RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 KRTAP10-12P60413 245 aa4.1□□□□□ -1.75
SMG1-206ENST00000562668 HBA1P69905 142 aa4.1□□□□□ -1.75
SMG1-206ENST00000562668 ACTN3Q08043 901 aaPredicted RBP4.1□□□□□ -1.75
SMG1-206ENST00000562668 EFNB3Q15768 340 aa4.1□□□□□ -1.75
SMG1-206ENST00000562668 GSTA3Q16772 222 aa4.1□□□□□ -1.75
SMG1-206ENST00000562668 ZNF791Q3KP31 576 aaPredicted RBP4.1□□□□□ -1.75
SMG1-206ENST00000562668 NADK2Q4G0N4 442 aa4.1□□□□□ -1.75
SMG1-206ENST00000562668 ESCO2Q56NI9 601 aa4.1□□□□□ -1.75
SMG1-206ENST00000562668 PIGGQ5H8A4 983 aa4.1□□□□□ -1.75
SMG1-206ENST00000562668 ACER2Q5QJU3 275 aa4.1□□□□□ -1.75
SMG1-206ENST00000562668 CPTPQ5TA50 214 aa4.1□□□□□ -1.75
SMG1-206ENST00000562668 AP1ARQ63HQ0 302 aa4.1□□□□□ -1.75
SMG1-206ENST00000562668 HIST2H2BCQ6DN03 193 aa4.1□□□□□ -1.75
SMG1-206ENST00000562668 OR4F3Q6IEY1 312 aa4.1□□□□□ -1.75
SMG1-206ENST00000562668 TMEM107Q6UX40 140 aa4.1□□□□□ -1.75
SMG1-206ENST00000562668 ISLR2Q6UXK2 745 aa4.1□□□□□ -1.75
SMG1-206ENST00000562668 HSDL2Q6YN16 418 aa4.1□□□□□ -1.75
SMG1-206ENST00000562668 LINC00696Q6ZRV3 163 aa4.1□□□□□ -1.75
SMG1-206ENST00000562668 PRSS45Q7RTY3 260 aa4.1□□□□□ -1.75
SMG1-206ENST00000562668 R3HCC1LQ7Z5L2 792 aaKnown RBP4.1□□□□□ -1.75
SMG1-206ENST00000562668 PIGWQ7Z7B1 504 aa4.1□□□□□ -1.75
SMG1-206ENST00000562668 RPS19BP1Q86WX3 136 aaKnown RBP4.1□□□□□ -1.75
SMG1-206ENST00000562668 MSRB3Q8IXL7 192 aa4.1□□□□□ -1.75
SMG1-206ENST00000562668 CLECL1Q8IZS7 167 aa4.1□□□□□ -1.75
SMG1-206ENST00000562668 FAM9CQ8IZT9 166 aa4.1□□□□□ -1.75
SMG1-206ENST00000562668 BEST3Q8N1M1 668 aa4.1□□□□□ -1.75
SMG1-206ENST00000562668 MDS2Q8NDY4 140 aa4.1□□□□□ -1.75
SMG1-206ENST00000562668 CATSPER1Q8NEC5 780 aa4.1□□□□□ -1.75
SMG1-206ENST00000562668 C17orf47Q8NEP4 570 aa4.1□□□□□ -1.75
SMG1-206ENST00000562668 OR7G1Q8NGA0 311 aa4.1□□□□□ -1.75
SMG1-206ENST00000562668 OR52R1Q8NGF1 315 aa4.1□□□□□ -1.75
SMG1-206ENST00000562668 CDC26Q8NHZ8 85 aa4.1□□□□□ -1.75
SMG1-206ENST00000562668 C9orf43Q8TAL5 461 aaPredicted RBP4.1□□□□□ -1.75
SMG1-206ENST00000562668 OR5P2Q8WZ92 322 aa4.1□□□□□ -1.75
SMG1-206ENST00000562668 ERGIC1Q969X5 290 aa4.1□□□□□ -1.75
SMG1-206ENST00000562668 PPCDCQ96CD2 204 aa4.1□□□□□ -1.75
SMG1-206ENST00000562668 ERP27Q96DN0 273 aa4.1□□□□□ -1.75
SMG1-206ENST00000562668 FAM120BQ96EK7 910 aaKnown RBP4.1□□□□□ -1.75
SMG1-206ENST00000562668 RBM18Q96H35 190 aaKnown RBP4.1□□□□□ -1.75
SMG1-206ENST00000562668 TMEM19Q96HH6 336 aa4.1□□□□□ -1.75
SMG1-206ENST00000562668 CCDC115Q96NT0 180 aa4.1□□□□□ -1.75
SMG1-206ENST00000562668 SIGLEC12Q96PQ1 595 aa4.1□□□□□ -1.75
SMG1-206ENST00000562668 BTBD9Q96Q07 612 aa4.1□□□□□ -1.75
SMG1-206ENST00000562668 RASL10BQ96S79 203 aa4.1□□□□□ -1.75
SMG1-206ENST00000562668 BARD1Q99728 777 aaKnown RBP4.1□□□□□ -1.75
SMG1-206ENST00000562668 SIKE1Q9BRV8 207 aa4.1□□□□□ -1.75
SMG1-206ENST00000562668 LMF2Q9BU23 707 aaKnown RBP4.1□□□□□ -1.75
SMG1-206ENST00000562668 SLC25A23Q9BV35 468 aa4.1□□□□□ -1.75
SMG1-206ENST00000562668 ITPAQ9BY32 194 aa4.1□□□□□ -1.75
SMG1-206ENST00000562668 DPY30Q9C005 99 aa4.1□□□□□ -1.75
SMG1-206ENST00000562668 OR8D2Q9GZM6 311 aa4.1□□□□□ -1.75
SMG1-206ENST00000562668 WWTR1Q9GZV5 400 aa4.1□□□□□ -1.75
SMG1-206ENST00000562668 PROK2Q9HC23 129 aa4.1□□□□□ -1.75
SMG1-206ENST00000562668 MIEF1Q9NQG6 463 aa4.1□□□□□ -1.75
SMG1-206ENST00000562668 PFDN4Q9NQP4 134 aa4.1□□□□□ -1.75
SMG1-206ENST00000562668 ZNF71Q9NQZ8 489 aaPredicted RBP4.1□□□□□ -1.75
SMG1-206ENST00000562668 KIF17Q9P2E2 1029 aa4.1□□□□□ -1.75
SMG1-206ENST00000562668 PSME2Q9UL46 239 aa4.1□□□□□ -1.75
SMG1-206ENST00000562668 NTNG1Q9Y2I2 539 aa4.1□□□□□ -1.75
SMG1-206ENST00000562668 CLCA3PQ9Y6N3 262 aa4.1□□□□□ -1.75
SMG1-206ENST00000562668 ZNF780BQ9Y6R6 833 aa4.1□□□□□ -1.75
SMG1-206ENST00000562668 NCKAP5O14513 1909 aa4.1□□□□□ -1.75
SMG1-206ENST00000562668 EML6Q6ZMW3 1958 aa4.1□□□□□ -1.75
SMG1-206ENST00000562668 TLN1Q9Y490 2541 aaKnown RBP4.1□□□□□ -1.75
SMG1-206ENST00000562668 PIEZO2Q9H5I5 2752 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 CACNA1BQ00975 2339 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 A0A0G2JND7 137 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 A0A0G2JPF8 293 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 PRSS51A0A1B0GVH4 220 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 A0A1W2PRB8 838 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 PINLYPA6NC86 204 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 OR5H15A6NDH6 313 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 HSPB2A8KAH6 182 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 A8MUI8 341 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 HNRNPCL3B7ZW38 293 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 MKRN2OSH3BPM6 223 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 WWP2O00308 870 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 POLR3GO15318 223 aaPredicted RBP4.09□□□□□ -1.75
SMG1-206ENST00000562668 OR10H2O60403 315 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 SNX3O60493 162 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 TSPAN2O60636 221 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 HNRNPCL1O60812 293 aaKnown RBP4.09□□□□□ -1.75
SMG1-206ENST00000562668 NDUFS7O75251 213 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 SLC22A3O75751 556 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 OR2J2O76002 312 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 WISP2O76076 250 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 OR6B1O95007 311 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 NKX2-2O95096 273 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 C6orf47O95873 294 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 F10P00742 488 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 IGKV1D-16P01601 117 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 PRB1P04280 392 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 CFC1BP0CG36 223 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 CFC1P0CG37 223 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 HNRNPCL4P0DMR1 293 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 ACP2P11117 423 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 COX7A2P14406 83 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 CAPN3P20807 821 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 DRD5P21918 477 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 CHATP28329 748 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms