691 235 aa10.07□□□□□ -0.8
PALB2-206ENST00000568219 SIGLEC6O43699 453 aa10.07□□□□□ -0.8
PALB2-206ENST00000568219 F13BP05160 661 aa10.07□□□□□ -0.8
PALB2-206ENST00000568219 SPARCP09486 303 aa10.07□□□□□ -0.8
PALB2-206ENST00000568219 LIMS1P48059 325 aa10.07□□□□□ -0.8
PALB2-206ENST00000568219 RAB13P51153 203 aa10.07□□□□□ -0.8
PALB2-206ENST00000568219 P2RX1P51575 399 aa10.07□□□□□ -0.8
PALB2-206ENST00000568219 DECR1Q16698 335 aa10.07□□□□□ -0.8
PALB2-206ENST00000568219 STEAP1BQ6NZ63 245 aa10.07□□□□□ -0.8
PALB2-206ENST00000568219 THSD4Q6ZMP0 1018 aa10.07□□□□□ -0.8
PALB2-206ENST00000568219 STX12Q86Y82 276 aa10.07□□□□□ -0.8
PALB2-206ENST00000568219 LNX2Q8N448 690 aa10.07□□□□□ -0.8
PALB2-206ENST00000568219 PLPP7Q8NBV4 271 aa10.07□□□□□ -0.8
PALB2-206ENST00000568219 MORN4Q8NDC4 146 aa10.07□□□□□ -0.8
PALB2-206ENST00000568219 OR1S2Q8NGQ3 325 aa10.07□□□□□ -0.8
PALB2-206ENST00000568219 GAL3ST3Q96A11 431 aa10.07□□□□□ -0.8
PALB2-206ENST00000568219 GAS2L1Q99501 681 aaPredicted RBP10.07□□□□□ -0.8
PALB2-206ENST00000568219 HEXA-AS1Q9H8Q6 139 aa10.07□□□□□ -0.8
PALB2-206ENST00000568219 MED17Q9NVC6 651 aa10.07□□□□□ -0.8
PALB2-206ENST00000568219 SPHK1Q9NYA1 384 aa10.07□□□□□ -0.8
PALB2-206ENST00000568219 IL20Q9NYY1 176 aa10.07□□□□□ -0.8
PALB2-206ENST00000568219 Q9Y3F1 56 aa10.07□□□□□ -0.8
PALB2-206ENST00000568219 FAM186AA6NE01 2351 aa10.06□□□□□ -0.8
PALB2-206ENST00000568219 A0A1W2PR48 441 aa10.06□□□□□ -0.8
PALB2-206ENST00000568219 ZNF208O43345 1280 aa10.06□□□□□ -0.8
PALB2-206ENST00000568219 SERPINA5P05154 406 aa10.06□□□□□ -0.8
PALB2-206ENST00000568219 FABP1P07148 127 aa10.06□□□□□ -0.8
PALB2-206ENST00000568219 ZNF10P21506 573 aaPredicted RBP10.06□□□□□ -0.8
PALB2-206ENST00000568219 NME2P22392 152 aa10.06□□□□□ -0.8
PALB2-206ENST00000568219 ZP1P60852 638 aa10.06□□□□□ -0.8
PALB2-206ENST00000568219 RAB33AQ14088 237 aa10.06□□□□□ -0.8
PALB2-206ENST00000568219 TSC22D1Q15714 1073 aa10.06□□□□□ -0.8
PALB2-206ENST00000568219 NKAPLQ5M9Q1 402 aa10.06□□□□□ -0.8
PALB2-206ENST00000568219 EOGTQ5NDL2 527 aa10.06□□□□□ -0.8
PALB2-206ENST00000568219 OR10K2Q6IF99 312 aa10.06□□□□□ -0.8
PALB2-206ENST00000568219 SLC35D2Q76EJ3 337 aa10.06□□□□□ -0.8
PALB2-206ENST00000568219 FAM219AQ8IW50 185 aa10.06□□□□□ -0.8
PALB2-206ENST00000568219 OR11G2Q8NGC1 345 aa10.06□□□□□ -0.8
PALB2-206ENST00000568219 OR2L2Q8NH16 312 aa10.06□□□□□ -0.8
PALB2-206ENST00000568219 NR4A3Q92570 626 aa10.06□□□□□ -0.8
PALB2-206ENST00000568219 MOAP1Q96BY2 351 aa10.06□□□□□ -0.8
PALB2-206ENST00000568219 MAN2C1Q9NTJ4 1040 aa10.06□□□□□ -0.8
PALB2-206ENST00000568219 MARCH5Q9NX47 278 aa10.06□□□□□ -0.8
PALB2-206ENST00000568219 FAM96BQ9Y3D0 163 aa10.06□□□□□ -0.8
PALB2-206ENST00000568219 PCDHGA5Q9Y5G8 931 aa10.06□□□□□ -0.8
PALB2-206ENST00000568219 A0A1B0GTH9 108 aa10.06□□□□□ -0.8
PALB2-206ENST00000568219 B3GALT2O43825 422 aa10.06□□□□□ -0.8
PALB2-206ENST00000568219 CDC40O60508 579 aaKnown RBP eCLIP10.06□□□□□ -0.8
PALB2-206ENST00000568219 LATS1O95835 1130 aa10.06□□□□□ -0.8
PALB2-206ENST00000568219 CSF1P09603 554 aa10.06□□□□□ -0.8
PALB2-206ENST00000568219 HOXB9P17482 250 aaPredicted RBP10.06□□□□□ -0.8
PALB2-206ENST00000568219 CNR1P21554 472 aa10.06□□□□□ -0.8
PALB2-206ENST00000568219 FRKP42685 505 aaPredicted RBP10.06□□□□□ -0.8
PALB2-206ENST00000568219 OR3A2P47893 321 aa10.06□□□□□ -0.8
PALB2-206ENST00000568219 RGS7BPQ6MZT1 257 aaPredicted RBP10.06□□□□□ -0.8
PALB2-206ENST00000568219 RPL22L1Q6P5R6 122 aaKnown RBP10.06□□□□□ -0.8
PALB2-206ENST00000568219 OOSP2Q86WS3 158 aa10.06□□□□□ -0.8
PALB2-206ENST00000568219 NRROSQ86YC3 692 aa10.06□□□□□ -0.8
PALB2-206ENST00000568219 CPXM2Q8N436 756 aa10.06□□□□□ -0.8
PALB2-206ENST00000568219 CNRIP1Q96F85 164 aaPredicted RBP10.06□□□□□ -0.8
PALB2-206ENST00000568219 SGIP1Q9BQI5 828 aa10.06□□□□□ -0.8
PALB2-206ENST00000568219 HCFC1R1Q9NWW0 138 aa10.06□□□□□ -0.8
PALB2-206ENST00000568219 ING1Q9UK53 422 aaPredicted RBP10.06□□□□□ -0.8
PALB2-206ENST00000568219 MFSD2BA6NFX1 497 aa10.06□□□□□ -0.8
PALB2-206ENST00000568219 NDUFB2O95178 105 aa10.06□□□□□ -0.8
PALB2-206ENST00000568219 ADRB3P13945 408 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms