RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 DHFR2Q86XF0 187 aa23.23■■□□□ 1.31
NME3-209ENST00000566600 OFCC1Q8IZS5 231 aa23.23■■□□□ 1.31
NME3-209ENST00000566600 SLC7A6OSQ96CW6 309 aaPredicted RBP23.23■■□□□ 1.31
NME3-209ENST00000566600 ASPNQ9BXN1 380 aa23.23■■□□□ 1.31
NME3-209ENST00000566600 KLHL4Q9C0H6 718 aa23.23■■□□□ 1.31
NME3-209ENST00000566600 C12orf49Q9H741 205 aa23.23■■□□□ 1.31
NME3-209ENST00000566600 GALNT8Q9NY28 637 aa23.23■■□□□ 1.31
NME3-209ENST00000566600 RAMP1O60894 148 aa23.22■■□□□ 1.31
NME3-209ENST00000566600 BGLAPP02818 100 aa23.22■■□□□ 1.31
NME3-209ENST00000566600 ITGA2P17301 1181 aa23.22■■□□□ 1.31
NME3-209ENST00000566600 GRPRP30550 384 aa23.22■■□□□ 1.31
NME3-209ENST00000566600 SORDQ00796 357 aa23.22■■□□□ 1.31
NME3-209ENST00000566600 ZNF474Q6S9Z5 364 aaPredicted RBP23.22■■□□□ 1.31
NME3-209ENST00000566600 H1FNTQ75WM6 255 aaPredicted RBP23.22■■□□□ 1.31
NME3-209ENST00000566600 NUFIP2Q7Z417 695 aaKnown RBP23.22■■□□□ 1.31
NME3-209ENST00000566600 SCAIQ8N9R8 606 aa23.22■■□□□ 1.31
NME3-209ENST00000566600 ADPRHL1Q8NDY3 354 aa23.22■■□□□ 1.31
NME3-209ENST00000566600 MCUR1Q96AQ8 359 aa23.22■■□□□ 1.31
NME3-209ENST00000566600 ASB9Q96DX5 294 aa23.22■■□□□ 1.31
NME3-209ENST00000566600 PARPBPQ9NWS1 579 aa23.22■■□□□ 1.31
NME3-209ENST00000566600 NOSIPQ9Y314 301 aaKnown RBP23.22■■□□□ 1.31
NME3-209ENST00000566600 IGF2P01344 180 aa23.21■■□□□ 1.31
NME3-209ENST00000566600 YAP1P46937 504 aaKnown RBP23.21■■□□□ 1.31
NME3-209ENST00000566600 P2RY4P51582 365 aa23.21■■□□□ 1.31
NME3-209ENST00000566600 TRAM2Q15035 370 aa23.21■■□□□ 1.31
NME3-209ENST00000566600 LCN8Q6JVE9 175 aa23.21■■□□□ 1.31
NME3-209ENST00000566600 GPAT4Q86UL3 456 aa23.21■■□□□ 1.31
NME3-209ENST00000566600 NKAIN4Q8IVV8 208 aa23.21■■□□□ 1.31
NME3-209ENST00000566600 DMRTC2Q8IXT2 367 aaPredicted RBP23.21■■□□□ 1.31
NME3-209ENST00000566600 FAM86B1Q8N7N1 296 aa23.21■■□□□ 1.31
NME3-209ENST00000566600 OR9K2Q8NGE7 335 aa23.21■■□□□ 1.31
NME3-209ENST00000566600 TMEM239Q8WW34 195 aa23.21■■□□□ 1.31
NME3-209ENST00000566600 ZNF775Q96BV0 537 aaPredicted RBP23.21■■□□□ 1.31
NME3-209ENST00000566600 HTR3EA5X5Y0 456 aa23.2■■□□□ 1.3
NME3-209ENST00000566600 M0R082 166 aa23.2■■□□□ 1.3
NME3-209ENST00000566600 HNRNPRO43390 633 aaKnown RBP23.2■■□□□ 1.3
NME3-209ENST00000566600 DNAJC8O75937 253 aaPredicted RBP23.2■■□□□ 1.3
NME3-209ENST00000566600 RHCEP18577 417 aa23.2■■□□□ 1.3
NME3-209ENST00000566600 PTNP21246 168 aa23.2■■□□□ 1.3
NME3-209ENST00000566600 CD79BP40259 229 aa23.2■■□□□ 1.3
NME3-209ENST00000566600 OR3A2P47893 321 aa23.2■■□□□ 1.3
NME3-209ENST00000566600 POU4F3Q15319 338 aa23.2■■□□□ 1.3
NME3-209ENST00000566600 TFAP2EQ6VUC0 442 aa23.2■■□□□ 1.3
NME3-209ENST00000566600 CYP2R1Q6VVX0 501 aa23.2■■□□□ 1.3
NME3-209ENST00000566600 ZNF100Q8IYN0 542 aa23.2■■□□□ 1.3
NME3-209ENST00000566600 ZNF417Q8TAU3 575 aa23.2■■□□□ 1.3
NME3-209ENST00000566600 TMEM255BQ8WV15 326 aa23.2■■□□□ 1.3
NME3-209ENST00000566600 CLPTM1LQ96KA5 538 aa23.2■■□□□ 1.3
NME3-209ENST00000566600 C7orf34Q96L11 122 aa23.2■■□□□ 1.3
NME3-209ENST00000566600 ZNF587Q96SQ5 575 aaPredicted RBP23.2■■□□□ 1.3
NME3-209ENST00000566600 ANKRD19PQ9H560 264 aa23.2■■□□□ 1.3
NME3-209ENST00000566600 MRPL39Q9NYK5 338 aaKnown RBP23.2■■□□□ 1.3
NME3-209ENST00000566600 MED31Q9Y3C7 131 aa23.2■■□□□ 1.3
NME3-209ENST00000566600 FLVCR1Q9Y5Y0 555 aa23.2■■□□□ 1.3
NME3-209ENST00000566600 V9GYQ6 96 aa23.2■■□□□ 1.3
NME3-209ENST00000566600 J3KTA2 159 aa23.19■■□□□ 1.3
NME3-209ENST00000566600 KPNA4O00629 521 aaPredicted RBP23.19■■□□□ 1.3
NME3-209ENST00000566600 FFAR1O14842 300 aa23.19■■□□□ 1.3
NME3-209ENST00000566600 MRPL33O75394 65 aaKnown RBP23.19■■□□□ 1.3
NME3-209ENST00000566600 MT-ND1P03886 318 aa23.19■■□□□ 1.3
NME3-209ENST00000566600 POU2F1P14859 743 aa23.19■■□□□ 1.3
NME3-209ENST00000566600 NQO1P15559 274 aaKnown RBP23.19■■□□□ 1.3
NME3-209ENST00000566600 TRAP1Q12931 704 aaKnown RBP23.19■■□□□ 1.3
NME3-209ENST00000566600 ZNF74Q16587 644 aa23.19■■□□□ 1.3
NME3-209ENST00000566600 TMEM45BQ96B21 275 aa23.19■■□□□ 1.3
NME3-209ENST00000566600 CCDC124Q96CT7 223 aaKnown RBP23.19■■□□□ 1.3
NME3-209ENST00000566600 LRGUKQ96M69 825 aa23.19■■□□□ 1.3
NME3-209ENST00000566600 MOGAT1Q96PD6 335 aa23.19■■□□□ 1.3
NME3-209ENST00000566600 TRIM15Q9C019 465 aa23.19■■□□□ 1.3
NME3-209ENST00000566600 FKRPQ9H9S5 495 aa23.19■■□□□ 1.3
NME3-209ENST00000566600 NANSQ9NR45 359 aa23.19■■□□□ 1.3
NME3-209ENST00000566600 NDUFAF4Q9P032 175 aa23.19■■□□□ 1.3
NME3-209ENST00000566600 LOC102725191A0A1B0GVB3 256 aa23.18■■□□□ 1.3
NME3-209ENST00000566600 CNOT4O95628 575 aaKnown RBP23.18■■□□□ 1.3
NME3-209ENST00000566600 SEMG1P04279 462 aa23.18■■□□□ 1.3
NME3-209ENST00000566600 ATP6V1B2P21281 511 aa23.18■■□□□ 1.3
NME3-209ENST00000566600 CBLP22681 906 aa23.18■■□□□ 1.3
NME3-209ENST00000566600 LTBQ06643 244 aa23.18■■□□□ 1.3
NME3-209ENST00000566600 PMS2P3Q13401 168 aa23.18■■□□□ 1.3
NME3-209ENST00000566600 EXOC3L2Q2M3D2 409 aa23.18■■□□□ 1.3
NME3-209ENST00000566600 APH1AQ96BI3 265 aa23.18■■□□□ 1.3
NME3-209ENST00000566600 OXGR1Q96P68 337 aa23.18■■□□□ 1.3
NME3-209ENST00000566600 RHCGQ9UBD6 479 aa23.18■■□□□ 1.3
NME3-209ENST00000566600 ZNF229Q9UJW7 825 aa23.18■■□□□ 1.3
NME3-209ENST00000566600 ADGRG4Q8IZF6 3080 aa23.18■■□□□ 1.3
NME3-209ENST00000566600 hCG_2039718K7EN88 272 aa23.17■■□□□ 1.3
NME3-209ENST00000566600 PRSS23O95084 383 aa23.17■■□□□ 1.3
NME3-209ENST00000566600 CH25HO95992 272 aa23.17■■□□□ 1.3
NME3-209ENST00000566600 HIST1H2ABP04908 130 aa23.17■■□□□ 1.3
NME3-209ENST00000566600 ZNF43P17038 809 aa23.17■■□□□ 1.3
NME3-209ENST00000566600 UGT2B15P54855 530 aa23.17■■□□□ 1.3
NME3-209ENST00000566600 VLDLRP98155 873 aa23.17■■□□□ 1.3
NME3-209ENST00000566600 MS4A2Q01362 244 aa23.17■■□□□ 1.3
NME3-209ENST00000566600 HIST2H2BCQ6DN03 193 aa23.17■■□□□ 1.3
NME3-209ENST00000566600 PGM2L1Q6PCE3 622 aa23.17■■□□□ 1.3
NME3-209ENST00000566600 CREB3L2Q70SY1 520 aa23.17■■□□□ 1.3
NME3-209ENST00000566600 HIST3H2AQ7L7L0 130 aa23.17■■□□□ 1.3
NME3-209ENST00000566600 TSEN54Q7Z6J9 526 aaKnown RBP23.17■■□□□ 1.3
NME3-209ENST00000566600 RNF113BQ8IZP6 322 aaKnown RBP23.17■■□□□ 1.3
NME3-209ENST00000566600 PIK3C3Q8NEB9 887 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms