RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 RANBP1P43487 201 aa11.35□□□□□ -0.59
SF3B3-206ENST00000565990 HMGA2P52926 109 aa11.35□□□□□ -0.59
SF3B3-206ENST00000565990 SUCLG1P53597 346 aaKnown RBP11.35□□□□□ -0.59
SF3B3-206ENST00000565990 TLE1Q04724 770 aa11.35□□□□□ -0.59
SF3B3-206ENST00000565990 SELENBP1Q13228 472 aa11.35□□□□□ -0.59
SF3B3-206ENST00000565990 DGUOKQ16854 277 aa11.35□□□□□ -0.59
SF3B3-206ENST00000565990 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.35□□□□□ -0.59
SF3B3-206ENST00000565990 GXYLT1Q4G148 440 aa11.35□□□□□ -0.59
SF3B3-206ENST00000565990 ALG10BQ5I7T1 473 aa11.35□□□□□ -0.59
SF3B3-206ENST00000565990 EMC4Q5J8M3 183 aa11.35□□□□□ -0.59
SF3B3-206ENST00000565990 DCST1Q5T197 706 aa11.35□□□□□ -0.59
SF3B3-206ENST00000565990 GDF7Q7Z4P5 450 aa11.35□□□□□ -0.59
SF3B3-206ENST00000565990 ZNF605Q86T29 641 aa11.35□□□□□ -0.59
SF3B3-206ENST00000565990 GALNT11Q8NCW6 608 aa11.35□□□□□ -0.59
SF3B3-206ENST00000565990 FAM57AQ8TBR7 257 aa11.35□□□□□ -0.59
SF3B3-206ENST00000565990 ZPLD1Q8TCW7 415 aa11.35□□□□□ -0.59
SF3B3-206ENST00000565990 SLC25A43Q8WUT9 341 aaPredicted RBP11.35□□□□□ -0.59
SF3B3-206ENST00000565990 RORBQ92753 470 aa11.35□□□□□ -0.59
SF3B3-206ENST00000565990 ADGRG7Q96K78 797 aa11.35□□□□□ -0.59
SF3B3-206ENST00000565990 DCUN1D5Q9BTE7 237 aa11.35□□□□□ -0.59
SF3B3-206ENST00000565990 GABARAPL3Q9BY60 117 aa11.35□□□□□ -0.59
SF3B3-206ENST00000565990 EXO5Q9H790 373 aa11.35□□□□□ -0.59
SF3B3-206ENST00000565990 REEP1Q9H902 201 aa11.35□□□□□ -0.59
SF3B3-206ENST00000565990 CHRNA9Q9UGM1 479 aa11.35□□□□□ -0.59
SF3B3-206ENST00000565990 RALYQ9UKM9 306 aaKnown RBP11.35□□□□□ -0.59
SF3B3-206ENST00000565990 ARHGAP21Q5T5U3 1957 aa11.35□□□□□ -0.59
SF3B3-206ENST00000565990 KIAA1549Q9HCM3 1950 aa11.34□□□□□ -0.59
SF3B3-206ENST00000565990 A0A0J9YW62 118 aa11.34□□□□□ -0.59
SF3B3-206ENST00000565990 TMEM72A0PK05 275 aa11.34□□□□□ -0.59
SF3B3-206ENST00000565990 CPSF4LA6NMK7 179 aaKnown RBP11.34□□□□□ -0.59
SF3B3-206ENST00000565990 A8MVM7 634 aa11.34□□□□□ -0.59
SF3B3-206ENST00000565990 CLDN25C9JDP6 229 aa11.34□□□□□ -0.59
SF3B3-206ENST00000565990 J3KTA2 159 aa11.34□□□□□ -0.59
SF3B3-206ENST00000565990 CHP2O43745 196 aa11.34□□□□□ -0.59
SF3B3-206ENST00000565990 HTR1AP08908 422 aa11.34□□□□□ -0.59
SF3B3-206ENST00000565990 FUT4P22083 530 aa11.34□□□□□ -0.59
SF3B3-206ENST00000565990 CXCR1P25024 350 aa11.34□□□□□ -0.59
SF3B3-206ENST00000565990 TUBA1BP68363 451 aa11.34□□□□□ -0.59
SF3B3-206ENST00000565990 EGR4Q05215 589 aa11.34□□□□□ -0.59
SF3B3-206ENST00000565990 C19orf57Q0VDD7 668 aa11.34□□□□□ -0.59
SF3B3-206ENST00000565990 ST3GAL3Q11203 375 aa11.34□□□□□ -0.59
SF3B3-206ENST00000565990 TMED1Q13445 227 aa11.34□□□□□ -0.59
SF3B3-206ENST00000565990 CTU2Q2VPK5 515 aaKnown RBP11.34□□□□□ -0.59
SF3B3-206ENST00000565990 C16orf87Q6PH81 154 aa11.34□□□□□ -0.59
SF3B3-206ENST00000565990 GFRALQ6UXV0 394 aa11.34□□□□□ -0.59
SF3B3-206ENST00000565990 DEF8Q6ZN54 512 aa11.34□□□□□ -0.59
SF3B3-206ENST00000565990 ESPNLQ6ZVH7 1005 aa11.34□□□□□ -0.59
SF3B3-206ENST00000565990 TUBA1AQ71U36 451 aa11.34□□□□□ -0.59
SF3B3-206ENST00000565990 ADGRE4PQ86SQ3 457 aa11.34□□□□□ -0.59
SF3B3-206ENST00000565990 PM20D2Q8IYS1 436 aa11.34□□□□□ -0.59
SF3B3-206ENST00000565990 STK35Q8TDR2 534 aa11.34□□□□□ -0.59
SF3B3-206ENST00000565990 YIPF6Q96EC8 236 aa11.34□□□□□ -0.59
SF3B3-206ENST00000565990 SLC41A3Q96GZ6 507 aa11.34□□□□□ -0.59
SF3B3-206ENST00000565990 DHRS1Q96LJ7 313 aa11.34□□□□□ -0.59
SF3B3-206ENST00000565990 PRRC1Q96M27 445 aa11.34□□□□□ -0.59
SF3B3-206ENST00000565990 SIGLEC11Q96RL6 698 aa11.34□□□□□ -0.59
SF3B3-206ENST00000565990 UCN2Q96RP3 112 aa11.34□□□□□ -0.59
SF3B3-206ENST00000565990 PIP5K1AQ99755 562 aa11.34□□□□□ -0.59
SF3B3-206ENST00000565990 TMEM43Q9BTV4 400 aa11.34□□□□□ -0.59
SF3B3-206ENST00000565990 FUNDC2Q9BWH2 189 aa11.34□□□□□ -0.59
SF3B3-206ENST00000565990 MAN2C1Q9NTJ4 1040 aa11.34□□□□□ -0.59
SF3B3-206ENST00000565990 PAK1IP1Q9NWT1 392 aaPredicted RBP11.34□□□□□ -0.59
SF3B3-206ENST00000565990 RPS6KB2Q9UBS0 482 aa11.34□□□□□ -0.59
SF3B3-206ENST00000565990 ERGIC3Q9Y282 383 aa11.34□□□□□ -0.59
SF3B3-206ENST00000565990 TRAPPC4Q9Y296 219 aa11.34□□□□□ -0.59
SF3B3-206ENST00000565990 GMPPBQ9Y5P6 360 aa11.34□□□□□ -0.59
SF3B3-206ENST00000565990 PHF3Q92576 2039 aaKnown RBP11.34□□□□□ -0.59
SF3B3-206ENST00000565990 POLEQ07864 2286 aa11.34□□□□□ -0.59
SF3B3-206ENST00000565990 IGKV1D-42A0A075B6H8 117 aa11.33□□□□□ -0.6
SF3B3-206ENST00000565990 A0A1W2PRQ8 180 aa11.33□□□□□ -0.6
SF3B3-206ENST00000565990 ARRDC5A6NEK1 342 aa11.33□□□□□ -0.6
SF3B3-206ENST00000565990 GJE1A6NN92 205 aa11.33□□□□□ -0.6
SF3B3-206ENST00000565990 NPIPA2E9PIF3 369 aa11.33□□□□□ -0.6
SF3B3-206ENST00000565990 NPIPA3F8WFD2 350 aa11.33□□□□□ -0.6
SF3B3-206ENST00000565990 H3BML4 177 aa11.33□□□□□ -0.6
SF3B3-206ENST00000565990 hCG_2039718K7EN88 272 aa11.33□□□□□ -0.6
SF3B3-206ENST00000565990 ZNHIT1O43257 154 aa11.33□□□□□ -0.6
SF3B3-206ENST00000565990 RGS10O43665 173 aa11.33□□□□□ -0.6
SF3B3-206ENST00000565990 SULT1C4O75897 302 aa11.33□□□□□ -0.6
SF3B3-206ENST00000565990 IGF2P01344 180 aa11.33□□□□□ -0.6
SF3B3-206ENST00000565990 HOXD4P09016 255 aaPredicted RBP11.33□□□□□ -0.6
SF3B3-206ENST00000565990 IMPDH2P12268 514 aa11.33□□□□□ -0.6
SF3B3-206ENST00000565990 ANXA8P13928 327 aa11.33□□□□□ -0.6
SF3B3-206ENST00000565990 TCEA1P23193 301 aaKnown RBP11.33□□□□□ -0.6
SF3B3-206ENST00000565990 SHC1P29353 583 aa11.33□□□□□ -0.6
SF3B3-206ENST00000565990 UGT2B10P36537 528 aa11.33□□□□□ -0.6
SF3B3-206ENST00000565990 YAP1P46937 504 aaKnown RBP11.33□□□□□ -0.6
SF3B3-206ENST00000565990 BMXP51813 675 aa11.33□□□□□ -0.6
SF3B3-206ENST00000565990 CLDN20P56880 219 aa11.33□□□□□ -0.6
SF3B3-206ENST00000565990 TAS2R41P59536 307 aa11.33□□□□□ -0.6
SF3B3-206ENST00000565990 IL5RAQ01344 420 aa11.33□□□□□ -0.6
SF3B3-206ENST00000565990 RBPJQ06330 500 aa11.33□□□□□ -0.6
SF3B3-206ENST00000565990 DGCR6Q14129 220 aa11.33□□□□□ -0.6
SF3B3-206ENST00000565990 MAD2L1BPQ15013 274 aaPredicted RBP11.33□□□□□ -0.6
SF3B3-206ENST00000565990 RGS21Q2M5E4 152 aa11.33□□□□□ -0.6
SF3B3-206ENST00000565990 TMEM176BQ3YBM2 270 aaPredicted RBP11.33□□□□□ -0.6
SF3B3-206ENST00000565990 SYT14P1Q58G82 188 aa11.33□□□□□ -0.6
SF3B3-206ENST00000565990 UBE2UQ5VVX9 321 aa11.33□□□□□ -0.6
SF3B3-206ENST00000565990 LAIR2Q6ISS4 152 aa11.33□□□□□ -0.6
SF3B3-206ENST00000565990 C3orf33Q6P1S2 294 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms