RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 RRM2BQ7LG56 351 aa10.85□□□□□ -0.67
SF3B3-208ENST00000567250 GALNT5Q7Z7M9 940 aa10.85□□□□□ -0.67
SF3B3-208ENST00000567250 TSPYL5Q86VY4 417 aaPredicted RBP10.85□□□□□ -0.67
SF3B3-208ENST00000567250 NKAIN4Q8IVV8 208 aa10.85□□□□□ -0.67
SF3B3-208ENST00000567250 RELL2Q8NC24 303 aaPredicted RBP10.85□□□□□ -0.67
SF3B3-208ENST00000567250 PIK3C3Q8NEB9 887 aa10.85□□□□□ -0.67
SF3B3-208ENST00000567250 TMEM255BQ8WV15 326 aa10.85□□□□□ -0.67
SF3B3-208ENST00000567250 ACOT11Q8WXI4 607 aaPredicted RBP10.85□□□□□ -0.67
SF3B3-208ENST00000567250 SEPHS2Q99611 448 aa10.85□□□□□ -0.67
SF3B3-208ENST00000567250 PIP5K1AQ99755 562 aa10.85□□□□□ -0.67
SF3B3-208ENST00000567250 PRSS27Q9BQR3 290 aa10.85□□□□□ -0.67
SF3B3-208ENST00000567250 CHST11Q9NPF2 352 aa10.85□□□□□ -0.67
SF3B3-208ENST00000567250 IL1RAPQ9NPH3 570 aa10.85□□□□□ -0.67
SF3B3-208ENST00000567250 NANSQ9NR45 359 aa10.85□□□□□ -0.67
SF3B3-208ENST00000567250 NDUFAF4Q9P032 175 aa10.85□□□□□ -0.67
SF3B3-208ENST00000567250 SLC7A8Q9UHI5 535 aa10.85□□□□□ -0.67
SF3B3-208ENST00000567250 ZNF229Q9UJW7 825 aa10.85□□□□□ -0.67
SF3B3-208ENST00000567250 CLEC4AQ9UMR7 237 aa10.85□□□□□ -0.67
SF3B3-208ENST00000567250 RASD1Q9Y272 281 aa10.85□□□□□ -0.67
SF3B3-208ENST00000567250 HCFC1P51610 2035 aa10.85□□□□□ -0.67
SF3B3-208ENST00000567250 A0A1W2PRQ8 180 aa10.84□□□□□ -0.67
SF3B3-208ENST00000567250 DHRS12A0PJE2 317 aa10.84□□□□□ -0.67
SF3B3-208ENST00000567250 ENO4A6NNW6 628 aa10.84□□□□□ -0.67
SF3B3-208ENST00000567250 ZNF716A6NP11 495 aa10.84□□□□□ -0.67
SF3B3-208ENST00000567250 M0R082 166 aa10.84□□□□□ -0.67
SF3B3-208ENST00000567250 MSTNO14793 375 aa10.84□□□□□ -0.67
SF3B3-208ENST00000567250 SMNDC1O75940 238 aaKnown RBP eCLIP10.84□□□□□ -0.67
SF3B3-208ENST00000567250 PRSS23O95084 383 aa10.84□□□□□ -0.67
SF3B3-208ENST00000567250 AKR7A3O95154 331 aa10.84□□□□□ -0.67
SF3B3-208ENST00000567250 BGLAPP02818 100 aa10.84□□□□□ -0.67
SF3B3-208ENST00000567250 HIST1H2ABP04908 130 aa10.84□□□□□ -0.67
SF3B3-208ENST00000567250 RAP2AP10114 183 aa10.84□□□□□ -0.67
SF3B3-208ENST00000567250 PTNP21246 168 aa10.84□□□□□ -0.67
SF3B3-208ENST00000567250 GRPRP30550 384 aa10.84□□□□□ -0.67
SF3B3-208ENST00000567250 MAGEA2P43356 314 aa10.84□□□□□ -0.67
SF3B3-208ENST00000567250 KIR2DL2P43627 348 aaPredicted RBP10.84□□□□□ -0.67
SF3B3-208ENST00000567250 UGT2B15P54855 530 aa10.84□□□□□ -0.67
SF3B3-208ENST00000567250 SPIBQ01892 262 aa10.84□□□□□ -0.67
SF3B3-208ENST00000567250 DGCR6Q14129 220 aa10.84□□□□□ -0.67
SF3B3-208ENST00000567250 POU4F3Q15319 338 aa10.84□□□□□ -0.67
SF3B3-208ENST00000567250 ZNF74Q16587 644 aa10.84□□□□□ -0.67
SF3B3-208ENST00000567250 FBXL19-AS1Q494R0 122 aa10.84□□□□□ -0.67
SF3B3-208ENST00000567250 FGD3Q5JSP0 725 aa10.84□□□□□ -0.67
SF3B3-208ENST00000567250 C1orf146Q5VVC0 180 aa10.84□□□□□ -0.67
SF3B3-208ENST00000567250 VWA1Q6PCB0 445 aa10.84□□□□□ -0.67
SF3B3-208ENST00000567250 ZNF730Q6ZMV8 503 aa10.84□□□□□ -0.67
SF3B3-208ENST00000567250 HIST3H2AQ7L7L0 130 aa10.84□□□□□ -0.67
SF3B3-208ENST00000567250 PIWIL3Q7Z3Z3 882 aaKnown RBP10.84□□□□□ -0.67
SF3B3-208ENST00000567250 NANOGNBQ7Z5D8 188 aa10.84□□□□□ -0.67
SF3B3-208ENST00000567250 GPAT4Q86UL3 456 aa10.84□□□□□ -0.67
SF3B3-208ENST00000567250 SPATA24Q86W54 205 aa10.84□□□□□ -0.67
SF3B3-208ENST00000567250 P3H2Q8IVL5 708 aa10.84□□□□□ -0.67
SF3B3-208ENST00000567250 TUSC5Q8IXB3 177 aa10.84□□□□□ -0.67
SF3B3-208ENST00000567250 CDK20Q8IZL9 346 aa10.84□□□□□ -0.67
SF3B3-208ENST00000567250 RNF113BQ8IZP6 322 aaKnown RBP10.84□□□□□ -0.67
SF3B3-208ENST00000567250 TMEM99Q8N816 258 aa10.84□□□□□ -0.67
SF3B3-208ENST00000567250 ZNF454Q8N9F8 522 aa10.84□□□□□ -0.67
SF3B3-208ENST00000567250 ZNF417Q8TAU3 575 aa10.84□□□□□ -0.67
SF3B3-208ENST00000567250 HIST1H2ACQ93077 130 aa10.84□□□□□ -0.67
SF3B3-208ENST00000567250 TAAR8Q969N4 342 aa10.84□□□□□ -0.67
SF3B3-208ENST00000567250 RSRC1Q96IZ7 334 aaKnown RBP10.84□□□□□ -0.67
SF3B3-208ENST00000567250 C7orf34Q96L11 122 aa10.84□□□□□ -0.67
SF3B3-208ENST00000567250 ZNF587Q96SQ5 575 aaPredicted RBP10.84□□□□□ -0.67
SF3B3-208ENST00000567250 YY1AP1Q9H869 796 aa10.84□□□□□ -0.67
SF3B3-208ENST00000567250 NMNAT1Q9HAN9 279 aaPredicted RBP10.84□□□□□ -0.67
SF3B3-208ENST00000567250 MAN2C1Q9NTJ4 1040 aa10.84□□□□□ -0.67
SF3B3-208ENST00000567250 MRPL39Q9NYK5 338 aaKnown RBP10.84□□□□□ -0.67
SF3B3-208ENST00000567250 RHCGQ9UBD6 479 aa10.84□□□□□ -0.67
SF3B3-208ENST00000567250 AURKCQ9UQB9 309 aa10.84□□□□□ -0.67
SF3B3-208ENST00000567250 TMEM5Q9Y2B1 443 aa10.84□□□□□ -0.67
SF3B3-208ENST00000567250 COL12A1Q99715 3063 aa10.84□□□□□ -0.67
SF3B3-208ENST00000567250 NKX2-6A6NCS4 301 aa10.83□□□□□ -0.68
SF3B3-208ENST00000567250 PRSS44E7EML9 344 aa10.83□□□□□ -0.68
SF3B3-208ENST00000567250 FFAR1O14842 300 aa10.83□□□□□ -0.68
SF3B3-208ENST00000567250 OR6A2O95222 327 aa10.83□□□□□ -0.68
SF3B3-208ENST00000567250 GADD45GO95257 159 aa10.83□□□□□ -0.68
SF3B3-208ENST00000567250 CH25HO95992 272 aa10.83□□□□□ -0.68
SF3B3-208ENST00000567250 ZNF43P17038 809 aa10.83□□□□□ -0.68
SF3B3-208ENST00000567250 IL1RL1Q01638 556 aa10.83□□□□□ -0.68
SF3B3-208ENST00000567250 PMS2P3Q13401 168 aa10.83□□□□□ -0.68
SF3B3-208ENST00000567250 GK3PQ14409 553 aa10.83□□□□□ -0.68
SF3B3-208ENST00000567250 SLC17A1Q14916 467 aa10.83□□□□□ -0.68
SF3B3-208ENST00000567250 TAF11Q15544 211 aa10.83□□□□□ -0.68
SF3B3-208ENST00000567250 BEND4Q6ZU67 534 aa10.83□□□□□ -0.68
SF3B3-208ENST00000567250 MBOAT2Q6ZWT7 520 aa10.83□□□□□ -0.68
SF3B3-208ENST00000567250 H1FNTQ75WM6 255 aaPredicted RBP10.83□□□□□ -0.68
SF3B3-208ENST00000567250 ASRGL1Q7L266 308 aa10.83□□□□□ -0.68
SF3B3-208ENST00000567250 YTHDF3Q7Z739 585 aaKnown RBP10.83□□□□□ -0.68
SF3B3-208ENST00000567250 LUZP2Q86TE4 346 aa10.83□□□□□ -0.68
SF3B3-208ENST00000567250 LIX1LQ8IVB5 337 aa10.83□□□□□ -0.68
SF3B3-208ENST00000567250 CCDC103Q8IW40 242 aa10.83□□□□□ -0.68
SF3B3-208ENST00000567250 OR9K2Q8NGE7 335 aa10.83□□□□□ -0.68
SF3B3-208ENST00000567250 OR5J2Q8NH18 312 aa10.83□□□□□ -0.68
SF3B3-208ENST00000567250 STARD4Q96DR4 205 aa10.83□□□□□ -0.68
SF3B3-208ENST00000567250 SGTBQ96EQ0 304 aa10.83□□□□□ -0.68
SF3B3-208ENST00000567250 NDEL1Q9GZM8 345 aa10.83□□□□□ -0.68
SF3B3-208ENST00000567250 SLC24A3Q9HC58 644 aa10.83□□□□□ -0.68
SF3B3-208ENST00000567250 PARPBPQ9NWS1 579 aa10.83□□□□□ -0.68
SF3B3-208ENST00000567250 JKAMPQ9P055 326 aa10.83□□□□□ -0.68
SF3B3-208ENST00000567250 NOSIPQ9Y314 301 aaKnown RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms