RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 MFSD8Q8NHS3 518 aa13.09□□□□□ -0.31
RNF40-209ENST00000566703 KCNK17Q96T54 332 aa13.09□□□□□ -0.31
RNF40-209ENST00000566703 KATNB1Q9BVA0 655 aa13.09□□□□□ -0.31
RNF40-209ENST00000566703 SDR39U1Q9NRG7 319 aaPredicted RBP13.09□□□□□ -0.31
RNF40-209ENST00000566703 SLC6A13Q9NSD5 602 aa13.09□□□□□ -0.31
RNF40-209ENST00000566703 CRNNQ9UBG3 495 aaPredicted RBP13.09□□□□□ -0.31
RNF40-209ENST00000566703 LPAR3Q9UBY5 353 aa13.09□□□□□ -0.31
RNF40-209ENST00000566703 FBXO9Q9UK97 447 aaPredicted RBP13.09□□□□□ -0.31
RNF40-209ENST00000566703 MOKQ9UQ07 419 aa13.09□□□□□ -0.31
RNF40-209ENST00000566703 ZNF443Q9Y2A4 671 aaPredicted RBP13.09□□□□□ -0.31
RNF40-209ENST00000566703 RTTNQ86VV8 2226 aa13.08□□□□□ -0.32
RNF40-209ENST00000566703 ARPC4-TTLL3A0A0A6YYG9 625 aa13.08□□□□□ -0.32
RNF40-209ENST00000566703 ZNF587BE7ETH6 402 aa13.08□□□□□ -0.32
RNF40-209ENST00000566703 ATP6V1G2-DDX39BF2Z307 99 aa13.08□□□□□ -0.32
RNF40-209ENST00000566703 PDE5AO76074 875 aa13.08□□□□□ -0.32
RNF40-209ENST00000566703 BCHEP06276 602 aa13.08□□□□□ -0.32
RNF40-209ENST00000566703 NCF2P19878 526 aaPredicted RBP13.08□□□□□ -0.32
RNF40-209ENST00000566703 THBS2P35442 1172 aa13.08□□□□□ -0.32
RNF40-209ENST00000566703 PDLIM4P50479 330 aa13.08□□□□□ -0.32
RNF40-209ENST00000566703 UBE2NP61088 152 aaKnown RBP13.08□□□□□ -0.32
RNF40-209ENST00000566703 LSM11P83369 360 aaKnown RBP eCLIP13.08□□□□□ -0.32
RNF40-209ENST00000566703 NXNQ6DKJ4 435 aa13.08□□□□□ -0.32
RNF40-209ENST00000566703 ANKRD42Q8N9B4 389 aa13.08□□□□□ -0.32
RNF40-209ENST00000566703 NANOS1Q8WY41 292 aaKnown RBP13.08□□□□□ -0.32
RNF40-209ENST00000566703 BCL2L2Q92843 193 aaPredicted RBP13.08□□□□□ -0.32
RNF40-209ENST00000566703 SLC38A2Q96QD8 506 aa13.08□□□□□ -0.32
RNF40-209ENST00000566703 KCNS3Q9BQ31 491 aa13.08□□□□□ -0.32
RNF40-209ENST00000566703 BCL2L10Q9HD36 194 aa13.08□□□□□ -0.32
RNF40-209ENST00000566703 MYOZ1Q9NP98 299 aaPredicted RBP13.08□□□□□ -0.32
RNF40-209ENST00000566703 ADPRHL2Q9NX46 363 aa13.08□□□□□ -0.32
RNF40-209ENST00000566703 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.08□□□□□ -0.32
RNF40-209ENST00000566703 CHST2Q9Y4C5 530 aa13.08□□□□□ -0.32
RNF40-209ENST00000566703 FKBP7Q9Y680 259 aa13.08□□□□□ -0.32
RNF40-209ENST00000566703 V9GYY5 206 aaPredicted RBP13.08□□□□□ -0.32
RNF40-209ENST00000566703 IGHV1-18A0A0C4DH31 117 aa13.07□□□□□ -0.32
RNF40-209ENST00000566703 TMEM120BA0PK00 339 aa13.07□□□□□ -0.32
RNF40-209ENST00000566703 TMEM229AB2RXF0 380 aa13.07□□□□□ -0.32
RNF40-209ENST00000566703 B9A039 149 aa13.07□□□□□ -0.32
RNF40-209ENST00000566703 RPL36A-HNRNPH2H7BZ11 118 aa13.07□□□□□ -0.32
RNF40-209ENST00000566703 KLF11O14901 512 aa13.07□□□□□ -0.32
RNF40-209ENST00000566703 FRS3O43559 492 aa13.07□□□□□ -0.32
RNF40-209ENST00000566703 AHSA1O95433 338 aa13.07□□□□□ -0.32
RNF40-209ENST00000566703 CRYAAP02489 173 aa13.07□□□□□ -0.32
RNF40-209ENST00000566703 BMP2P12643 396 aa13.07□□□□□ -0.32
RNF40-209ENST00000566703 CDH2P19022 906 aaPredicted RBP13.07□□□□□ -0.32
RNF40-209ENST00000566703 SERPINF1P36955 418 aa13.07□□□□□ -0.32
RNF40-209ENST00000566703 GZMKP49863 264 aa13.07□□□□□ -0.32
RNF40-209ENST00000566703 SELENOPP49908 381 aa13.07□□□□□ -0.32
RNF40-209ENST00000566703 SH3BGRP55822 239 aaPredicted RBP13.07□□□□□ -0.32
RNF40-209ENST00000566703 BNIP2Q12982 314 aa13.07□□□□□ -0.32
RNF40-209ENST00000566703 HIKESHIQ53FT3 197 aa13.07□□□□□ -0.32
RNF40-209ENST00000566703 ANKRD16Q6P6B7 361 aa13.07□□□□□ -0.32
RNF40-209ENST00000566703 EPHX4Q8IUS5 362 aa13.07□□□□□ -0.32
RNF40-209ENST00000566703 HTRA1Q92743 480 aa13.07□□□□□ -0.32
RNF40-209ENST00000566703 C3orf49Q96BT1 292 aa13.07□□□□□ -0.32
RNF40-209ENST00000566703 FBXO17Q96EF6 278 aa13.07□□□□□ -0.32
RNF40-209ENST00000566703 TMEM19Q96HH6 336 aa13.07□□□□□ -0.32
RNF40-209ENST00000566703 REPIN1Q9BWE0 567 aaKnown RBP13.07□□□□□ -0.32
RNF40-209ENST00000566703 BEX2Q9BXY8 128 aa13.07□□□□□ -0.32
RNF40-209ENST00000566703 RAD21L1Q9H4I0 556 aa13.07□□□□□ -0.32
RNF40-209ENST00000566703 MANSC1Q9H8J5 431 aa13.07□□□□□ -0.32
RNF40-209ENST00000566703 C12orf10Q9HB07 376 aa13.07□□□□□ -0.32
RNF40-209ENST00000566703 RCE1Q9Y256 329 aa13.07□□□□□ -0.32
RNF40-209ENST00000566703 ZANQ9Y493 2812 aa13.07□□□□□ -0.32
RNF40-209ENST00000566703 VSTM5A8MXK1 200 aa13.06□□□□□ -0.32
RNF40-209ENST00000566703 VWC2LB2RUY7 222 aa13.06□□□□□ -0.32
RNF40-209ENST00000566703 FTCDNL1E5RQL4 147 aa13.06□□□□□ -0.32
RNF40-209ENST00000566703 UBDO15205 165 aa13.06□□□□□ -0.32
RNF40-209ENST00000566703 OR2T1O43869 369 aa13.06□□□□□ -0.32
RNF40-209ENST00000566703 FZD7O75084 574 aa13.06□□□□□ -0.32
RNF40-209ENST00000566703 LGI1O95970 557 aa13.06□□□□□ -0.32
RNF40-209ENST00000566703 IGLV1-44P01699 117 aa13.06□□□□□ -0.32
RNF40-209ENST00000566703 IGHV4-31P0DP07 118 aa13.06□□□□□ -0.32
RNF40-209ENST00000566703 KITP10721 976 aa13.06□□□□□ -0.32
RNF40-209ENST00000566703 PRG2P13727 222 aa13.06□□□□□ -0.32
RNF40-209ENST00000566703 POLR2JP52435 117 aaKnown RBP13.06□□□□□ -0.32
RNF40-209ENST00000566703 SNRPD2P62316 118 aaKnown RBP13.06□□□□□ -0.32
RNF40-209ENST00000566703 EFNB3Q15768 340 aa13.06□□□□□ -0.32
RNF40-209ENST00000566703 ZNF311Q5JNZ3 666 aa13.06□□□□□ -0.32
RNF40-209ENST00000566703 NIPAL3Q6P499 406 aa13.06□□□□□ -0.32
RNF40-209ENST00000566703 C5orf46Q6UWT4 87 aa13.06□□□□□ -0.32
RNF40-209ENST00000566703 OR4F15Q8NGB8 312 aa13.06□□□□□ -0.32
RNF40-209ENST00000566703 CA10Q9NS85 328 aa13.06□□□□□ -0.32
RNF40-209ENST00000566703 DNHD1Q96M86 4753 aa13.06□□□□□ -0.32
RNF40-209ENST00000566703 LOC102725191A0A1B0GVB3 256 aa13.05□□□□□ -0.32
RNF40-209ENST00000566703 LOC390937A0A1W2PQ73 354 aa13.05□□□□□ -0.32
RNF40-209ENST00000566703 LMX1BO60663 402 aa13.05□□□□□ -0.32
RNF40-209ENST00000566703 UPK3AO75631 287 aa13.05□□□□□ -0.32
RNF40-209ENST00000566703 ZNF43P17038 809 aa13.05□□□□□ -0.32
RNF40-209ENST00000566703 NAAAQ02083 359 aa13.05□□□□□ -0.32
RNF40-209ENST00000566703 FADDQ13158 208 aa13.05□□□□□ -0.32
RNF40-209ENST00000566703 RGNQ15493 299 aa13.05□□□□□ -0.32
RNF40-209ENST00000566703 SLC9B1Q4ZJI4 515 aa13.05□□□□□ -0.32
RNF40-209ENST00000566703 C6orf89Q6UWU4 347 aa13.05□□□□□ -0.32
RNF40-209ENST00000566703 NET1Q7Z628 596 aaPredicted RBP13.05□□□□□ -0.32
RNF40-209ENST00000566703 SERPINA11Q86U17 422 aa13.05□□□□□ -0.32
RNF40-209ENST00000566703 PHC2Q8IXK0 858 aa13.05□□□□□ -0.32
RNF40-209ENST00000566703 CCDC36Q8IYA8 594 aa13.05□□□□□ -0.32
RNF40-209ENST00000566703 MIER2Q8N344 545 aa13.05□□□□□ -0.32
RNF40-209ENST00000566703 LSMEM1Q8N8F7 131 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms