RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 CYTH4Q9UIA0 394 aa2□□□□□ -2.09
HDGFL3-202ENST00000562702 PTBP2Q9UKA9 531 aaKnown RBP2□□□□□ -2.09
HDGFL3-202ENST00000562702 RNF6Q9Y252 685 aa2□□□□□ -2.09
HDGFL3-202ENST00000562702 LOC285556D6RIA3 1793 aa2□□□□□ -2.09
HDGFL3-202ENST00000562702 ATG2AQ2TAZ0 1938 aa1.99□□□□□ -2.09
HDGFL3-202ENST00000562702 BAZ2AQ9UIF9 1905 aaKnown RBP1.99□□□□□ -2.09
HDGFL3-202ENST00000562702 MAPK8IP3Q9UPT6 1336 aa1.99□□□□□ -2.09
HDGFL3-202ENST00000562702 TUBAL3A6NHL2 446 aa1.99□□□□□ -2.09
HDGFL3-202ENST00000562702 H0Y8G0 127 aa1.99□□□□□ -2.09
HDGFL3-202ENST00000562702 STAMBPO95630 424 aa1.99□□□□□ -2.09
HDGFL3-202ENST00000562702 PSG2P11465 335 aa1.99□□□□□ -2.09
HDGFL3-202ENST00000562702 ETS1P14921 441 aa1.99□□□□□ -2.09
HDGFL3-202ENST00000562702 PSMA5P28066 241 aa1.99□□□□□ -2.09
HDGFL3-202ENST00000562702 GDI1P31150 447 aa1.99□□□□□ -2.09
HDGFL3-202ENST00000562702 UGT1A5P35504 534 aa1.99□□□□□ -2.09
HDGFL3-202ENST00000562702 BTDP43251 543 aa1.99□□□□□ -2.09
HDGFL3-202ENST00000562702 HNMTP50135 292 aa1.99□□□□□ -2.09
HDGFL3-202ENST00000562702 LIM2P55344 173 aa1.99□□□□□ -2.09
HDGFL3-202ENST00000562702 ATP5IP56385 69 aaPredicted RBP1.99□□□□□ -2.09
HDGFL3-202ENST00000562702 ACTR1AP61163 376 aa1.99□□□□□ -2.09
HDGFL3-202ENST00000562702 RCN1Q15293 331 aa1.99□□□□□ -2.09
HDGFL3-202ENST00000562702 MPPED2Q15777 294 aa1.99□□□□□ -2.09
HDGFL3-202ENST00000562702 CCDC152Q4G0S7 254 aa1.99□□□□□ -2.09
HDGFL3-202ENST00000562702 BOLA3Q53S33 107 aa1.99□□□□□ -2.09
HDGFL3-202ENST00000562702 ATAD3BQ5T9A4 648 aa1.99□□□□□ -2.09
HDGFL3-202ENST00000562702 C12orf60Q5U649 245 aa1.99□□□□□ -2.09
HDGFL3-202ENST00000562702 IL34Q6ZMJ4 242 aa1.99□□□□□ -2.09
HDGFL3-202ENST00000562702 NANOGNBQ7Z5D8 188 aa1.99□□□□□ -2.09
HDGFL3-202ENST00000562702 OR56B2PQ8NGI1 322 aa1.99□□□□□ -2.09
HDGFL3-202ENST00000562702 GIPC3Q8TF64 312 aa1.99□□□□□ -2.09
HDGFL3-202ENST00000562702 DCUN1D4Q92564 292 aa1.99□□□□□ -2.09
HDGFL3-202ENST00000562702 TPPP3Q9BW30 176 aa1.99□□□□□ -2.09
HDGFL3-202ENST00000562702 GCOM2Q9BZD3 368 aaPredicted RBP1.99□□□□□ -2.09
HDGFL3-202ENST00000562702 SLC25A39Q9BZJ4 359 aaPredicted RBP1.99□□□□□ -2.09
HDGFL3-202ENST00000562702 RAB17Q9H0T7 212 aa1.99□□□□□ -2.09
HDGFL3-202ENST00000562702 HSD3B7Q9H2F3 369 aa1.99□□□□□ -2.09
HDGFL3-202ENST00000562702 PPDPFQ9H3Y8 114 aa1.99□□□□□ -2.09
HDGFL3-202ENST00000562702 TM9SF3Q9HD45 589 aa1.99□□□□□ -2.09
HDGFL3-202ENST00000562702 APMAPQ9HDC9 416 aa1.99□□□□□ -2.09
HDGFL3-202ENST00000562702 NMRK1Q9NWW6 199 aa1.99□□□□□ -2.09
HDGFL3-202ENST00000562702 NINJ2Q9NZG7 142 aa1.99□□□□□ -2.09
HDGFL3-202ENST00000562702 LCMT1Q9UIC8 334 aa1.99□□□□□ -2.09
HDGFL3-202ENST00000562702 RIMS3Q9UJD0 308 aa1.99□□□□□ -2.09
HDGFL3-202ENST00000562702 IFT52Q9Y366 437 aa1.99□□□□□ -2.09
HDGFL3-202ENST00000562702 MAB21L2Q9Y586 359 aa1.99□□□□□ -2.09
HDGFL3-202ENST00000562702 AP4B1Q9Y6B7 739 aa1.99□□□□□ -2.09
HDGFL3-202ENST00000562702 CLCA3PQ9Y6N3 262 aa1.99□□□□□ -2.09
HDGFL3-202ENST00000562702 COL1A1P02452 1464 aaPredicted RBP1.99□□□□□ -2.09
HDGFL3-202ENST00000562702 TET1Q8NFU7 2136 aa1.99□□□□□ -2.09
HDGFL3-202ENST00000562702 NAV1Q8NEY1 1877 aa1.99□□□□□ -2.09
HDGFL3-202ENST00000562702 KIF16BQ96L93 1317 aa1.98□□□□□ -2.09
HDGFL3-202ENST00000562702 NCOR1O75376 2440 aa1.98□□□□□ -2.09
HDGFL3-202ENST00000562702 RANBP2P49792 3224 aaKnown RBP1.98□□□□□ -2.09
HDGFL3-202ENST00000562702 MYH7BA7E2Y1 1941 aa1.98□□□□□ -2.09
HDGFL3-202ENST00000562702 C15orf38-AP3S2A0A0A6YYH1 394 aa1.98□□□□□ -2.09
HDGFL3-202ENST00000562702 LINC00854A0A1B0GVQ3 168 aa1.98□□□□□ -2.09
HDGFL3-202ENST00000562702 FAM230AA0A1W2PPH8 454 aa1.98□□□□□ -2.09
HDGFL3-202ENST00000562702 OR6C65A6NJZ3 312 aa1.98□□□□□ -2.09
HDGFL3-202ENST00000562702 E9PBE3 544 aa1.98□□□□□ -2.09
HDGFL3-202ENST00000562702 BOLA2-SMG1P6H3BVE0 249 aa1.98□□□□□ -2.09
HDGFL3-202ENST00000562702 MAGEB3O15480 346 aa1.98□□□□□ -2.09
HDGFL3-202ENST00000562702 WBP4O75554 376 aaKnown RBP1.98□□□□□ -2.09
HDGFL3-202ENST00000562702 TOM1L1O75674 476 aa1.98□□□□□ -2.09
HDGFL3-202ENST00000562702 CIB2O75838 187 aa1.98□□□□□ -2.09
HDGFL3-202ENST00000562702 YEATS4O95619 227 aa1.98□□□□□ -2.09
HDGFL3-202ENST00000562702 IGHV3-48P01763 117 aa1.98□□□□□ -2.09
HDGFL3-202ENST00000562702 S100A9P06702 114 aaKnown RBP1.98□□□□□ -2.09
HDGFL3-202ENST00000562702 HBQ1P09105 142 aa1.98□□□□□ -2.09
HDGFL3-202ENST00000562702 CCDC172P0C7W6 258 aa1.98□□□□□ -2.09
HDGFL3-202ENST00000562702 XRCC1P18887 633 aaPredicted RBP1.98□□□□□ -2.09
HDGFL3-202ENST00000562702 SERPINA2P20848 420 aa1.98□□□□□ -2.09
HDGFL3-202ENST00000562702 CCNE1P24864 410 aa1.98□□□□□ -2.09
HDGFL3-202ENST00000562702 DPP4P27487 766 aa1.98□□□□□ -2.09
HDGFL3-202ENST00000562702 CCND2P30279 289 aa1.98□□□□□ -2.09
HDGFL3-202ENST00000562702 CCT6AP40227 531 aaKnown RBP1.98□□□□□ -2.09
HDGFL3-202ENST00000562702 CD151P48509 253 aa1.98□□□□□ -2.09
HDGFL3-202ENST00000562702 GBX2P52951 348 aaPredicted RBP1.98□□□□□ -2.09
HDGFL3-202ENST00000562702 MTTPP55157 894 aa1.98□□□□□ -2.09
HDGFL3-202ENST00000562702 NTHL1P78549 312 aa1.98□□□□□ -2.09
HDGFL3-202ENST00000562702 SPAG1Q07617 926 aa1.98□□□□□ -2.09
HDGFL3-202ENST00000562702 RGS1Q08116 209 aa1.98□□□□□ -2.09
HDGFL3-202ENST00000562702 TCP10Q12799 353 aa1.98□□□□□ -2.09
HDGFL3-202ENST00000562702 SCGB2A2Q13296 93 aa1.98□□□□□ -2.09
HDGFL3-202ENST00000562702 STK11Q15831 433 aa1.98□□□□□ -2.09
HDGFL3-202ENST00000562702 KCTD21Q4G0X4 260 aa1.98□□□□□ -2.09
HDGFL3-202ENST00000562702 CFAP157Q5JU67 520 aa1.98□□□□□ -2.09
HDGFL3-202ENST00000562702 LDLRAP1Q5SW96 308 aa1.98□□□□□ -2.09
HDGFL3-202ENST00000562702 RAET1GQ6H3X3 334 aa1.98□□□□□ -2.09
HDGFL3-202ENST00000562702 APOBEC3HQ6NTF7 200 aaKnown RBP1.98□□□□□ -2.09
HDGFL3-202ENST00000562702 Q6P435 159 aa1.98□□□□□ -2.09
HDGFL3-202ENST00000562702 BBS5Q8N3I7 341 aa1.98□□□□□ -2.09
HDGFL3-202ENST00000562702 DEFB123Q8N688 67 aa1.98□□□□□ -2.09
HDGFL3-202ENST00000562702 FAM133AQ8N9E0 248 aa1.98□□□□□ -2.09
HDGFL3-202ENST00000562702 DCAF4L2Q8NA75 395 aa1.98□□□□□ -2.09
HDGFL3-202ENST00000562702 OR52K1Q8NGK4 314 aa1.98□□□□□ -2.09
HDGFL3-202ENST00000562702 C7orf33Q8WU49 177 aa1.98□□□□□ -2.09
HDGFL3-202ENST00000562702 DNAJA4Q8WW22 397 aaPredicted RBP1.98□□□□□ -2.09
HDGFL3-202ENST00000562702 RAPGEF5Q92565 580 aa1.98□□□□□ -2.09
HDGFL3-202ENST00000562702 MRPL38Q96DV4 380 aaKnown RBP1.98□□□□□ -2.09
HDGFL3-202ENST00000562702 TMEM101Q96IK0 257 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms