RNA–Protein interactions for RNA: ENST00000561009.5

IRF9-212, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-212ENST00000561009 ZIC4Q8N9L1 334 aa10.04□□□□□ -0.8
IRF9-212ENST00000561009 MIPOL1Q8TD10 442 aa10.04□□□□□ -0.8
IRF9-212ENST00000561009 CNOT9Q92600 299 aaKnown RBP10.04□□□□□ -0.8
IRF9-212ENST00000561009 BCL2L2Q92843 193 aaPredicted RBP10.04□□□□□ -0.8
IRF9-212ENST00000561009 RAB8BQ92930 207 aa10.04□□□□□ -0.8
IRF9-212ENST00000561009 SUCNR1Q9BXA5 334 aa10.04□□□□□ -0.8
IRF9-212ENST00000561009 DPY30Q9C005 99 aa10.04□□□□□ -0.8
IRF9-212ENST00000561009 CRLF2Q9HC73 371 aa10.04□□□□□ -0.8
IRF9-212ENST00000561009 FREM1Q5H8C1 2179 aa10.04□□□□□ -0.8
IRF9-212ENST00000561009 TRAV20A0A0B4J274 112 aa10.03□□□□□ -0.8
IRF9-212ENST00000561009 ZC3H12DA2A288 527 aaKnown RBP10.03□□□□□ -0.8
IRF9-212ENST00000561009 LIPT2A6NK58 231 aa10.03□□□□□ -0.8
IRF9-212ENST00000561009 CLDN24A6NM45 220 aa10.03□□□□□ -0.8
IRF9-212ENST00000561009 LYNX1G3V0Z9 82 aa10.03□□□□□ -0.8
IRF9-212ENST00000561009 FAAHO00519 579 aa10.03□□□□□ -0.8
IRF9-212ENST00000561009 RNASET2O00584 256 aaKnown RBP10.03□□□□□ -0.8
IRF9-212ENST00000561009 AP3D1O14617 1153 aa10.03□□□□□ -0.8
IRF9-212ENST00000561009 SYNGR3O43761 229 aa10.03□□□□□ -0.8
IRF9-212ENST00000561009 NPHS1O60500 1241 aa10.03□□□□□ -0.8
IRF9-212ENST00000561009 BCAS1O75363 584 aaPredicted RBP10.03□□□□□ -0.8
IRF9-212ENST00000561009 CPSF4O95639 269 aaKnown RBP10.03□□□□□ -0.8
IRF9-212ENST00000561009 BCL10O95999 233 aa10.03□□□□□ -0.8
IRF9-212ENST00000561009 PNPP00491 289 aa10.03□□□□□ -0.8
IRF9-212ENST00000561009 CHRNGP07510 517 aa10.03□□□□□ -0.8
IRF9-212ENST00000561009 LYNX1P0DP58 116 aa10.03□□□□□ -0.8
IRF9-212ENST00000561009 G6PDP11413 515 aa10.03□□□□□ -0.8
IRF9-212ENST00000561009 IL7RP16871 459 aa10.03□□□□□ -0.8
IRF9-212ENST00000561009 KRT4P19013 534 aa10.03□□□□□ -0.8
IRF9-212ENST00000561009 ACHEP22303 614 aa10.03□□□□□ -0.8
IRF9-212ENST00000561009 UQCRC2P22695 453 aa10.03□□□□□ -0.8
IRF9-212ENST00000561009 ROR2Q01974 943 aaKnown RBP10.03□□□□□ -0.8
IRF9-212ENST00000561009 POU3F1Q03052 451 aaPredicted RBP10.03□□□□□ -0.8
IRF9-212ENST00000561009 HGFACQ04756 655 aa10.03□□□□□ -0.8
IRF9-212ENST00000561009 PCLAFQ15004 111 aa10.03□□□□□ -0.8
IRF9-212ENST00000561009 UGT3A2Q3SY77 523 aa10.03□□□□□ -0.8
IRF9-212ENST00000561009 XKR7Q5GH72 579 aa10.03□□□□□ -0.8
IRF9-212ENST00000561009 ANXA8L1Q5VT79 327 aa10.03□□□□□ -0.8
IRF9-212ENST00000561009 OR4F3Q6IEY1 312 aa10.03□□□□□ -0.8
IRF9-212ENST00000561009 KRT80Q6KB66 452 aa10.03□□□□□ -0.8
IRF9-212ENST00000561009 CREB3L2Q70SY1 520 aa10.03□□□□□ -0.8
IRF9-212ENST00000561009 HMGN2P46Q86SG4 172 aa10.03□□□□□ -0.8
IRF9-212ENST00000561009 RIMKLAQ8IXN7 391 aa10.03□□□□□ -0.8
IRF9-212ENST00000561009 CCDC36Q8IYA8 594 aa10.03□□□□□ -0.8
IRF9-212ENST00000561009 ZNF440Q8IYI8 595 aa10.03□□□□□ -0.8
IRF9-212ENST00000561009 CDK20Q8IZL9 346 aa10.03□□□□□ -0.8
IRF9-212ENST00000561009 GPR137CQ8N3F9 429 aa10.03□□□□□ -0.8
IRF9-212ENST00000561009 NOA1Q8NC60 698 aaKnown RBP10.03□□□□□ -0.8
IRF9-212ENST00000561009 CLDND2Q8NHS1 167 aa10.03□□□□□ -0.8
IRF9-212ENST00000561009 LINC00470Q9BZP3 86 aa10.03□□□□□ -0.8
IRF9-212ENST00000561009 PPCSQ9HAB8 311 aa10.03□□□□□ -0.8
IRF9-212ENST00000561009 CACYBPQ9HB71 228 aaKnown RBP10.03□□□□□ -0.8
IRF9-212ENST00000561009 NOP53Q9NZM5 478 aaKnown RBP10.03□□□□□ -0.8
IRF9-212ENST00000561009 REV1Q9UBZ9 1251 aa10.03□□□□□ -0.8
IRF9-212ENST00000561009 MARCOQ9UEW3 520 aaPredicted RBP10.03□□□□□ -0.8
IRF9-212ENST00000561009 RASD1Q9Y272 281 aa10.03□□□□□ -0.8
IRF9-212ENST00000561009 IGHV2OR16-5A0A0B4J2B6 119 aa10.02□□□□□ -0.81
IRF9-212ENST00000561009 SMIM23A6NLE4 172 aa10.02□□□□□ -0.81
IRF9-212ENST00000561009 A8MVM7 634 aa10.02□□□□□ -0.81
IRF9-212ENST00000561009 PPIHO43447 177 aaKnown RBP10.02□□□□□ -0.81
IRF9-212ENST00000561009 SLC43A1O75387 559 aa10.02□□□□□ -0.81
IRF9-212ENST00000561009 CHRM4P08173 479 aa10.02□□□□□ -0.81
IRF9-212ENST00000561009 CLDN8P56748 225 aa10.02□□□□□ -0.81
IRF9-212ENST00000561009 TMEM33P57088 247 aa10.02□□□□□ -0.81
IRF9-212ENST00000561009 GKAP1Q5VSY0 366 aaPredicted RBP10.02□□□□□ -0.81
IRF9-212ENST00000561009 ZCCHC23Q6ZST2 131 aa10.02□□□□□ -0.81
IRF9-212ENST00000561009 GSPT2Q8IYD1 628 aaKnown RBP10.02□□□□□ -0.81
IRF9-212ENST00000561009 C4orf33Q8N1A6 199 aa10.02□□□□□ -0.81
IRF9-212ENST00000561009 C17orf53Q8N3J3 647 aaPredicted RBP10.02□□□□□ -0.81
IRF9-212ENST00000561009 CADM2Q8N3J6 435 aa10.02□□□□□ -0.81
IRF9-212ENST00000561009 BPIFB2Q8N4F0 458 aa10.02□□□□□ -0.81
IRF9-212ENST00000561009 ANKK1Q8NFD2 765 aa10.02□□□□□ -0.81
IRF9-212ENST00000561009 MGARPQ8TDB4 240 aa10.02□□□□□ -0.81
IRF9-212ENST00000561009 RDH5Q92781 318 aa10.02□□□□□ -0.81
IRF9-212ENST00000561009 ZG16BQ96DA0 208 aa10.02□□□□□ -0.81
IRF9-212ENST00000561009 SLC52A3Q9NQ40 469 aa10.02□□□□□ -0.81
IRF9-212ENST00000561009 PRDM4Q9UKN5 801 aa10.02□□□□□ -0.81
IRF9-212ENST00000561009 YLPM1P49750 1951 aaKnown RBP10.01□□□□□ -0.81
IRF9-212ENST00000561009 MALRD1Q5VYJ5 2156 aa10.01□□□□□ -0.81
IRF9-212ENST00000561009 PRSS51A0A1B0GVH4 220 aa10.01□□□□□ -0.81
IRF9-212ENST00000561009 TMEM129A0AVI4 362 aa10.01□□□□□ -0.81
IRF9-212ENST00000561009 AKAP8O43823 692 aaKnown RBP10.01□□□□□ -0.81
IRF9-212ENST00000561009 UPK3AO75631 287 aa10.01□□□□□ -0.81
IRF9-212ENST00000561009 AHSA1O95433 338 aa10.01□□□□□ -0.81
IRF9-212ENST00000561009 DBIP07108 87 aaKnown RBP10.01□□□□□ -0.81
IRF9-212ENST00000561009 CELA3BP08861 270 aa10.01□□□□□ -0.81
IRF9-212ENST00000561009 GAAP10253 952 aa10.01□□□□□ -0.81
IRF9-212ENST00000561009 ZNF43P17038 809 aa10.01□□□□□ -0.81
IRF9-212ENST00000561009 NCF2P19878 526 aaPredicted RBP10.01□□□□□ -0.81
IRF9-212ENST00000561009 LSP1P33241 339 aa10.01□□□□□ -0.81
IRF9-212ENST00000561009 EVX1P49640 407 aa10.01□□□□□ -0.81
IRF9-212ENST00000561009 RPS23P62266 143 aaKnown RBP10.01□□□□□ -0.81
IRF9-212ENST00000561009 ARF1P84077 181 aaKnown RBP10.01□□□□□ -0.81
IRF9-212ENST00000561009 MYBPC1Q00872 1141 aa10.01□□□□□ -0.81
IRF9-212ENST00000561009 GALK2Q01415 458 aa10.01□□□□□ -0.81
IRF9-212ENST00000561009 EPS8Q12929 822 aa10.01□□□□□ -0.81
IRF9-212ENST00000561009 TRMT5Q32P41 509 aaKnown RBP10.01□□□□□ -0.81
IRF9-212ENST00000561009 AWAT1Q58HT5 328 aa10.01□□□□□ -0.81
IRF9-212ENST00000561009 PRR31Q5SQ13 230 aa10.01□□□□□ -0.81
IRF9-212ENST00000561009 AP1ARQ63HQ0 302 aa10.01□□□□□ -0.81
IRF9-212ENST00000561009 SHISA2Q6UWI4 295 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms