RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 HNRNPCL4P0DMR1 293 aa20.84■□□□□ 0.93
NME3-206ENST00000564252 NCF2P19878 526 aaPredicted RBP20.84■□□□□ 0.93
NME3-206ENST00000564252 SELENOPP49908 381 aa20.84■□□□□ 0.93
NME3-206ENST00000564252 EFNA4P52798 201 aa20.84■□□□□ 0.93
NME3-206ENST00000564252 SLC18A1P54219 525 aa20.84■□□□□ 0.93
NME3-206ENST00000564252 VLDLRP98155 873 aa20.84■□□□□ 0.93
NME3-206ENST00000564252 LGALS3BPQ08380 585 aa20.84■□□□□ 0.93
NME3-206ENST00000564252 PODNL1Q6PEZ8 512 aa20.84■□□□□ 0.93
NME3-206ENST00000564252 C10orf105Q8TEF2 133 aa20.84■□□□□ 0.93
NME3-206ENST00000564252 NANOS1Q8WY41 292 aaKnown RBP20.84■□□□□ 0.93
NME3-206ENST00000564252 FAM168AQ92567 244 aa20.84■□□□□ 0.93
NME3-206ENST00000564252 MANSC1Q9H8J5 431 aa20.84■□□□□ 0.93
NME3-206ENST00000564252 TMEM45AQ9NWC5 275 aa20.84■□□□□ 0.93
NME3-206ENST00000564252 THUMPD1Q9NXG2 353 aaKnown RBP20.84■□□□□ 0.93
NME3-206ENST00000564252 ZNF232Q9UNY5 417 aa20.84■□□□□ 0.93
NME3-206ENST00000564252 PMF1-BGLAPU3KQ54 211 aa20.84■□□□□ 0.93
NME3-206ENST00000564252 ARFGEF3Q5TH69 2177 aa20.84■□□□□ 0.93
NME3-206ENST00000564252 A0A096LPI6 279 aa20.83■□□□□ 0.93
NME3-206ENST00000564252 IGHV1-18A0A0C4DH31 117 aa20.83■□□□□ 0.93
NME3-206ENST00000564252 LGI1O95970 557 aa20.83■□□□□ 0.93
NME3-206ENST00000564252 BMP4P12644 408 aa20.83■□□□□ 0.93
NME3-206ENST00000564252 POLR2JP52435 117 aaKnown RBP20.83■□□□□ 0.93
NME3-206ENST00000564252 SWI5Q1ZZU3 235 aa20.83■□□□□ 0.93
NME3-206ENST00000564252 MST1LQ2TV78 715 aa20.83■□□□□ 0.93
NME3-206ENST00000564252 TBRG1Q3YBR2 411 aa20.83■□□□□ 0.93
NME3-206ENST00000564252 CHRFAM7AQ494W8 412 aa20.83■□□□□ 0.93
NME3-206ENST00000564252 PRAMEF8Q5VWM4 474 aa20.83■□□□□ 0.93
NME3-206ENST00000564252 PRAMEF7Q5VXH5 474 aa20.83■□□□□ 0.93
NME3-206ENST00000564252 LINGO2Q7L985 606 aa20.83■□□□□ 0.93
NME3-206ENST00000564252 EPHX4Q8IUS5 362 aa20.83■□□□□ 0.93
NME3-206ENST00000564252 OR1K1Q8NGR3 316 aa20.83■□□□□ 0.93
NME3-206ENST00000564252 STK35Q8TDR2 534 aa20.83■□□□□ 0.93
NME3-206ENST00000564252 OBP2BQ9NPH6 170 aa20.83■□□□□ 0.93
NME3-206ENST00000564252 RASD1Q9Y272 281 aa20.83■□□□□ 0.93
NME3-206ENST00000564252 FTCDNL1E5RQL4 147 aa20.82■□□□□ 0.92
NME3-206ENST00000564252 ZNF587BE7ETH6 402 aa20.82■□□□□ 0.92
NME3-206ENST00000564252 UBDO15205 165 aa20.82■□□□□ 0.92
NME3-206ENST00000564252 KRT33AO76009 404 aa20.82■□□□□ 0.92
NME3-206ENST00000564252 LY6HO94772 140 aa20.82■□□□□ 0.92
NME3-206ENST00000564252 IFNA2P01563 188 aa20.82■□□□□ 0.92
NME3-206ENST00000564252 C6orf10Q5SRN2 563 aa20.82■□□□□ 0.92
NME3-206ENST00000564252 GTF2H4Q92759 462 aa20.82■□□□□ 0.92
NME3-206ENST00000564252 FBXO17Q96EF6 278 aa20.82■□□□□ 0.92
NME3-206ENST00000564252 ALKBH3Q96Q83 286 aaPredicted RBP20.82■□□□□ 0.92
NME3-206ENST00000564252 SLC38A2Q96QD8 506 aa20.82■□□□□ 0.92
NME3-206ENST00000564252 PAIP1Q9H074 479 aaKnown RBP20.82■□□□□ 0.92
NME3-206ENST00000564252 ARMC7Q9H6L4 198 aa20.82■□□□□ 0.92
NME3-206ENST00000564252 IFT52Q9Y366 437 aa20.82■□□□□ 0.92
NME3-206ENST00000564252 TMEM247A6NEH6 219 aa20.81■□□□□ 0.92
NME3-206ENST00000564252 F12P00748 615 aaPredicted RBP20.81■□□□□ 0.92
NME3-206ENST00000564252 CSF3P09919 207 aa20.81■□□□□ 0.92
NME3-206ENST00000564252 NUDT7P0C024 238 aa20.81■□□□□ 0.92
NME3-206ENST00000564252 EGR4Q05215 589 aa20.81■□□□□ 0.92
NME3-206ENST00000564252 RGNQ15493 299 aa20.81■□□□□ 0.92
NME3-206ENST00000564252 ZNF311Q5JNZ3 666 aa20.81■□□□□ 0.92
NME3-206ENST00000564252 NIPAL3Q6P499 406 aa20.81■□□□□ 0.92
NME3-206ENST00000564252 MFSD8Q8NHS3 518 aa20.81■□□□□ 0.92
NME3-206ENST00000564252 PROX1Q92786 737 aa20.81■□□□□ 0.92
NME3-206ENST00000564252 BCL2L2Q92843 193 aaPredicted RBP20.81■□□□□ 0.92
NME3-206ENST00000564252 PTDSS2Q9BVG9 487 aa20.81■□□□□ 0.92
NME3-206ENST00000564252 CACYBPQ9HB71 228 aaKnown RBP20.81■□□□□ 0.92
NME3-206ENST00000564252 BCL2L10Q9HD36 194 aa20.81■□□□□ 0.92
NME3-206ENST00000564252 PCDHB14Q9Y5E9 798 aa20.81■□□□□ 0.92
NME3-206ENST00000564252 OR6C65A6NJZ3 312 aa20.8■□□□□ 0.92
NME3-206ENST00000564252 ZNF500O60304 480 aaPredicted RBP20.8■□□□□ 0.92
NME3-206ENST00000564252 UPK3AO75631 287 aa20.8■□□□□ 0.92
NME3-206ENST00000564252 AHSA1O95433 338 aa20.8■□□□□ 0.92
NME3-206ENST00000564252 PNMTP11086 282 aa20.8■□□□□ 0.92
NME3-206ENST00000564252 HOXB9P17482 250 aaPredicted RBP20.8■□□□□ 0.92
NME3-206ENST00000564252 MAGOHP61326 146 aaKnown RBP20.8■□□□□ 0.92
NME3-206ENST00000564252 HOXC5Q00444 222 aa20.8■□□□□ 0.92
NME3-206ENST00000564252 MIER2Q8N344 545 aa20.8■□□□□ 0.92
NME3-206ENST00000564252 MAL2Q969L2 176 aa20.8■□□□□ 0.92
NME3-206ENST00000564252 SLC35B4Q969S0 331 aa20.8■□□□□ 0.92
NME3-206ENST00000564252 NELFAQ9H3P2 528 aa20.8■□□□□ 0.92
NME3-206ENST00000564252 A4GALTQ9NPC4 353 aa20.8■□□□□ 0.92
NME3-206ENST00000564252 NKIRAS1Q9NYS0 192 aa20.8■□□□□ 0.92
NME3-206ENST00000564252 ARPC4-TTLL3A0A0A6YYG9 625 aa20.79■□□□□ 0.92
NME3-206ENST00000564252 FZD7O75084 574 aa20.79■□□□□ 0.92
NME3-206ENST00000564252 BMP2P12643 396 aa20.79■□□□□ 0.92
NME3-206ENST00000564252 PAX7P23759 505 aa20.79■□□□□ 0.92
NME3-206ENST00000564252 SLC2A7Q6PXP3 512 aa20.79■□□□□ 0.92
NME3-206ENST00000564252 KDM8Q8N371 416 aa20.79■□□□□ 0.92
NME3-206ENST00000564252 MAGEE2Q8TD90 523 aaPredicted RBP20.79■□□□□ 0.92
NME3-206ENST00000564252 TLCD1Q96CP7 247 aa20.79■□□□□ 0.92
NME3-206ENST00000564252 SLC25A36Q96CQ1 311 aa20.79■□□□□ 0.92
NME3-206ENST00000564252 SORCS2Q96PQ0 1159 aa20.79■□□□□ 0.92
NME3-206ENST00000564252 ZNF317Q96PQ6 595 aaPredicted RBP20.79■□□□□ 0.92
NME3-206ENST00000564252 KATNB1Q9BVA0 655 aa20.79■□□□□ 0.92
NME3-206ENST00000564252 RSPO3Q9BXY4 272 aaPredicted RBP20.79■□□□□ 0.92
NME3-206ENST00000564252 LINC00470Q9BZP3 86 aa20.79■□□□□ 0.92
NME3-206ENST00000564252 CRNNQ9UBG3 495 aaPredicted RBP20.79■□□□□ 0.92
NME3-206ENST00000564252 RNF212BA8MTL3 300 aa20.78■□□□□ 0.92
NME3-206ENST00000564252 CLIC1O00299 241 aa20.78■□□□□ 0.92
NME3-206ENST00000564252 NR5A2O00482 541 aa20.78■□□□□ 0.92
NME3-206ENST00000564252 FAM157CP0CG43 387 aa20.78■□□□□ 0.92
NME3-206ENST00000564252 IGHV4-31P0DP07 118 aa20.78■□□□□ 0.92
NME3-206ENST00000564252 USF1P22415 310 aaPredicted RBP20.78■□□□□ 0.92
NME3-206ENST00000564252 RPS5P46782 204 aaKnown RBP20.78■□□□□ 0.92
NME3-206ENST00000564252 UBE2NP61088 152 aaKnown RBP20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms