RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 DENND4AQ7Z401 1863 aa1.03□□□□□ -2.25
SMG1-212ENST00000566328 PTPRBP23467 1997 aa1.03□□□□□ -2.25
SMG1-212ENST00000566328 CACNA1DQ01668 2161 aa1.03□□□□□ -2.25
SMG1-212ENST00000566328 CHD6Q8TD26 2715 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 MAP1AP78559 2803 aaPredicted RBP1.02□□□□□ -2.25
SMG1-212ENST00000566328 LRBAP50851 2863 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 DCHS2Q6V1P9 2916 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 SVEP1Q4LDE5 3571 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 NPIPA5A0A0B4J1W7 369 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 IGHV1OR15-9A0A0B4J2B8 117 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 FAM92AA1XBS5 289 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 A6NDX4 124 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 NPIPA5E9PKD4 350 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 H0Y626 953 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 H0YIG0 161 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 M0QYV0 167 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 SLC30A4O14863 429 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 ZFC3H1O60293 1989 aaKnown RBP1.02□□□□□ -2.25
SMG1-212ENST00000566328 EIF5BO60841 1220 aaKnown RBP1.02□□□□□ -2.25
SMG1-212ENST00000566328 RHOBTB1O94844 696 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 SMC2O95347 1197 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 C6orf47O95873 294 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 OLFM2O95897 454 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 CD160O95971 181 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 IL1BP01584 269 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 FCER2P06734 321 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 CTSLP07711 333 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 RETP07949 1114 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 NUDT17P0C025 328 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 CCDC175P0C221 793 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 EPB41P11171 864 aaKnown RBP1.02□□□□□ -2.25
SMG1-212ENST00000566328 RALAP11233 206 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 POLR2EP19388 210 aaKnown RBP1.02□□□□□ -2.25
SMG1-212ENST00000566328 CCNCP24863 283 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 CD1BP29016 333 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 EEF1DP29692 281 aaKnown RBP1.02□□□□□ -2.25
SMG1-212ENST00000566328 ACVR1BP36896 505 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 P2RY2P41231 377 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 CSKP41240 450 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 PSMD8P48556 350 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 CSNK1DP48730 415 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 FASNP49327 2511 aaKnown RBP1.02□□□□□ -2.25
SMG1-212ENST00000566328 ZNF41P51814 821 aaPredicted RBP1.02□□□□□ -2.25
SMG1-212ENST00000566328 DAOAP59103 153 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 POLR2FP61218 127 aaKnown RBP1.02□□□□□ -2.25
SMG1-212ENST00000566328 NUCB2P80303 420 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 OGDHQ02218 1023 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 OC90Q02509 493 aaPredicted RBP1.02□□□□□ -2.25
SMG1-212ENST00000566328 UBXN1Q04323 297 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 FOLH1Q04609 750 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 GFPT1Q06210 699 aaPredicted RBP1.02□□□□□ -2.25
SMG1-212ENST00000566328 INCA1Q0VD86 236 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 HSPA14Q0VDF9 509 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 ANK3Q12955 4377 aaKnown RBP1.02□□□□□ -2.25
SMG1-212ENST00000566328 ACACAQ13085 2346 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 ITPR1Q14643 2758 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 PDGFRLQ15198 375 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 CYTH1Q15438 398 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 CD226Q15762 336 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 ZIC1Q15915 447 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 HAGHQ16775 308 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 WSCD2Q2TBF2 565 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 PTPN20Q4JDL3 420 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 TCP11X2Q5H9J9 407 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 NKAIN2Q5VXU1 208 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 Q5W150 140 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 RWDD4Q6NW29 188 aaKnown RBP1.02□□□□□ -2.25
SMG1-212ENST00000566328 SCYL2Q6P3W7 929 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 ANKRD12Q6UB98 2062 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 GBP6Q6ZN66 633 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 Q6ZSR6 202 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 FRA10AC1Q70Z53 315 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 LPCAT2Q7L5N7 544 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 CCDC186Q7Z3E2 898 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 CNTRLQ7Z7A1 2325 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 SLFN11Q7Z7L1 901 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 TAC4Q86UU9 113 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 UNC93AQ86WB7 457 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 PPP1R27Q86WC6 154 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 CALHM3Q86XJ0 350 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 C9orf40Q8IXQ3 194 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 C12orf56Q8IXR9 622 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 DEFB106AQ8N104 65 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 CMYA5Q8N3K9 4069 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 SLC25A45Q8N413 288 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 NKAIN3Q8N8D7 197 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 ZNF615Q8N8J6 731 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 Q8N9W7 124 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 FBXL13Q8NEE6 735 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 OR2L8Q8NGY9 312 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 CCL4L1Q8NHW4 92 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 DQX1Q8TE96 717 aaKnown RBP1.02□□□□□ -2.25
SMG1-212ENST00000566328 RNF139Q8WU17 664 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 C2orf15Q8WU43 125 aaKnown RBP1.02□□□□□ -2.25
SMG1-212ENST00000566328 DEPDC1BQ8WUY9 529 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 RXFP2Q8WXD0 754 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 DNASE1L2Q92874 299 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 SYAP1Q96A49 352 aaPredicted RBP1.02□□□□□ -2.25
SMG1-212ENST00000566328 CELF6Q96J87 481 aaKnown RBP1.02□□□□□ -2.25
SMG1-212ENST00000566328 BMFQ96LC9 184 aa1.02□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms