RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 ZNRF4Q8WWF5 429 aa15.15■□□□□ 0.02
TPM1-228ENST00000560975 MOAP1Q96BY2 351 aa15.15■□□□□ 0.02
TPM1-228ENST00000560975 CMTM3Q96MX0 182 aa15.15■□□□□ 0.02
TPM1-228ENST00000560975 CNN2Q99439 309 aaKnown RBP15.15■□□□□ 0.02
TPM1-228ENST00000560975 CMSS1Q9BQ75 279 aaKnown RBP15.15■□□□□ 0.02
TPM1-228ENST00000560975 ZNF471Q9BX82 626 aaPredicted RBP15.15■□□□□ 0.02
TPM1-228ENST00000560975 EXO5Q9H790 373 aa15.15■□□□□ 0.02
TPM1-228ENST00000560975 MEPEQ9NQ76 525 aaPredicted RBP15.15■□□□□ 0.02
TPM1-228ENST00000560975 TRAV14DV4A0A0A6YYC5 116 aa15.14■□□□□ 0.01
TPM1-228ENST00000560975 A0A1B0GVT2 93 aa15.14■□□□□ 0.01
TPM1-228ENST00000560975 SULT1B1O43704 296 aa15.14■□□□□ 0.01
TPM1-228ENST00000560975 RPP14O95059 124 aaKnown RBP15.14■□□□□ 0.01
TPM1-228ENST00000560975 F12P00748 615 aaPredicted RBP15.14■□□□□ 0.01
TPM1-228ENST00000560975 UBBP0CG47 229 aa15.14■□□□□ 0.01
TPM1-228ENST00000560975 UBCP0CG48 685 aaKnown RBP15.14■□□□□ 0.01
TPM1-228ENST00000560975 LAMP2P13473 410 aa15.14■□□□□ 0.01
TPM1-228ENST00000560975 RPS27AP62979 156 aaKnown RBP15.14■□□□□ 0.01
TPM1-228ENST00000560975 UBA52P62987 128 aaKnown RBP15.14■□□□□ 0.01
TPM1-228ENST00000560975 MRPL2Q5T653 305 aaKnown RBP15.14■□□□□ 0.01
TPM1-228ENST00000560975 SLC48A1Q6P1K1 146 aa15.14■□□□□ 0.01
TPM1-228ENST00000560975 RAB11FIP2Q7L804 512 aa15.14■□□□□ 0.01
TPM1-228ENST00000560975 TMCO2Q7Z6W1 182 aaPredicted RBP15.14■□□□□ 0.01
TPM1-228ENST00000560975 AMZ2Q86W34 360 aa15.14■□□□□ 0.01
TPM1-228ENST00000560975 OR4N5Q8IXE1 308 aa15.14■□□□□ 0.01
TPM1-228ENST00000560975 ING5Q8WYH8 240 aa15.14■□□□□ 0.01
TPM1-228ENST00000560975 FBXO34Q9NWN3 711 aa15.14■□□□□ 0.01
TPM1-228ENST00000560975 CTSFQ9UBX1 484 aa15.14■□□□□ 0.01
TPM1-228ENST00000560975 MED31Q9Y3C7 131 aa15.14■□□□□ 0.01
TPM1-228ENST00000560975 ZNF780BQ9Y6R6 833 aa15.14■□□□□ 0.01
TPM1-228ENST00000560975 PEX12O00623 359 aa15.14■□□□□ 0.01
TPM1-228ENST00000560975 GNB5O14775 395 aa15.14■□□□□ 0.01
TPM1-228ENST00000560975 GTF2F2P13984 249 aa15.14■□□□□ 0.01
TPM1-228ENST00000560975 MGMTP16455 207 aa15.14■□□□□ 0.01
TPM1-228ENST00000560975 KCNJ3P48549 501 aa15.14■□□□□ 0.01
TPM1-228ENST00000560975 MECP2P51608 486 aaKnown RBP15.14■□□□□ 0.01
TPM1-228ENST00000560975 SLC7A9P82251 487 aa15.14■□□□□ 0.01
TPM1-228ENST00000560975 NCDNQ9UBB6 729 aa15.14■□□□□ 0.01
TPM1-228ENST00000560975 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.14■□□□□ 0.01
TPM1-228ENST00000560975 RFPL4AA6NLU0 287 aa15.14■□□□□ 0.01
TPM1-228ENST00000560975 FAM171A2A8MVW0 826 aa15.14■□□□□ 0.01
TPM1-228ENST00000560975 RFPL4AL1F8VTS6 287 aa15.14■□□□□ 0.01
TPM1-228ENST00000560975 CLEC3AO75596 197 aa15.14■□□□□ 0.01
TPM1-228ENST00000560975 FAUP35544 74 aaKnown RBP15.14■□□□□ 0.01
TPM1-228ENST00000560975 NANOS3P60323 173 aaKnown RBP15.14■□□□□ 0.01
TPM1-228ENST00000560975 ACTA2P62736 377 aa15.14■□□□□ 0.01
TPM1-228ENST00000560975 ACTG2P63267 376 aa15.14■□□□□ 0.01
TPM1-228ENST00000560975 DUSP5Q16690 384 aa15.14■□□□□ 0.01
TPM1-228ENST00000560975 MANEAQ5SRI9 462 aa15.14■□□□□ 0.01
TPM1-228ENST00000560975 OR2W3Q7Z3T1 314 aa15.14■□□□□ 0.01
TPM1-228ENST00000560975 TMPRSS12Q86WS5 348 aa15.14■□□□□ 0.01
TPM1-228ENST00000560975 NRSN1Q8IZ57 195 aa15.14■□□□□ 0.01
TPM1-228ENST00000560975 OR6K6Q8NGW6 343 aa15.14■□□□□ 0.01
TPM1-228ENST00000560975 OR5K2Q8NHB8 316 aa15.14■□□□□ 0.01
TPM1-228ENST00000560975 MS4A6EQ96DS6 147 aa15.14■□□□□ 0.01
TPM1-228ENST00000560975 PRDM7Q9NQW5 492 aa15.14■□□□□ 0.01
TPM1-228ENST00000560975 ASF1BQ9NVP2 202 aa15.14■□□□□ 0.01
TPM1-228ENST00000560975 CES1P1Q9UKY3 287 aa15.14■□□□□ 0.01
TPM1-228ENST00000560975 KCNK7Q9Y2U2 307 aa15.14■□□□□ 0.01
TPM1-228ENST00000560975 APOC1P02654 83 aa15.13■□□□□ 0.01
TPM1-228ENST00000560975 GP1BAP07359 652 aa15.13■□□□□ 0.01
TPM1-228ENST00000560975 RAB40ALP0C0E4 278 aa15.13■□□□□ 0.01
TPM1-228ENST00000560975 HIST1H1CP16403 213 aaKnown RBP15.13■□□□□ 0.01
TPM1-228ENST00000560975 EEF1A1P68104 462 aaKnown RBP15.13■□□□□ 0.01
TPM1-228ENST00000560975 MFSD12Q6NUT3 480 aa15.13■□□□□ 0.01
TPM1-228ENST00000560975 UNQ9370/PRO34162Q6UXP9 181 aa15.13■□□□□ 0.01
TPM1-228ENST00000560975 MOB3CQ70IA8 216 aa15.13■□□□□ 0.01
TPM1-228ENST00000560975 TMED4Q7Z7H5 227 aa15.13■□□□□ 0.01
TPM1-228ENST00000560975 OR1S2Q8NGQ3 325 aa15.13■□□□□ 0.01
TPM1-228ENST00000560975 RAB40AQ8WXH6 277 aa15.13■□□□□ 0.01
TPM1-228ENST00000560975 RGP1Q92546 391 aaPredicted RBP15.13■□□□□ 0.01
TPM1-228ENST00000560975 MRGPRX3Q96LB0 322 aa15.13■□□□□ 0.01
TPM1-228ENST00000560975 SLC19A3Q9BZV2 496 aa15.13■□□□□ 0.01
TPM1-228ENST00000560975 TCF7L1Q9HCS4 588 aa15.13■□□□□ 0.01
TPM1-228ENST00000560975 EDARQ9UNE0 448 aa15.13■□□□□ 0.01
TPM1-228ENST00000560975 CACNA1CQ13936 2221 aa15.13■□□□□ 0.01
TPM1-228ENST00000560975 C17orf113A0A1B0GUU1 675 aa15.13■□□□□ 0.01
TPM1-228ENST00000560975 ZFPL1O95159 310 aa15.13■□□□□ 0.01
TPM1-228ENST00000560975 OR2T7P0C7T2 308 aa15.13■□□□□ 0.01
TPM1-228ENST00000560975 C6P13671 934 aa15.13■□□□□ 0.01
TPM1-228ENST00000560975 HOXB1P14653 301 aaPredicted RBP15.13■□□□□ 0.01
TPM1-228ENST00000560975 SELPP16109 830 aa15.13■□□□□ 0.01
TPM1-228ENST00000560975 MRPS10P82664 201 aaKnown RBP15.13■□□□□ 0.01
TPM1-228ENST00000560975 AMZ1Q400G9 498 aa15.13■□□□□ 0.01
TPM1-228ENST00000560975 ABHD17CQ6PCB6 329 aa15.13■□□□□ 0.01
TPM1-228ENST00000560975 BEST3Q8N1M1 668 aa15.13■□□□□ 0.01
TPM1-228ENST00000560975 OR2T27Q8NH04 317 aa15.13■□□□□ 0.01
TPM1-228ENST00000560975 MIB2Q96AX9 1013 aa15.13■□□□□ 0.01
TPM1-228ENST00000560975 MS4A4EQ96PG1 132 aa15.13■□□□□ 0.01
TPM1-228ENST00000560975 BIN3Q9NQY0 253 aa15.13■□□□□ 0.01
TPM1-228ENST00000560975 HAO2Q9NYQ3 351 aa15.13■□□□□ 0.01
TPM1-228ENST00000560975 KIAA1549LQ6ZVL6 1849 aa15.12■□□□□ 0.01
TPM1-228ENST00000560975 TBC1D3EA0A087X179 549 aa15.12■□□□□ 0.01
TPM1-228ENST00000560975 KANTRA0A1W2PQU2 76 aa15.12■□□□□ 0.01
TPM1-228ENST00000560975 TSPAN11A1L157 253 aa15.12■□□□□ 0.01
TPM1-228ENST00000560975 LINC00587B1AMM8 73 aa15.12■□□□□ 0.01
TPM1-228ENST00000560975 SPINT1O43278 529 aa15.12■□□□□ 0.01
TPM1-228ENST00000560975 EIF4E2O60573 245 aaKnown RBP15.12■□□□□ 0.01
TPM1-228ENST00000560975 IFNGP01579 166 aa15.12■□□□□ 0.01
TPM1-228ENST00000560975 MAS1P04201 325 aa15.12■□□□□ 0.01
TPM1-228ENST00000560975 RPN2P04844 631 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms