RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 OR4D5Q8NGN0 318 aa2.41□□□□□ -2.02
PALB2-203ENST00000565038 DTX3LQ8TDB6 740 aa2.41□□□□□ -2.02
PALB2-203ENST00000565038 STARD8Q92502 1023 aa2.41□□□□□ -2.02
PALB2-203ENST00000565038 FOPNLQ96NB1 174 aa2.41□□□□□ -2.02
PALB2-203ENST00000565038 CLCF1Q9UBD9 225 aa2.41□□□□□ -2.02
PALB2-203ENST00000565038 SEC14L3Q9UDX4 400 aa2.41□□□□□ -2.02
PALB2-203ENST00000565038 PCSK1NQ9UHG2 260 aa2.41□□□□□ -2.02
PALB2-203ENST00000565038 LAMP5Q9UJQ1 280 aa2.41□□□□□ -2.02
PALB2-203ENST00000565038 MEMO1Q9Y316 297 aa2.41□□□□□ -2.02
PALB2-203ENST00000565038 RPL36Q9Y3U8 105 aaKnown RBP2.41□□□□□ -2.02
PALB2-203ENST00000565038 KIF3AQ9Y496 699 aa2.41□□□□□ -2.02
PALB2-203ENST00000565038 SLC25A15Q9Y619 301 aa2.41□□□□□ -2.02
PALB2-203ENST00000565038 DCAF1Q9Y4B6 1507 aa2.41□□□□□ -2.02
PALB2-203ENST00000565038 KIR2DL5BA0A0G2JN68 375 aa2.4□□□□□ -2.03
PALB2-203ENST00000565038 KIR2DL5BA0A0G2JPC4 375 aa2.4□□□□□ -2.03
PALB2-203ENST00000565038 SPRR5A0A1B0GTR4 108 aa2.4□□□□□ -2.03
PALB2-203ENST00000565038 SPAG7O75391 227 aa2.4□□□□□ -2.03
PALB2-203ENST00000565038 ADCY5O95622 1261 aa2.4□□□□□ -2.03
PALB2-203ENST00000565038 HMGB2P26583 209 aaKnown RBP2.4□□□□□ -2.03
PALB2-203ENST00000565038 RDXP35241 583 aaKnown RBP2.4□□□□□ -2.03
PALB2-203ENST00000565038 MAP3K8P41279 467 aa2.4□□□□□ -2.03
PALB2-203ENST00000565038 CD86P42081 329 aa2.4□□□□□ -2.03
PALB2-203ENST00000565038 GSSP48637 474 aa2.4□□□□□ -2.03
PALB2-203ENST00000565038 RGS4P49798 205 aa2.4□□□□□ -2.03
PALB2-203ENST00000565038 C1orf61Q13536 156 aa2.4□□□□□ -2.03
PALB2-203ENST00000565038 KIAA0087Q14695 138 aa2.4□□□□□ -2.03
PALB2-203ENST00000565038 TPD52L1Q16890 204 aaPredicted RBP2.4□□□□□ -2.03
PALB2-203ENST00000565038 MICBQ29980 383 aa2.4□□□□□ -2.03
PALB2-203ENST00000565038 RSPO1Q2MKA7 263 aaPredicted RBP2.4□□□□□ -2.03
PALB2-203ENST00000565038 CARD16Q5EG05 197 aa2.4□□□□□ -2.03
PALB2-203ENST00000565038 BEND3Q5T5X7 828 aa2.4□□□□□ -2.03
PALB2-203ENST00000565038 OR52E8Q6IFG1 317 aa2.4□□□□□ -2.03
PALB2-203ENST00000565038 HSDL2Q6YN16 418 aa2.4□□□□□ -2.03
PALB2-203ENST00000565038 PGAP1Q75T13 922 aa2.4□□□□□ -2.03
PALB2-203ENST00000565038 ABHD12BQ7Z5M8 362 aaPredicted RBP2.4□□□□□ -2.03
PALB2-203ENST00000565038 KIR2DL5AQ8N109 375 aa2.4□□□□□ -2.03
PALB2-203ENST00000565038 CCDC54Q8NEL0 328 aa2.4□□□□□ -2.03
PALB2-203ENST00000565038 SLC22A8Q8TCC7 542 aa2.4□□□□□ -2.03
PALB2-203ENST00000565038 ITCHQ96J02 903 aa2.4□□□□□ -2.03
PALB2-203ENST00000565038 SECISBP2Q96T21 854 aaKnown RBP2.4□□□□□ -2.03
PALB2-203ENST00000565038 TMEM246Q9BRR3 403 aa2.4□□□□□ -2.03
PALB2-203ENST00000565038 TUBGCP2Q9BSJ2 902 aa2.4□□□□□ -2.03
PALB2-203ENST00000565038 REEP4Q9H6H4 257 aa2.4□□□□□ -2.03
PALB2-203ENST00000565038 ZFP14Q9HCL3 533 aa2.4□□□□□ -2.03
PALB2-203ENST00000565038 RAB18Q9NP72 206 aa2.4□□□□□ -2.03
PALB2-203ENST00000565038 FARSBQ9NSD9 589 aaKnown RBP2.4□□□□□ -2.03
PALB2-203ENST00000565038 THUMPD1Q9NXG2 353 aaKnown RBP2.4□□□□□ -2.03
PALB2-203ENST00000565038 ZNFX1Q9P2E3 1918 aaKnown RBP2.4□□□□□ -2.03
PALB2-203ENST00000565038 NCAPD3P42695 1498 aa2.39□□□□□ -2.03
PALB2-203ENST00000565038 ATAD2BQ9ULI0 1458 aa2.39□□□□□ -2.03
PALB2-203ENST00000565038 SLIT3O75094 1523 aa2.39□□□□□ -2.03
PALB2-203ENST00000565038 AIREO43918 545 aa2.39□□□□□ -2.03
PALB2-203ENST00000565038 SMPD2O60906 423 aa2.39□□□□□ -2.03
PALB2-203ENST00000565038 SUPT3HO75486 399 aa2.39□□□□□ -2.03
PALB2-203ENST00000565038 PNMTP11086 282 aa2.39□□□□□ -2.03
PALB2-203ENST00000565038 POU2F1P14859 743 aa2.39□□□□□ -2.03
PALB2-203ENST00000565038 HNRNPA2B1P22626 353 aaKnown RBP2.39□□□□□ -2.03
PALB2-203ENST00000565038 CHI3L1P36222 383 aaPredicted RBP2.39□□□□□ -2.03
PALB2-203ENST00000565038 SLC26A3P40879 764 aa2.39□□□□□ -2.03
PALB2-203ENST00000565038 CXCL5P42830 114 aa2.39□□□□□ -2.03
PALB2-203ENST00000565038 MNAT1P51948 309 aa2.39□□□□□ -2.03
PALB2-203ENST00000565038 RFX4Q33E94 735 aa2.39□□□□□ -2.03
PALB2-203ENST00000565038 SLC36A3Q495N2 470 aa2.39□□□□□ -2.03
PALB2-203ENST00000565038 LINC00483Q53H64 154 aa2.39□□□□□ -2.03
PALB2-203ENST00000565038 HSP90AA5PQ58FG0 334 aa2.39□□□□□ -2.03
PALB2-203ENST00000565038 CCDC80Q76M96 950 aa2.39□□□□□ -2.03
PALB2-203ENST00000565038 CAMK2N1Q7Z7J9 78 aa2.39□□□□□ -2.03
PALB2-203ENST00000565038 ZDHHC21Q8IVQ6 265 aa2.39□□□□□ -2.03
PALB2-203ENST00000565038 ZNF695Q8IW36 515 aa2.39□□□□□ -2.03
PALB2-203ENST00000565038 SYT14Q8NB59 555 aa2.39□□□□□ -2.03
PALB2-203ENST00000565038 OR4F15Q8NGB8 312 aa2.39□□□□□ -2.03
PALB2-203ENST00000565038 OR10G2Q8NGC3 310 aa2.39□□□□□ -2.03
PALB2-203ENST00000565038 RNF2Q99496 336 aa2.39□□□□□ -2.03
PALB2-203ENST00000565038 TPPP3Q9BW30 176 aa2.39□□□□□ -2.03
PALB2-203ENST00000565038 GPR61Q9BZJ8 451 aa2.39□□□□□ -2.03
PALB2-203ENST00000565038 DEFB127Q9H1M4 99 aa2.39□□□□□ -2.03
PALB2-203ENST00000565038 SRMSQ9H3Y6 488 aa2.39□□□□□ -2.03
PALB2-203ENST00000565038 RPH3ALQ9UNE2 315 aa2.39□□□□□ -2.03
PALB2-203ENST00000565038 F5H6K3 240 aa2.38□□□□□ -2.03
PALB2-203ENST00000565038 LOC110117498-PIK3R3F6TDL0 507 aa2.38□□□□□ -2.03
PALB2-203ENST00000565038 K7EPI3 171 aa2.38□□□□□ -2.03
PALB2-203ENST00000565038 FOXH1O75593 365 aa2.38□□□□□ -2.03
PALB2-203ENST00000565038 B3GALNT1O75752 331 aa2.38□□□□□ -2.03
PALB2-203ENST00000565038 AP2A1O95782 977 aa2.38□□□□□ -2.03
PALB2-203ENST00000565038 LAP3P28838 519 aa2.38□□□□□ -2.03
PALB2-203ENST00000565038 TFPI2P48307 235 aa2.38□□□□□ -2.03
PALB2-203ENST00000565038 ZNF136P52737 540 aa2.38□□□□□ -2.03
PALB2-203ENST00000565038 POLR2FP61218 127 aaKnown RBP2.38□□□□□ -2.03
PALB2-203ENST00000565038 KLRC3Q07444 240 aa2.38□□□□□ -2.03
PALB2-203ENST00000565038 SNTB2Q13425 540 aaKnown RBP2.38□□□□□ -2.03
PALB2-203ENST00000565038 MOBPQ13875 183 aa2.38□□□□□ -2.03
PALB2-203ENST00000565038 CYTH1Q15438 398 aa2.38□□□□□ -2.03
PALB2-203ENST00000565038 SHHQ15465 462 aa2.38□□□□□ -2.03
PALB2-203ENST00000565038 TMEM183BQ1AE95 376 aa2.38□□□□□ -2.03
PALB2-203ENST00000565038 RIPPLY2Q5TAB7 128 aa2.38□□□□□ -2.03
PALB2-203ENST00000565038 FAM71E1Q6IPT2 247 aa2.38□□□□□ -2.03
PALB2-203ENST00000565038 C12orf56Q8IXR9 622 aa2.38□□□□□ -2.03
PALB2-203ENST00000565038 TMEM183AQ8IXX5 376 aa2.38□□□□□ -2.03
PALB2-203ENST00000565038 TMEM123Q8N131 208 aa2.38□□□□□ -2.03
PALB2-203ENST00000565038 CYB561D1Q8N8Q1 229 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms