RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 GDPD1Q8N9F7 314 aa8.93□□□□□ -0.98
SMG1-205ENST00000561947 SLC38A9Q8NBW4 561 aa8.93□□□□□ -0.98
SMG1-205ENST00000561947 LSM14AQ8ND56 463 aaKnown RBP8.93□□□□□ -0.98
SMG1-205ENST00000561947 ABHD4Q8TB40 342 aa8.93□□□□□ -0.98
SMG1-205ENST00000561947 TAAR8Q969N4 342 aa8.93□□□□□ -0.98
SMG1-205ENST00000561947 DEPDC7Q96QD5 511 aa8.93□□□□□ -0.98
SMG1-205ENST00000561947 LPAR4Q99677 370 aa8.93□□□□□ -0.98
SMG1-205ENST00000561947 TTTY10Q9BZA0 68 aa8.93□□□□□ -0.98
SMG1-205ENST00000561947 NDEL1Q9GZM8 345 aa8.93□□□□□ -0.98
SMG1-205ENST00000561947 FKRPQ9H9S5 495 aa8.93□□□□□ -0.98
SMG1-205ENST00000561947 GRIP1Q9Y3R0 1128 aa8.93□□□□□ -0.98
SMG1-205ENST00000561947 ADAMTS9Q9P2N4 1935 aa8.92□□□□□ -0.98
SMG1-205ENST00000561947 IGHV3-20A0A0C4DH32 117 aa8.92□□□□□ -0.98
SMG1-205ENST00000561947 IGHV5-10-1A0A0J9YXX1 117 aa8.92□□□□□ -0.98
SMG1-205ENST00000561947 C17orf51A8MQB3 221 aa8.92□□□□□ -0.98
SMG1-205ENST00000561947 KHNYNO15037 678 aaKnown RBP8.92□□□□□ -0.98
SMG1-205ENST00000561947 SCO2O43819 266 aa8.92□□□□□ -0.98
SMG1-205ENST00000561947 FADS1O60427 444 aa8.92□□□□□ -0.98
SMG1-205ENST00000561947 SELENOFO60613 162 aa8.92□□□□□ -0.98
SMG1-205ENST00000561947 TMCC2O75069 709 aa8.92□□□□□ -0.98
SMG1-205ENST00000561947 GLCEO94923 617 aa8.92□□□□□ -0.98
SMG1-205ENST00000561947 TXNDC12O95881 172 aa8.92□□□□□ -0.98
SMG1-205ENST00000561947 TDGF1P13385 188 aa8.92□□□□□ -0.98
SMG1-205ENST00000561947 PGCP20142 388 aa8.92□□□□□ -0.98
SMG1-205ENST00000561947 CXCR1P25024 350 aa8.92□□□□□ -0.98
SMG1-205ENST00000561947 SDHAP31040 664 aa8.92□□□□□ -0.98
SMG1-205ENST00000561947 EVI2BP34910 448 aa8.92□□□□□ -0.98
SMG1-205ENST00000561947 ACVR1BP36896 505 aa8.92□□□□□ -0.98
SMG1-205ENST00000561947 CDKN2AP42771 156 aaKnown RBP8.92□□□□□ -0.98
SMG1-205ENST00000561947 GBX2P52951 348 aaPredicted RBP8.92□□□□□ -0.98
SMG1-205ENST00000561947 SLC25A1P53007 311 aa8.92□□□□□ -0.98
SMG1-205ENST00000561947 RNF4P78317 190 aa8.92□□□□□ -0.98
SMG1-205ENST00000561947 RPL18Q07020 188 aaKnown RBP8.92□□□□□ -0.98
SMG1-205ENST00000561947 CBFBQ13951 182 aa8.92□□□□□ -0.98
SMG1-205ENST00000561947 NKAIN1Q4KMZ8 207 aa8.92□□□□□ -0.98
SMG1-205ENST00000561947 LINC01590Q5TEZ4 76 aa8.92□□□□□ -0.98
SMG1-205ENST00000561947 ANKRD37Q7Z713 158 aa8.92□□□□□ -0.98
SMG1-205ENST00000561947 EXD3Q8N9H8 876 aa8.92□□□□□ -0.98
SMG1-205ENST00000561947 TP53INP1Q96A56 240 aa8.92□□□□□ -0.98
SMG1-205ENST00000561947 PELI1Q96FA3 418 aa8.92□□□□□ -0.98
SMG1-205ENST00000561947 RARRES3Q9UL19 164 aa8.92□□□□□ -0.98
SMG1-205ENST00000561947 A0A1W2PQ09 198 aa8.92□□□□□ -0.98
SMG1-205ENST00000561947 OR6C70A6NIJ9 312 aa8.92□□□□□ -0.98
SMG1-205ENST00000561947 AGRPO00253 132 aa8.92□□□□□ -0.98
SMG1-205ENST00000561947 OGG1O15527 345 aa8.92□□□□□ -0.98
SMG1-205ENST00000561947 SSX4O60224 188 aa8.92□□□□□ -0.98
SMG1-205ENST00000561947 HPGDSO60760 199 aa8.92□□□□□ -0.98
SMG1-205ENST00000561947 SCRG1O75711 98 aa8.92□□□□□ -0.98
SMG1-205ENST00000561947 SERPINI2O75830 405 aa8.92□□□□□ -0.98
SMG1-205ENST00000561947 SC5DO75845 299 aa8.92□□□□□ -0.98
SMG1-205ENST00000561947 NUDT14O95848 222 aa8.92□□□□□ -0.98
SMG1-205ENST00000561947 BGLAPP02818 100 aa8.92□□□□□ -0.98
SMG1-205ENST00000561947 HEXBP07686 556 aa8.92□□□□□ -0.98
SMG1-205ENST00000561947 GP1BBP13224 206 aa8.92□□□□□ -0.98
SMG1-205ENST00000561947 SHC1P29353 583 aa8.92□□□□□ -0.98
SMG1-205ENST00000561947 HSF2Q03933 536 aa8.92□□□□□ -0.98
SMG1-205ENST00000561947 CDK5R1Q15078 307 aa8.92□□□□□ -0.98
SMG1-205ENST00000561947 CNIH2Q6PI25 160 aa8.92□□□□□ -0.98
SMG1-205ENST00000561947 METAP1DQ6UB28 335 aaPredicted RBP8.92□□□□□ -0.98
SMG1-205ENST00000561947 CEACAM19Q7Z692 300 aa8.92□□□□□ -0.98
SMG1-205ENST00000561947 PXKQ7Z7A4 578 aa8.92□□□□□ -0.98
SMG1-205ENST00000561947 MS4A15Q8N5U1 240 aa8.92□□□□□ -0.98
SMG1-205ENST00000561947 OR6K6Q8NGW6 343 aa8.92□□□□□ -0.98
SMG1-205ENST00000561947 ACOT12Q8WYK0 555 aa8.92□□□□□ -0.98
SMG1-205ENST00000561947 PIGKQ92643 395 aa8.92□□□□□ -0.98
SMG1-205ENST00000561947 ITPKCQ96DU7 683 aa8.92□□□□□ -0.98
SMG1-205ENST00000561947 MRPL48Q96GC5 212 aaKnown RBP8.92□□□□□ -0.98
SMG1-205ENST00000561947 CCDC74BQ96LY2 380 aa8.92□□□□□ -0.98
SMG1-205ENST00000561947 SEMA4CQ9C0C4 833 aa8.92□□□□□ -0.98
SMG1-205ENST00000561947 PPIL3Q9H2H8 161 aaKnown RBP8.92□□□□□ -0.98
SMG1-205ENST00000561947 SYNDIG1Q9H7V2 258 aa8.92□□□□□ -0.98
SMG1-205ENST00000561947 MARCH7Q9H992 704 aa8.92□□□□□ -0.98
SMG1-205ENST00000561947 RPRD1BQ9NQG5 326 aaKnown RBP8.92□□□□□ -0.98
SMG1-205ENST00000561947 PRMT8Q9NR22 394 aaPredicted RBP8.92□□□□□ -0.98
SMG1-205ENST00000561947 NCDNQ9UBB6 729 aa8.92□□□□□ -0.98
SMG1-205ENST00000561947 COPS3Q9UNS2 423 aa8.92□□□□□ -0.98
SMG1-205ENST00000561947 PCDHGB2Q9Y5G2 931 aa8.92□□□□□ -0.98
SMG1-205ENST00000561947 PCNX3Q9H6A9 2034 aa8.92□□□□□ -0.98
SMG1-205ENST00000561947 TRAV36DV7A0A075B6V5 113 aa8.91□□□□□ -0.98
SMG1-205ENST00000561947 C4orf47A7E2U8 309 aa8.91□□□□□ -0.98
SMG1-205ENST00000561947 IDSB3KWA1 339 aa8.91□□□□□ -0.98
SMG1-205ENST00000561947 MAGEB4O15481 346 aaPredicted RBP8.91□□□□□ -0.98
SMG1-205ENST00000561947 PDGFBP01127 241 aaPredicted RBP8.91□□□□□ -0.98
SMG1-205ENST00000561947 HIST1H2ABP04908 130 aa8.91□□□□□ -0.98
SMG1-205ENST00000561947 F13BP05160 661 aa8.91□□□□□ -0.98
SMG1-205ENST00000561947 CSF3P09919 207 aa8.91□□□□□ -0.98
SMG1-205ENST00000561947 MYL9P24844 172 aa8.91□□□□□ -0.98
SMG1-205ENST00000561947 RPS5P46782 204 aaKnown RBP8.91□□□□□ -0.98
SMG1-205ENST00000561947 P2RX1P51575 399 aa8.91□□□□□ -0.98
SMG1-205ENST00000561947 SCN1BQ07699 218 aa8.91□□□□□ -0.98
SMG1-205ENST00000561947 CD300CQ08708 224 aa8.91□□□□□ -0.98
SMG1-205ENST00000561947 PYDC2Q56P42 97 aa8.91□□□□□ -0.98
SMG1-205ENST00000561947 EMC4Q5J8M3 183 aa8.91□□□□□ -0.98
SMG1-205ENST00000561947 FAM27D1Q5T7N8 215 aa8.91□□□□□ -0.98
SMG1-205ENST00000561947 HBMQ6B0K9 141 aa8.91□□□□□ -0.98
SMG1-205ENST00000561947 PWWP2BQ6NUJ5 590 aa8.91□□□□□ -0.98
SMG1-205ENST00000561947 HIST3H2AQ7L7L0 130 aa8.91□□□□□ -0.98
SMG1-205ENST00000561947 NR2C2APQ86WQ0 139 aa8.91□□□□□ -0.98
SMG1-205ENST00000561947 NFAM1Q8NET5 270 aaPredicted RBP8.91□□□□□ -0.98
SMG1-205ENST00000561947 SNX33Q8WV41 574 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms