RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 CASP12Q6UXS9 341 aa16.24■□□□□ 0.19
CLN6-204ENST00000564752 CXXC5Q7LFL8 322 aaKnown RBP16.24■□□□□ 0.19
CLN6-204ENST00000564752 PIAS4Q8N2W9 510 aaPredicted RBP16.24■□□□□ 0.19
CLN6-204ENST00000564752 C3orf49Q96BT1 292 aa16.24■□□□□ 0.19
CLN6-204ENST00000564752 DHRS9Q9BPW9 319 aa16.24■□□□□ 0.19
CLN6-204ENST00000564752 TAPBPLQ9BX59 468 aa16.24■□□□□ 0.19
CLN6-204ENST00000564752 TMEM38AQ9H6F2 299 aa16.24■□□□□ 0.19
CLN6-204ENST00000564752 SLC9A8Q9Y2E8 581 aa16.24■□□□□ 0.19
CLN6-204ENST00000564752 ALPK2Q86TB3 2170 aa16.23■□□□□ 0.19
CLN6-204ENST00000564752 CHD3Q12873 2000 aaKnown RBP16.23■□□□□ 0.19
CLN6-204ENST00000564752 A0A1W2PR80 420 aa16.23■□□□□ 0.19
CLN6-204ENST00000564752 LIPT2A6NK58 231 aa16.23■□□□□ 0.19
CLN6-204ENST00000564752 TP53P04637 393 aaPredicted RBP16.23■□□□□ 0.19
CLN6-204ENST00000564752 ITGA5P08648 1049 aa16.23■□□□□ 0.19
CLN6-204ENST00000564752 TROVE2P10155 538 aaKnown RBP eCLIP16.23■□□□□ 0.19
CLN6-204ENST00000564752 SLC6A2P23975 617 aa16.23■□□□□ 0.19
CLN6-204ENST00000564752 CD40P25942 277 aa16.23■□□□□ 0.19
CLN6-204ENST00000564752 TTKP33981 857 aa16.23■□□□□ 0.19
CLN6-204ENST00000564752 ZNF83P51522 516 aa16.23■□□□□ 0.19
CLN6-204ENST00000564752 HOXC5Q00444 222 aa16.23■□□□□ 0.19
CLN6-204ENST00000564752 NRF1Q16656 503 aa16.23■□□□□ 0.19
CLN6-204ENST00000564752 C11orf71Q6IPW1 123 aa16.23■□□□□ 0.19
CLN6-204ENST00000564752 SLC22A25Q6T423 547 aa16.23■□□□□ 0.19
CLN6-204ENST00000564752 DLEU7Q6UYE1 221 aa16.23■□□□□ 0.19
CLN6-204ENST00000564752 OR52E4Q8NGH9 312 aa16.23■□□□□ 0.19
CLN6-204ENST00000564752 TMEM120AQ9BXJ8 343 aa16.23■□□□□ 0.19
CLN6-204ENST00000564752 PARPBPQ9NWS1 579 aa16.23■□□□□ 0.19
CLN6-204ENST00000564752 RPS6KB2Q9UBS0 482 aa16.23■□□□□ 0.19
CLN6-204ENST00000564752 ANGPT4Q9Y264 503 aa16.23■□□□□ 0.19
CLN6-204ENST00000564752 FLVCR1Q9Y5Y0 555 aa16.23■□□□□ 0.19
CLN6-204ENST00000564752 PRORSD1PA6NEY8 169 aa16.22■□□□□ 0.19
CLN6-204ENST00000564752 TLX2O43763 284 aaPredicted RBP16.22■□□□□ 0.19
CLN6-204ENST00000564752 CD5LO43866 347 aa16.22■□□□□ 0.19
CLN6-204ENST00000564752 SSX4O60224 188 aa16.22■□□□□ 0.19
CLN6-204ENST00000564752 AKR7A3O95154 331 aa16.22■□□□□ 0.19
CLN6-204ENST00000564752 AQP1P29972 269 aa16.22■□□□□ 0.19
CLN6-204ENST00000564752 NCALDP61601 193 aa16.22■□□□□ 0.19
CLN6-204ENST00000564752 SPOCK1Q08629 439 aa16.22■□□□□ 0.19
CLN6-204ENST00000564752 NFYCQ13952 458 aa16.22■□□□□ 0.19
CLN6-204ENST00000564752 SLC17A1Q14916 467 aa16.22■□□□□ 0.19
CLN6-204ENST00000564752 CYP51A1Q16850 503 aa16.22■□□□□ 0.19
CLN6-204ENST00000564752 RUNDC3AQ59EK9 446 aa16.22■□□□□ 0.19
CLN6-204ENST00000564752 C1orf140Q5VVS0 124 aa16.22■□□□□ 0.19
CLN6-204ENST00000564752 METTL21CQ5VZV1 264 aa16.22■□□□□ 0.19
CLN6-204ENST00000564752 DHRS4L2Q6PKH6 230 aa16.22■□□□□ 0.19
CLN6-204ENST00000564752 DPP10Q8N608 796 aa16.22■□□□□ 0.19
CLN6-204ENST00000564752 WDR31Q8NA23 367 aa16.22■□□□□ 0.19
CLN6-204ENST00000564752 HIPK4Q8NE63 616 aa16.22■□□□□ 0.19
CLN6-204ENST00000564752 SPATA3Q8NHX4 192 aa16.22■□□□□ 0.19
CLN6-204ENST00000564752 TSPEARQ8WU66 669 aa16.22■□□□□ 0.19
CLN6-204ENST00000564752 ADAD1Q96M93 576 aaKnown RBP16.22■□□□□ 0.19
CLN6-204ENST00000564752 ZNF607Q96SK3 696 aa16.22■□□□□ 0.19
CLN6-204ENST00000564752 CGREF1Q99674 301 aa16.22■□□□□ 0.19
CLN6-204ENST00000564752 RHNO1Q9BSD3 238 aa16.22■□□□□ 0.19
CLN6-204ENST00000564752 CACNG6Q9BXT2 260 aa16.22■□□□□ 0.19
CLN6-204ENST00000564752 AMBRA1Q9C0C7 1298 aa16.22■□□□□ 0.19
CLN6-204ENST00000564752 CBLN4Q9NTU7 201 aa16.22■□□□□ 0.19
CLN6-204ENST00000564752 ZNF446Q9NWS9 450 aa16.22■□□□□ 0.19
CLN6-204ENST00000564752 ADPRHL2Q9NX46 363 aa16.22■□□□□ 0.19
CLN6-204ENST00000564752 SLC13A4Q9UKG4 626 aa16.22■□□□□ 0.19
CLN6-204ENST00000564752 PLCE1Q9P212 2302 aa16.22■□□□□ 0.19
CLN6-204ENST00000564752 CUBNO60494 3623 aa16.21■□□□□ 0.19
CLN6-204ENST00000564752 ELOA3DA6NLF2 546 aaPredicted RBP16.21■□□□□ 0.19
CLN6-204ENST00000564752 TMEM229AB2RXF0 380 aa16.21■□□□□ 0.19
CLN6-204ENST00000564752 AHSA1O95433 338 aa16.21■□□□□ 0.19
CLN6-204ENST00000564752 MTPNP58546 118 aa16.21■□□□□ 0.19
CLN6-204ENST00000564752 ELOA3BQ3SY89 546 aa16.21■□□□□ 0.19
CLN6-204ENST00000564752 RETREG3Q86VR2 466 aa16.21■□□□□ 0.19
CLN6-204ENST00000564752 DEPDC4Q8N2C3 294 aa16.21■□□□□ 0.19
CLN6-204ENST00000564752 MUC15Q8N387 334 aa16.21■□□□□ 0.19
CLN6-204ENST00000564752 TMEM99Q8N816 258 aa16.21■□□□□ 0.19
CLN6-204ENST00000564752 C11orf65Q8NCR3 313 aa16.21■□□□□ 0.19
CLN6-204ENST00000564752 ELOA3Q8NG57 546 aa16.21■□□□□ 0.19
CLN6-204ENST00000564752 OR10H5Q8NGA6 315 aa16.21■□□□□ 0.19
CLN6-204ENST00000564752 STK35Q8TDR2 534 aa16.21■□□□□ 0.19
CLN6-204ENST00000564752 ANKRD27Q96NW4 1050 aa16.21■□□□□ 0.19
CLN6-204ENST00000564752 C1QTNF6Q9BXI9 259 aa16.21■□□□□ 0.19
CLN6-204ENST00000564752 SLC7A10Q9NS82 523 aa16.21■□□□□ 0.19
CLN6-204ENST00000564752 FGFR1OP2Q9NVK5 253 aa16.21■□□□□ 0.19
CLN6-204ENST00000564752 UPB1Q9UBR1 384 aa16.21■□□□□ 0.19
CLN6-204ENST00000564752 POU2F3Q9UKI9 436 aa16.21■□□□□ 0.19
CLN6-204ENST00000564752 AQP7P3A6NL99 342 aa16.2■□□□□ 0.18
CLN6-204ENST00000564752 M0R1B8 84 aa16.2■□□□□ 0.18
CLN6-204ENST00000564752 SERPINB7O75635 380 aa16.2■□□□□ 0.18
CLN6-204ENST00000564752 FABP6P51161 128 aa16.2■□□□□ 0.18
CLN6-204ENST00000564752 ADRM1Q16186 407 aa16.2■□□□□ 0.18
CLN6-204ENST00000564752 HSP90B2PQ58FF3 399 aa16.2■□□□□ 0.18
CLN6-204ENST00000564752 TSPO2Q5TGU0 170 aa16.2■□□□□ 0.18
CLN6-204ENST00000564752 B3GLCTQ6Y288 498 aa16.2■□□□□ 0.18
CLN6-204ENST00000564752 GPAT4Q86UL3 456 aa16.2■□□□□ 0.18
CLN6-204ENST00000564752 COMTD1Q86VU5 262 aa16.2■□□□□ 0.18
CLN6-204ENST00000564752 FBXL14Q8N1E6 418 aa16.2■□□□□ 0.18
CLN6-204ENST00000564752 C17orf78Q8N4C9 275 aa16.2■□□□□ 0.18
CLN6-204ENST00000564752 C1orf162Q8NEQ5 155 aaPredicted RBP16.2■□□□□ 0.18
CLN6-204ENST00000564752 BHLHE22Q8NFJ8 381 aaPredicted RBP16.2■□□□□ 0.18
CLN6-204ENST00000564752 OR9K2Q8NGE7 335 aa16.2■□□□□ 0.18
CLN6-204ENST00000564752 SF3B5Q9BWJ5 86 aaKnown RBP16.2■□□□□ 0.18
CLN6-204ENST00000564752 SLC17A5Q9NRA2 495 aa16.2■□□□□ 0.18
CLN6-204ENST00000564752 YAE1D1Q9NRH1 226 aa16.2■□□□□ 0.18
CLN6-204ENST00000564752 MRGBPQ9NV56 204 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms