RNA–Protein interactions for RNA: ENST00000563798.1

VPS9D1-203, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-203ENST00000563798 ETS2P15036 469 aa15.06■□□□□ 0
VPS9D1-203ENST00000563798 FABP6P51161 128 aa15.06■□□□□ 0
VPS9D1-203ENST00000563798 ZNF311Q5JNZ3 666 aa15.06■□□□□ 0
VPS9D1-203ENST00000563798 C9orf135Q5VTT2 229 aa15.06■□□□□ 0
VPS9D1-203ENST00000563798 EPHX4Q8IUS5 362 aa15.06■□□□□ 0
VPS9D1-203ENST00000563798 MAPK1IP1LQ8NDC0 245 aa15.06■□□□□ 0
VPS9D1-203ENST00000563798 CACYBPQ9HB71 228 aaKnown RBP15.06■□□□□ 0
VPS9D1-203ENST00000563798 SLC52A3Q9NQ40 469 aa15.06■□□□□ 0
VPS9D1-203ENST00000563798 ANK3Q12955 4377 aaKnown RBP15.06■□□□□ 0
VPS9D1-203ENST00000563798 ELOA3DA6NLF2 546 aaPredicted RBP15.05■□□□□ -0
VPS9D1-203ENST00000563798 SSX4O60224 188 aa15.05■□□□□ -0
VPS9D1-203ENST00000563798 NCF2P19878 526 aaPredicted RBP15.05■□□□□ -0
VPS9D1-203ENST00000563798 PTNP21246 168 aa15.05■□□□□ -0
VPS9D1-203ENST00000563798 PRKAR1BP31321 381 aa15.05■□□□□ -0
VPS9D1-203ENST00000563798 APOBEC3AP31941 199 aaPredicted RBP15.05■□□□□ -0
VPS9D1-203ENST00000563798 EGR4Q05215 589 aa15.05■□□□□ -0
VPS9D1-203ENST00000563798 ELOA3BQ3SY89 546 aa15.05■□□□□ -0
VPS9D1-203ENST00000563798 AGBL2Q5U5Z8 902 aa15.05■□□□□ -0
VPS9D1-203ENST00000563798 SLC2A7Q6PXP3 512 aa15.05■□□□□ -0
VPS9D1-203ENST00000563798 BLOC1S3Q6QNY0 202 aa15.05■□□□□ -0
VPS9D1-203ENST00000563798 GPAT4Q86UL3 456 aa15.05■□□□□ -0
VPS9D1-203ENST00000563798 FUNDC1Q8IVP5 155 aa15.05■□□□□ -0
VPS9D1-203ENST00000563798 LSMEM1Q8N8F7 131 aa15.05■□□□□ -0
VPS9D1-203ENST00000563798 ANKK1Q8NFD2 765 aa15.05■□□□□ -0
VPS9D1-203ENST00000563798 ELOA3Q8NG57 546 aa15.05■□□□□ -0
VPS9D1-203ENST00000563798 MAGEE2Q8TD90 523 aaPredicted RBP15.05■□□□□ -0
VPS9D1-203ENST00000563798 RHNO1Q9BSD3 238 aa15.05■□□□□ -0
VPS9D1-203ENST00000563798 PTDSS2Q9BVG9 487 aa15.05■□□□□ -0
VPS9D1-203ENST00000563798 C1QTNF6Q9BXI9 259 aa15.05■□□□□ -0
VPS9D1-203ENST00000563798 RSPO3Q9BXY4 272 aaPredicted RBP15.05■□□□□ -0
VPS9D1-203ENST00000563798 LINC00470Q9BZP3 86 aa15.05■□□□□ -0
VPS9D1-203ENST00000563798 ADPRHL2Q9NX46 363 aa15.05■□□□□ -0
VPS9D1-203ENST00000563798 SLC25A37Q9NYZ2 338 aa15.05■□□□□ -0
VPS9D1-203ENST00000563798 ARPC4-TTLL3A0A0A6YYG9 625 aa15.04■□□□□ -0
VPS9D1-203ENST00000563798 AHSA1O95433 338 aa15.04■□□□□ -0
VPS9D1-203ENST00000563798 TP53P04637 393 aaPredicted RBP15.04■□□□□ -0
VPS9D1-203ENST00000563798 NUDT6P53370 316 aa15.04■□□□□ -0
VPS9D1-203ENST00000563798 C3orf36Q3SXR2 165 aa15.04■□□□□ -0
VPS9D1-203ENST00000563798 C5orf46Q6UWT4 87 aa15.04■□□□□ -0
VPS9D1-203ENST00000563798 MSRB3Q8IXL7 192 aa15.04■□□□□ -0
VPS9D1-203ENST00000563798 GOLGA6L1Q8N7Z2 621 aa15.04■□□□□ -0
VPS9D1-203ENST00000563798 FAM169BQ8N8A8 192 aa15.04■□□□□ -0
VPS9D1-203ENST00000563798 OR1K1Q8NGR3 316 aa15.04■□□□□ -0
VPS9D1-203ENST00000563798 MAL2Q969L2 176 aa15.04■□□□□ -0
VPS9D1-203ENST00000563798 MDFIQ99750 246 aa15.04■□□□□ -0
VPS9D1-203ENST00000563798 CCDC28BQ9BUN5 200 aa15.04■□□□□ -0
VPS9D1-203ENST00000563798 TCF7L2Q9NQB0 619 aa15.04■□□□□ -0
VPS9D1-203ENST00000563798 CRNNQ9UBG3 495 aaPredicted RBP15.04■□□□□ -0
VPS9D1-203ENST00000563798 RCE1Q9Y256 329 aa15.04■□□□□ -0
VPS9D1-203ENST00000563798 ABCA1O95477 2261 aa15.04■□□□□ -0
VPS9D1-203ENST00000563798 IGHV4-30-2A0A087WSY4 118 aa15.03■□□□□ -0
VPS9D1-203ENST00000563798 TRBV5-3A0A0A0MS03 114 aa15.03■□□□□ -0
VPS9D1-203ENST00000563798 LOC102725191A0A1B0GVB3 256 aa15.03■□□□□ -0
VPS9D1-203ENST00000563798 ZNF587BE7ETH6 402 aa15.03■□□□□ -0
VPS9D1-203ENST00000563798 RPL36A-HNRNPH2H7BZ11 118 aa15.03■□□□□ -0
VPS9D1-203ENST00000563798 ZNF432O94892 652 aa15.03■□□□□ -0
VPS9D1-203ENST00000563798 ARAFP10398 606 aa15.03■□□□□ -0
VPS9D1-203ENST00000563798 PNMTP11086 282 aa15.03■□□□□ -0
VPS9D1-203ENST00000563798 BMP4P12644 408 aa15.03■□□□□ -0
VPS9D1-203ENST00000563798 HOXB1P14653 301 aaPredicted RBP15.03■□□□□ -0
VPS9D1-203ENST00000563798 PPIBP23284 216 aaKnown RBP15.03■□□□□ -0
VPS9D1-203ENST00000563798 SELENOPP49908 381 aa15.03■□□□□ -0
VPS9D1-203ENST00000563798 IDH3AP50213 366 aa15.03■□□□□ -0
VPS9D1-203ENST00000563798 STX1BP61266 288 aa15.03■□□□□ -0
VPS9D1-203ENST00000563798 CHRNB3Q05901 458 aa15.03■□□□□ -0
VPS9D1-203ENST00000563798 LOXL1Q08397 574 aaPredicted RBP15.03■□□□□ -0
VPS9D1-203ENST00000563798 RAB35Q15286 201 aa15.03■□□□□ -0
VPS9D1-203ENST00000563798 SWI5Q1ZZU3 235 aa15.03■□□□□ -0
VPS9D1-203ENST00000563798 TBRG1Q3YBR2 411 aa15.03■□□□□ -0
VPS9D1-203ENST00000563798 HIKESHIQ53FT3 197 aa15.03■□□□□ -0
VPS9D1-203ENST00000563798 DHRS4L2Q6PKH6 230 aa15.03■□□□□ -0
VPS9D1-203ENST00000563798 KLHL24Q6TFL4 600 aa15.03■□□□□ -0
VPS9D1-203ENST00000563798 CLEC2AQ6UVW9 174 aa15.03■□□□□ -0
VPS9D1-203ENST00000563798 BCL2L2Q92843 193 aaPredicted RBP15.03■□□□□ -0
VPS9D1-203ENST00000563798 MOV10Q9HCE1 1003 aaKnown RBP15.03■□□□□ -0
VPS9D1-203ENST00000563798 ATP23Q9Y6H3 246 aa15.03■□□□□ -0
VPS9D1-203ENST00000563798 SONP18583 2426 aaKnown RBP15.02■□□□□ -0
VPS9D1-203ENST00000563798 ATP6V1G2-DDX39BF2Z307 99 aa15.02■□□□□ -0
VPS9D1-203ENST00000563798 POLR3GO15318 223 aaPredicted RBP15.02■□□□□ -0
VPS9D1-203ENST00000563798 OR2T1O43869 369 aa15.02■□□□□ -0
VPS9D1-203ENST00000563798 SLC25A16P16260 332 aa15.02■□□□□ -0
VPS9D1-203ENST00000563798 EFNA4P52798 201 aa15.02■□□□□ -0
VPS9D1-203ENST00000563798 SH3BGRP55822 239 aaPredicted RBP15.02■□□□□ -0
VPS9D1-203ENST00000563798 MST1LQ2TV78 715 aa15.02■□□□□ -0
VPS9D1-203ENST00000563798 LINGO2Q7L985 606 aa15.02■□□□□ -0
VPS9D1-203ENST00000563798 NET1Q7Z628 596 aaPredicted RBP15.02■□□□□ -0
VPS9D1-203ENST00000563798 HIPK1Q86Z02 1210 aa15.02■□□□□ -0
VPS9D1-203ENST00000563798 DNAJA4Q8WW22 397 aaPredicted RBP15.02■□□□□ -0
VPS9D1-203ENST00000563798 KTI12Q96EK9 354 aaPredicted RBP15.02■□□□□ -0
VPS9D1-203ENST00000563798 KATNB1Q9BVA0 655 aa15.02■□□□□ -0
VPS9D1-203ENST00000563798 TMEM38AQ9H6F2 299 aa15.02■□□□□ -0
VPS9D1-203ENST00000563798 SLAMF8Q9P0V8 285 aa15.02■□□□□ -0
VPS9D1-203ENST00000563798 B3GAT1Q9P2W7 334 aa15.02■□□□□ -0
VPS9D1-203ENST00000563798 CHD3Q12873 2000 aaKnown RBP15.02□□□□□ -0.01
VPS9D1-203ENST00000563798 IGHV1-18A0A0C4DH31 117 aa15.01□□□□□ -0.01
VPS9D1-203ENST00000563798 C5orf58C9J3I9 102 aa15.01□□□□□ -0.01
VPS9D1-203ENST00000563798 UPK3AO75631 287 aa15.01□□□□□ -0.01
VPS9D1-203ENST00000563798 KRT33AO76009 404 aa15.01□□□□□ -0.01
VPS9D1-203ENST00000563798 LGI1O95970 557 aa15.01□□□□□ -0.01
VPS9D1-203ENST00000563798 IGLV1-44P01699 117 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms