RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 ZNF573Q86YE8 665 aa1.21□□□□□ -2.22
CDH1-211ENST00000567320 ZNF679Q8IYX0 411 aa1.21□□□□□ -2.22
CDH1-211ENST00000567320 OR5AU1Q8NGC0 362 aa1.21□□□□□ -2.22
CDH1-211ENST00000567320 OR4K14Q8NGD5 310 aa1.21□□□□□ -2.22
CDH1-211ENST00000567320 OR52E1Q8NGJ3 308 aa1.21□□□□□ -2.22
CDH1-211ENST00000567320 OR2G3Q8NGZ4 309 aa1.21□□□□□ -2.22
CDH1-211ENST00000567320 DQX1Q8TE96 717 aaKnown RBP1.21□□□□□ -2.22
CDH1-211ENST00000567320 ATP6V1E2Q96A05 226 aa1.21□□□□□ -2.22
CDH1-211ENST00000567320 SEC22AQ96IW7 307 aa1.21□□□□□ -2.22
CDH1-211ENST00000567320 DOK1Q99704 481 aa1.21□□□□□ -2.22
CDH1-211ENST00000567320 SLC6A7Q99884 636 aa1.21□□□□□ -2.22
CDH1-211ENST00000567320 ACTR6Q9GZN1 396 aa1.21□□□□□ -2.22
CDH1-211ENST00000567320 NXF5Q9H1B4 397 aaKnown RBP1.21□□□□□ -2.22
CDH1-211ENST00000567320 RNF167Q9H6Y7 350 aa1.21□□□□□ -2.22
CDH1-211ENST00000567320 ROPN1Q9HAT0 212 aaPredicted RBP1.21□□□□□ -2.22
CDH1-211ENST00000567320 SDK2Q58EX2 2172 aa1.21□□□□□ -2.22
CDH1-211ENST00000567320 SHANK1Q9Y566 2161 aa1.2□□□□□ -2.22
CDH1-211ENST00000567320 NSG1A0A0A6YYJ2 146 aa1.2□□□□□ -2.22
CDH1-211ENST00000567320 C12orf71A8MTZ7 269 aa1.2□□□□□ -2.22
CDH1-211ENST00000567320 H3BNH8 94 aa1.2□□□□□ -2.22
CDH1-211ENST00000567320 XKRYO14609 159 aa1.2□□□□□ -2.22
CDH1-211ENST00000567320 KINO60870 393 aaKnown RBP1.2□□□□□ -2.22
CDH1-211ENST00000567320 TRIM16O95361 564 aa1.2□□□□□ -2.22
CDH1-211ENST00000567320 OLFM2O95897 454 aa1.2□□□□□ -2.22
CDH1-211ENST00000567320 ALDOBP05062 364 aa1.2□□□□□ -2.22
CDH1-211ENST00000567320 OMGP23515 440 aa1.2□□□□□ -2.22
CDH1-211ENST00000567320 KIF5BP33176 963 aa1.2□□□□□ -2.22
CDH1-211ENST00000567320 PTGDSP41222 190 aa1.2□□□□□ -2.22
CDH1-211ENST00000567320 GPM6AP51674 278 aa1.2□□□□□ -2.22
CDH1-211ENST00000567320 ZBED5Q49AG3 693 aa1.2□□□□□ -2.22
CDH1-211ENST00000567320 RNF139Q8WU17 664 aa1.2□□□□□ -2.22
CDH1-211ENST00000567320 KRT35Q92764 455 aa1.2□□□□□ -2.22
CDH1-211ENST00000567320 CMTM7Q96FZ5 175 aa1.2□□□□□ -2.22
CDH1-211ENST00000567320 COL21A1Q96P44 957 aa1.2□□□□□ -2.22
CDH1-211ENST00000567320 SLC35A5Q9BS91 424 aa1.2□□□□□ -2.22
CDH1-211ENST00000567320 ALG12Q9BV10 488 aa1.2□□□□□ -2.22
CDH1-211ENST00000567320 RHBGQ9H310 441 aa1.2□□□□□ -2.22
CDH1-211ENST00000567320 MID1IP1Q9NPA3 183 aa1.2□□□□□ -2.22
CDH1-211ENST00000567320 CTPS2Q9NRF8 586 aa1.2□□□□□ -2.22
CDH1-211ENST00000567320 GLRX2Q9NS18 164 aa1.2□□□□□ -2.22
CDH1-211ENST00000567320 KCNIP1Q9NZI2 227 aa1.2□□□□□ -2.22
CDH1-211ENST00000567320 FOXJ3Q9UPW0 622 aa1.2□□□□□ -2.22
CDH1-211ENST00000567320 FRMPD4Q14CM0 1322 aa1.19□□□□□ -2.22
CDH1-211ENST00000567320 A0A1B0GVX0 72 aa1.19□□□□□ -2.22
CDH1-211ENST00000567320 CIB4A0PJX0 185 aa1.19□□□□□ -2.22
CDH1-211ENST00000567320 RAD51BO15315 384 aa1.19□□□□□ -2.22
CDH1-211ENST00000567320 UGT1A9O60656 530 aa1.19□□□□□ -2.22
CDH1-211ENST00000567320 B3GAT3O94766 335 aa1.19□□□□□ -2.22
CDH1-211ENST00000567320 BGLAPP02818 100 aa1.19□□□□□ -2.22
CDH1-211ENST00000567320 OPN1LWP04000 364 aa1.19□□□□□ -2.22
CDH1-211ENST00000567320 LGALS2P05162 132 aa1.19□□□□□ -2.22
CDH1-211ENST00000567320 GLAP06280 429 aa1.19□□□□□ -2.22
CDH1-211ENST00000567320 POLR2EP19388 210 aaKnown RBP1.19□□□□□ -2.22
CDH1-211ENST00000567320 AHCYP23526 432 aa1.19□□□□□ -2.22
CDH1-211ENST00000567320 CMA1P23946 247 aa1.19□□□□□ -2.22
CDH1-211ENST00000567320 SFNP31947 248 aa1.19□□□□□ -2.22
CDH1-211ENST00000567320 ZNF816Q0VGE8 651 aaPredicted RBP1.19□□□□□ -2.22
CDH1-211ENST00000567320 PIGHQ14442 188 aaPredicted RBP1.19□□□□□ -2.22
CDH1-211ENST00000567320 CENPUQ71F23 418 aa1.19□□□□□ -2.22
CDH1-211ENST00000567320 NLRP9Q7RTR0 991 aa1.19□□□□□ -2.22
CDH1-211ENST00000567320 BHLHA15Q7RTS1 189 aaPredicted RBP1.19□□□□□ -2.22
CDH1-211ENST00000567320 THOC6Q86W42 341 aaKnown RBP1.19□□□□□ -2.22
CDH1-211ENST00000567320 C15orf56Q8N910 161 aa1.19□□□□□ -2.22
CDH1-211ENST00000567320 GATSQ8NAP1 163 aa1.19□□□□□ -2.22
CDH1-211ENST00000567320 OR5L2Q8NGL0 311 aa1.19□□□□□ -2.22
CDH1-211ENST00000567320 NANPQ8TBE9 248 aa1.19□□□□□ -2.22
CDH1-211ENST00000567320 HTR3CQ8WXA8 447 aa1.19□□□□□ -2.22
CDH1-211ENST00000567320 MYLPFQ96A32 169 aa1.19□□□□□ -2.22
CDH1-211ENST00000567320 TVP23CQ96ET8 276 aa1.19□□□□□ -2.22
CDH1-211ENST00000567320 RPP21Q9H633 154 aaKnown RBP1.19□□□□□ -2.22
CDH1-211ENST00000567320 SYTL2Q9HCH5 934 aa1.19□□□□□ -2.22
CDH1-211ENST00000567320 IL26Q9NPH9 171 aa1.19□□□□□ -2.22
CDH1-211ENST00000567320 GPATCH2LQ9NWQ4 482 aa1.19□□□□□ -2.22
CDH1-211ENST00000567320 CD84Q9UIB8 345 aa1.19□□□□□ -2.22
CDH1-211ENST00000567320 S4R3C0 116 aa1.19□□□□□ -2.22
CDH1-211ENST00000567320 TENM1Q9UKZ4 2725 aa1.19□□□□□ -2.22
CDH1-211ENST00000567320 CUX2O14529 1486 aa1.18□□□□□ -2.22
CDH1-211ENST00000567320 ADGRL1O94910 1474 aa1.18□□□□□ -2.22
CDH1-211ENST00000567320 SHROOM3Q8TF72 1996 aa1.18□□□□□ -2.22
CDH1-211ENST00000567320 TOM1L1O75674 476 aa1.18□□□□□ -2.22
CDH1-211ENST00000567320 CCNKO75909 580 aa1.18□□□□□ -2.22
CDH1-211ENST00000567320 SLC25A14O95258 325 aaPredicted RBP1.18□□□□□ -2.22
CDH1-211ENST00000567320 HSD17B7P56937 341 aa1.18□□□□□ -2.22
CDH1-211ENST00000567320 ESRRGP62508 458 aa1.18□□□□□ -2.22
CDH1-211ENST00000567320 TRIP10Q15642 601 aa1.18□□□□□ -2.22
CDH1-211ENST00000567320 VAX1Q5SQQ9 334 aa1.18□□□□□ -2.22
CDH1-211ENST00000567320 TMEM225Q6GV28 225 aa1.18□□□□□ -2.22
CDH1-211ENST00000567320 WDR86Q86TI4 376 aa1.18□□□□□ -2.22
CDH1-211ENST00000567320 BIVMQ86UB2 503 aa1.18□□□□□ -2.22
CDH1-211ENST00000567320 CBWD2Q8IUF1 395 aa1.18□□□□□ -2.22
CDH1-211ENST00000567320 ZDHHC21Q8IVQ6 265 aa1.18□□□□□ -2.22
CDH1-211ENST00000567320 RNF148Q8N7C7 305 aa1.18□□□□□ -2.22
CDH1-211ENST00000567320 NECAP1Q8NC96 275 aa1.18□□□□□ -2.22
CDH1-211ENST00000567320 PHOSPHO2Q8TCD6 241 aa1.18□□□□□ -2.22
CDH1-211ENST00000567320 VPS35Q96QK1 796 aa1.18□□□□□ -2.22
CDH1-211ENST00000567320 ZNF717Q9BY31 904 aaPredicted RBP1.18□□□□□ -2.22
CDH1-211ENST00000567320 XPO4Q9C0E2 1151 aaKnown RBP1.18□□□□□ -2.22
CDH1-211ENST00000567320 WDR76Q9H967 626 aa1.18□□□□□ -2.22
CDH1-211ENST00000567320 AGPAT5Q9NUQ2 364 aa1.18□□□□□ -2.22
CDH1-211ENST00000567320 FAM230AA0A1W2PPH8 454 aa1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms