RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 C9orf66Q5T8R8 295 aa3.16□□□□□ -1.9
CHD9-212ENST00000564641 LIN9Q5TKA1 542 aa3.16□□□□□ -1.9
CHD9-212ENST00000564641 UBE2UQ5VVX9 321 aa3.16□□□□□ -1.9
CHD9-212ENST00000564641 TTC33Q6PID6 262 aaPredicted RBP3.16□□□□□ -1.9
CHD9-212ENST00000564641 MFSD7Q6UXD7 560 aa3.16□□□□□ -1.9
CHD9-212ENST00000564641 SLC22A16Q86VW1 577 aa3.16□□□□□ -1.9
CHD9-212ENST00000564641 HORMAD1Q86X24 394 aa3.16□□□□□ -1.9
CHD9-212ENST00000564641 NUDCD3Q8IVD9 361 aa3.16□□□□□ -1.9
CHD9-212ENST00000564641 ZCCHC7Q8N3Z6 543 aaKnown RBP3.16□□□□□ -1.9
CHD9-212ENST00000564641 SNX31Q8N9S9 440 aa3.16□□□□□ -1.9
CHD9-212ENST00000564641 VN1R2Q8NFZ6 395 aa3.16□□□□□ -1.9
CHD9-212ENST00000564641 OR52E1Q8NGJ3 308 aa3.16□□□□□ -1.9
CHD9-212ENST00000564641 TCP10LQ8TDR4 215 aa3.16□□□□□ -1.9
CHD9-212ENST00000564641 SAP25Q8TEE9 199 aa3.16□□□□□ -1.9
CHD9-212ENST00000564641 GGHQ92820 318 aa3.16□□□□□ -1.9
CHD9-212ENST00000564641 C11orf52Q96A22 123 aa3.16□□□□□ -1.9
CHD9-212ENST00000564641 NRBF2Q96F24 287 aa3.16□□□□□ -1.9
CHD9-212ENST00000564641 SH3YL1Q96HL8 342 aaPredicted RBP3.16□□□□□ -1.9
CHD9-212ENST00000564641 C9orf72Q96LT7 481 aa3.16□□□□□ -1.9
CHD9-212ENST00000564641 TSNARE1Q96NA8 513 aa3.16□□□□□ -1.9
CHD9-212ENST00000564641 DOK1Q99704 481 aa3.16□□□□□ -1.9
CHD9-212ENST00000564641 CHID1Q9BWS9 393 aa3.16□□□□□ -1.9
CHD9-212ENST00000564641 YTHDF1Q9BYJ9 559 aaKnown RBP3.16□□□□□ -1.9
CHD9-212ENST00000564641 RAB34Q9BZG1 259 aa3.16□□□□□ -1.9
CHD9-212ENST00000564641 TRIM9Q9C026 710 aa3.16□□□□□ -1.9
CHD9-212ENST00000564641 GANQ9H2C0 597 aa3.16□□□□□ -1.9
CHD9-212ENST00000564641 FAM96AQ9H5X1 160 aa3.16□□□□□ -1.9
CHD9-212ENST00000564641 NANOGQ9H9S0 305 aa3.16□□□□□ -1.9
CHD9-212ENST00000564641 RPRD1BQ9NQG5 326 aaKnown RBP3.16□□□□□ -1.9
CHD9-212ENST00000564641 ZC4H2Q9NQZ6 224 aa3.16□□□□□ -1.9
CHD9-212ENST00000564641 PHPT1Q9NRX4 125 aaPredicted RBP3.16□□□□□ -1.9
CHD9-212ENST00000564641 CLEC5AQ9NY25 188 aa3.16□□□□□ -1.9
CHD9-212ENST00000564641 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.16□□□□□ -1.9
CHD9-212ENST00000564641 KLK11Q9UBX7 282 aa3.16□□□□□ -1.9
CHD9-212ENST00000564641 ZNF221Q9UK13 617 aa3.16□□□□□ -1.9
CHD9-212ENST00000564641 FBXL4Q9UKA2 621 aa3.16□□□□□ -1.9
CHD9-212ENST00000564641 PSME2Q9UL46 239 aa3.16□□□□□ -1.9
CHD9-212ENST00000564641 DUSP12Q9UNI6 340 aa3.16□□□□□ -1.9
CHD9-212ENST00000564641 PLCL2Q9UPR0 1127 aa3.16□□□□□ -1.9
CHD9-212ENST00000564641 AP3M1Q9Y2T2 418 aa3.16□□□□□ -1.9
CHD9-212ENST00000564641 RNF11Q9Y3C5 154 aa3.16□□□□□ -1.9
CHD9-212ENST00000564641 MRPS18CQ9Y3D5 142 aaKnown RBP3.16□□□□□ -1.9
CHD9-212ENST00000564641 STRAPQ9Y3F4 350 aaKnown RBP3.16□□□□□ -1.9
CHD9-212ENST00000564641 AUP1Q9Y679 476 aa3.16□□□□□ -1.9
CHD9-212ENST00000564641 EP300Q09472 2414 aaPredicted RBP3.16□□□□□ -1.9
CHD9-212ENST00000564641 TPRP12270 2363 aaKnown RBP3.16□□□□□ -1.9
CHD9-212ENST00000564641 KIAA1671Q9BY89 1806 aa3.15□□□□□ -1.91
CHD9-212ENST00000564641 USP34Q70CQ2 3546 aa3.15□□□□□ -1.91
CHD9-212ENST00000564641 MAGEB16A2A368 324 aa3.15□□□□□ -1.91
CHD9-212ENST00000564641 ISPDA4D126 451 aa3.15□□□□□ -1.91
CHD9-212ENST00000564641 MTMR11A4FU01 709 aa3.15□□□□□ -1.91
CHD9-212ENST00000564641 TRPC5OSA6NMA1 111 aa3.15□□□□□ -1.91
CHD9-212ENST00000564641 MEI4A8MW99 385 aa3.15□□□□□ -1.91
CHD9-212ENST00000564641 hCG_2039718K7EN88 272 aa3.15□□□□□ -1.91
CHD9-212ENST00000564641 SLC28A1O00337 649 aa3.15□□□□□ -1.91
CHD9-212ENST00000564641 LAD1O00515 517 aa3.15□□□□□ -1.91
CHD9-212ENST00000564641 BET1O15155 118 aa3.15□□□□□ -1.91
CHD9-212ENST00000564641 RAD51BO15315 384 aa3.15□□□□□ -1.91
CHD9-212ENST00000564641 FAM189A1O60320 539 aa3.15□□□□□ -1.91
CHD9-212ENST00000564641 NOS1APO75052 506 aaPredicted RBP3.15□□□□□ -1.91
CHD9-212ENST00000564641 CLN5O75503 358 aa3.15□□□□□ -1.91
CHD9-212ENST00000564641 THY1P04216 161 aa3.15□□□□□ -1.91
CHD9-212ENST00000564641 IFNA16P05015 189 aa3.15□□□□□ -1.91
CHD9-212ENST00000564641 SERPINF2P08697 491 aa3.15□□□□□ -1.91
CHD9-212ENST00000564641 DBTP11182 482 aaKnown RBP3.15□□□□□ -1.91
CHD9-212ENST00000564641 IMPDH1P20839 514 aa3.15□□□□□ -1.91
CHD9-212ENST00000564641 HOXA9P31269 272 aa3.15□□□□□ -1.91
CHD9-212ENST00000564641 HPCAL1P37235 193 aa3.15□□□□□ -1.91
CHD9-212ENST00000564641 ELK3P41970 407 aa3.15□□□□□ -1.91
CHD9-212ENST00000564641 QARSP47897 775 aaKnown RBP3.15□□□□□ -1.91
CHD9-212ENST00000564641 HLCSP50747 726 aa3.15□□□□□ -1.91
CHD9-212ENST00000564641 NKX2-5P52952 324 aaPredicted RBP3.15□□□□□ -1.91
CHD9-212ENST00000564641 AQP5P55064 265 aa3.15□□□□□ -1.91
CHD9-212ENST00000564641 GMFBP60983 142 aa3.15□□□□□ -1.91
CHD9-212ENST00000564641 ACY1Q03154 408 aa3.15□□□□□ -1.91
CHD9-212ENST00000564641 GBE1Q04446 702 aa3.15□□□□□ -1.91
CHD9-212ENST00000564641 SCRN3Q0VDG4 424 aa3.15□□□□□ -1.91
CHD9-212ENST00000564641 PDIA2Q13087 525 aaKnown RBP3.15□□□□□ -1.91
CHD9-212ENST00000564641 NME3Q13232 169 aa3.15□□□□□ -1.91
CHD9-212ENST00000564641 NAB1Q13506 487 aa3.15□□□□□ -1.91
CHD9-212ENST00000564641 KRR1Q13601 381 aaKnown RBP3.15□□□□□ -1.91
CHD9-212ENST00000564641 MESDQ14696 234 aa3.15□□□□□ -1.91
CHD9-212ENST00000564641 RFTN1Q14699 578 aaPredicted RBP3.15□□□□□ -1.91
CHD9-212ENST00000564641 DUSP5Q16690 384 aa3.15□□□□□ -1.91
CHD9-212ENST00000564641 UBE2SQ16763 222 aa3.15□□□□□ -1.91
CHD9-212ENST00000564641 DGUOKQ16854 277 aa3.15□□□□□ -1.91
CHD9-212ENST00000564641 Q1RN00 199 aa3.15□□□□□ -1.91
CHD9-212ENST00000564641 ZNF528Q3MIS6 628 aa3.15□□□□□ -1.91
CHD9-212ENST00000564641 ZNF544Q6NX49 715 aa3.15□□□□□ -1.91
CHD9-212ENST00000564641 TMEM64Q6YI46 380 aa3.15□□□□□ -1.91
CHD9-212ENST00000564641 LINC00299Q6ZSB3 139 aa3.15□□□□□ -1.91
CHD9-212ENST00000564641 TMEM26Q6ZUK4 368 aa3.15□□□□□ -1.91
CHD9-212ENST00000564641 KRTAP5-2Q701N4 177 aa3.15□□□□□ -1.91
CHD9-212ENST00000564641 CPEB2Q7Z5Q1 589 aaKnown RBP3.15□□□□□ -1.91
CHD9-212ENST00000564641 ZBTB8OSQ8IWT0 167 aa3.15□□□□□ -1.91
CHD9-212ENST00000564641 DEFB107AQ8IZN7 70 aa3.15□□□□□ -1.91
CHD9-212ENST00000564641 ZNF786Q8N393 782 aa3.15□□□□□ -1.91
CHD9-212ENST00000564641 CD177Q8N6Q3 437 aa3.15□□□□□ -1.91
CHD9-212ENST00000564641 BANPQ8N9N5 519 aa3.15□□□□□ -1.91
CHD9-212ENST00000564641 OR4C15Q8NGM1 316 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms