RNA–Protein interactions for RNA: ENST00000564468.5

CLK3-216, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-216ENST00000564468 CD247P20963 164 aa11.84□□□□□ -0.51
CLK3-216ENST00000564468 DRD4P21917 467 aa11.84□□□□□ -0.51
CLK3-216ENST00000564468 PRDX6P30041 224 aa11.84□□□□□ -0.51
CLK3-216ENST00000564468 GNGT1P63211 74 aa11.84□□□□□ -0.51
CLK3-216ENST00000564468 TGFBR3Q03167 851 aa11.84□□□□□ -0.51
CLK3-216ENST00000564468 EGR4Q05215 589 aa11.84□□□□□ -0.51
CLK3-216ENST00000564468 KEAP1Q14145 624 aa11.84□□□□□ -0.51
CLK3-216ENST00000564468 OR7E24Q6IFN5 339 aa11.84□□□□□ -0.51
CLK3-216ENST00000564468 PAMR1Q6UXH9 720 aa11.84□□□□□ -0.51
CLK3-216ENST00000564468 HACD2Q6Y1H2 254 aa11.84□□□□□ -0.51
CLK3-216ENST00000564468 AAED1Q7RTV5 226 aa11.84□□□□□ -0.51
CLK3-216ENST00000564468 WFDC8Q8IUA0 241 aa11.84□□□□□ -0.51
CLK3-216ENST00000564468 MICU2Q8IYU8 434 aa11.84□□□□□ -0.51
CLK3-216ENST00000564468 POMGNT2Q8NAT1 580 aa11.84□□□□□ -0.51
CLK3-216ENST00000564468 GPR32P1Q8NGA4 272 aa11.84□□□□□ -0.51
CLK3-216ENST00000564468 OR6T1Q8NGN1 323 aa11.84□□□□□ -0.51
CLK3-216ENST00000564468 TAMM41Q96BW9 452 aa11.84□□□□□ -0.51
CLK3-216ENST00000564468 MUCL1Q96DR8 90 aa11.84□□□□□ -0.51
CLK3-216ENST00000564468 KTI12Q96EK9 354 aaPredicted RBP11.84□□□□□ -0.51
CLK3-216ENST00000564468 TMEM43Q9BTV4 400 aa11.84□□□□□ -0.51
CLK3-216ENST00000564468 TAS2R16Q9NYV7 291 aa11.84□□□□□ -0.51
CLK3-216ENST00000564468 MALT1Q9UDY8 824 aa11.84□□□□□ -0.51
CLK3-216ENST00000564468 B3GALT5Q9Y2C3 310 aa11.84□□□□□ -0.51
CLK3-216ENST00000564468 CORINQ9Y5Q5 1042 aa11.84□□□□□ -0.51
CLK3-216ENST00000564468 ARID1AO14497 2285 aa11.84□□□□□ -0.51
CLK3-216ENST00000564468 ALPK2Q86TB3 2170 aa11.84□□□□□ -0.51
CLK3-216ENST00000564468 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.83□□□□□ -0.52
CLK3-216ENST00000564468 TRAPPC13A5PLN9 417 aa11.83□□□□□ -0.52
CLK3-216ENST00000564468 CCT8L1PA6NM43 557 aa11.83□□□□□ -0.52
CLK3-216ENST00000564468 FTCDNL1E5RQL4 147 aa11.83□□□□□ -0.52
CLK3-216ENST00000564468 KLF4O43474 513 aa11.83□□□□□ -0.52
CLK3-216ENST00000564468 TPST2O60704 377 aa11.83□□□□□ -0.52
CLK3-216ENST00000564468 FZD7O75084 574 aa11.83□□□□□ -0.52
CLK3-216ENST00000564468 LYZL6O75951 148 aa11.83□□□□□ -0.52
CLK3-216ENST00000564468 CD99P14209 185 aa11.83□□□□□ -0.52
CLK3-216ENST00000564468 ZNF43P17038 809 aa11.83□□□□□ -0.52
CLK3-216ENST00000564468 GGT1P19440 569 aa11.83□□□□□ -0.52
CLK3-216ENST00000564468 IGHV1-2P23083 117 aa11.83□□□□□ -0.52
CLK3-216ENST00000564468 KDELR2P33947 212 aa11.83□□□□□ -0.52
CLK3-216ENST00000564468 ART1P52961 327 aa11.83□□□□□ -0.52
CLK3-216ENST00000564468 CDH12P55289 794 aa11.83□□□□□ -0.52
CLK3-216ENST00000564468 FAPQ12884 760 aa11.83□□□□□ -0.52
CLK3-216ENST00000564468 ENTPD8Q5MY95 495 aa11.83□□□□□ -0.52
CLK3-216ENST00000564468 TIMM23BQ5SRD1 257 aa11.83□□□□□ -0.52
CLK3-216ENST00000564468 C1QTNF12Q5T7M4 302 aa11.83□□□□□ -0.52
CLK3-216ENST00000564468 C22orf34Q6ZV56 151 aa11.83□□□□□ -0.52
CLK3-216ENST00000564468 H1FNTQ75WM6 255 aaPredicted RBP11.83□□□□□ -0.52
CLK3-216ENST00000564468 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.83□□□□□ -0.52
CLK3-216ENST00000564468 ZNF433Q8N7K0 673 aaPredicted RBP11.83□□□□□ -0.52
CLK3-216ENST00000564468 ADPRHL1Q8NDY3 354 aa11.83□□□□□ -0.52
CLK3-216ENST00000564468 VANGL1Q8TAA9 524 aaPredicted RBP11.83□□□□□ -0.52
CLK3-216ENST00000564468 LZICQ8WZA0 190 aa11.83□□□□□ -0.52
CLK3-216ENST00000564468 NRGNQ92686 78 aa11.83□□□□□ -0.52
CLK3-216ENST00000564468 TAAR8Q969N4 342 aa11.83□□□□□ -0.52
CLK3-216ENST00000564468 MPP4Q96JB8 637 aa11.83□□□□□ -0.52
CLK3-216ENST00000564468 OXGR1Q96P68 337 aa11.83□□□□□ -0.52
CLK3-216ENST00000564468 PTDSS2Q9BVG9 487 aa11.83□□□□□ -0.52
CLK3-216ENST00000564468 PRR14Q9BWN1 585 aa11.83□□□□□ -0.52
CLK3-216ENST00000564468 ASPNQ9BXN1 380 aa11.83□□□□□ -0.52
CLK3-216ENST00000564468 POLR2J2Q9GZM3 115 aaKnown RBP11.83□□□□□ -0.52
CLK3-216ENST00000564468 PCDHAC1Q9H158 963 aa11.83□□□□□ -0.52
CLK3-216ENST00000564468 POLR2J3Q9H1A7 115 aaKnown RBP11.83□□□□□ -0.52
CLK3-216ENST00000564468 MYLK2Q9H1R3 596 aa11.83□□□□□ -0.52
CLK3-216ENST00000564468 ESRP2Q9H6T0 727 aaKnown RBP11.83□□□□□ -0.52
CLK3-216ENST00000564468 IGKV1D-42A0A075B6H8 117 aa11.82□□□□□ -0.52
CLK3-216ENST00000564468 CPSF4LA6NMK7 179 aaKnown RBP11.82□□□□□ -0.52
CLK3-216ENST00000564468 AKAP8O43823 692 aaKnown RBP11.82□□□□□ -0.52
CLK3-216ENST00000564468 KRT33AO76009 404 aa11.82□□□□□ -0.52
CLK3-216ENST00000564468 MT-ATP6P00846 226 aa11.82□□□□□ -0.52
CLK3-216ENST00000564468 IGHV3-9P01782 118 aa11.82□□□□□ -0.52
CLK3-216ENST00000564468 IFNA8P32881 189 aa11.82□□□□□ -0.52
CLK3-216ENST00000564468 NUDT2P50583 147 aa11.82□□□□□ -0.52
CLK3-216ENST00000564468 P2RY4P51582 365 aa11.82□□□□□ -0.52
CLK3-216ENST00000564468 IST1P53990 364 aa11.82□□□□□ -0.52
CLK3-216ENST00000564468 TSC22D1Q15714 1073 aa11.82□□□□□ -0.52
CLK3-216ENST00000564468 TAB1Q15750 504 aa11.82□□□□□ -0.52
CLK3-216ENST00000564468 STK11Q15831 433 aa11.82□□□□□ -0.52
CLK3-216ENST00000564468 LRRC23Q53EV4 343 aaPredicted RBP11.82□□□□□ -0.52
CLK3-216ENST00000564468 TTC33Q6PID6 262 aaPredicted RBP11.82□□□□□ -0.52
CLK3-216ENST00000564468 CREB3L2Q70SY1 520 aa11.82□□□□□ -0.52
CLK3-216ENST00000564468 TREML1Q86YW5 311 aa11.82□□□□□ -0.52
CLK3-216ENST00000564468 SLC15A3Q8IY34 581 aa11.82□□□□□ -0.52
CLK3-216ENST00000564468 SCAIQ8N9R8 606 aa11.82□□□□□ -0.52
CLK3-216ENST00000564468 ADAMTS16Q8TE57 1224 aa11.82□□□□□ -0.52
CLK3-216ENST00000564468 MBD6Q96DN6 1003 aa11.82□□□□□ -0.52
CLK3-216ENST00000564468 PLPPR2Q96GM1 343 aa11.82□□□□□ -0.52
CLK3-216ENST00000564468 FOXC2Q99958 501 aa11.82□□□□□ -0.52
CLK3-216ENST00000564468 WFDC6Q9BQY6 131 aa11.82□□□□□ -0.52
CLK3-216ENST00000564468 SLCO5A1Q9H2Y9 848 aa11.82□□□□□ -0.52
CLK3-216ENST00000564468 LIME1Q9H400 295 aa11.82□□□□□ -0.52
CLK3-216ENST00000564468 CCM2LQ9NUG4 571 aaPredicted RBP11.82□□□□□ -0.52
CLK3-216ENST00000564468 PLEKHA6Q9Y2H5 1048 aa11.82□□□□□ -0.52
CLK3-216ENST00000564468 ARL2BPQ9Y2Y0 163 aa11.82□□□□□ -0.52
CLK3-216ENST00000564468 SH3GLB1Q9Y371 365 aa11.82□□□□□ -0.52
CLK3-216ENST00000564468 RAI1Q7Z5J4 1906 aaPredicted RBP11.82□□□□□ -0.52
CLK3-216ENST00000564468 LOC102725191A0A1B0GVB3 256 aa11.81□□□□□ -0.52
CLK3-216ENST00000564468 OR5H1A6NKK0 313 aa11.81□□□□□ -0.52
CLK3-216ENST00000564468 M0R082 166 aa11.81□□□□□ -0.52
CLK3-216ENST00000564468 GSTA4O15217 222 aa11.81□□□□□ -0.52
CLK3-216ENST00000564468 SIAH2O43255 324 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms