RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 SH3PXD2BA1X283 911 aa15.99■□□□□ 0.15
TPM1-226ENST00000560959 TMEM229AB2RXF0 380 aa15.99■□□□□ 0.15
TPM1-226ENST00000560959 AP3D1O14617 1153 aa15.99■□□□□ 0.15
TPM1-226ENST00000560959 SYNGR3O43761 229 aa15.99■□□□□ 0.15
TPM1-226ENST00000560959 SELENOPP49908 381 aa15.99■□□□□ 0.15
TPM1-226ENST00000560959 MRPS11P82912 194 aaKnown RBP15.99■□□□□ 0.15
TPM1-226ENST00000560959 MAD2L1Q13257 205 aaPredicted RBP15.99■□□□□ 0.15
TPM1-226ENST00000560959 REP15Q6BDI9 236 aa15.99■□□□□ 0.15
TPM1-226ENST00000560959 LINGO2Q7L985 606 aa15.99■□□□□ 0.15
TPM1-226ENST00000560959 CDK20Q8IZL9 346 aa15.99■□□□□ 0.15
TPM1-226ENST00000560959 MNS1Q8NEH6 495 aa15.99■□□□□ 0.15
TPM1-226ENST00000560959 OR51F2Q8NH61 342 aa15.99■□□□□ 0.15
TPM1-226ENST00000560959 RAB8BQ92930 207 aa15.99■□□□□ 0.15
TPM1-226ENST00000560959 ALKBH3Q96Q83 286 aaPredicted RBP15.99■□□□□ 0.15
TPM1-226ENST00000560959 LRRC37BQ96QE4 947 aa15.99■□□□□ 0.15
TPM1-226ENST00000560959 TAPBPLQ9BX59 468 aa15.99■□□□□ 0.15
TPM1-226ENST00000560959 TXLNGYQ9BZA5 131 aa15.99■□□□□ 0.15
TPM1-226ENST00000560959 PPCSQ9HAB8 311 aa15.99■□□□□ 0.15
TPM1-226ENST00000560959 RASD1Q9Y272 281 aa15.99■□□□□ 0.15
TPM1-226ENST00000560959 TRRAPQ9Y4A5 3859 aa15.98■□□□□ 0.15
TPM1-226ENST00000560959 A0A096LPE4 126 aa15.98■□□□□ 0.15
TPM1-226ENST00000560959 TRAV20A0A0B4J274 112 aa15.98■□□□□ 0.15
TPM1-226ENST00000560959 A0A1W2PPZ6 126 aa15.98■□□□□ 0.15
TPM1-226ENST00000560959 CFAP73A6NFT4 308 aa15.98■□□□□ 0.15
TPM1-226ENST00000560959 AGAP5A6NIR3 686 aa15.98■□□□□ 0.15
TPM1-226ENST00000560959 LYNX1G3V0Z9 82 aa15.98■□□□□ 0.15
TPM1-226ENST00000560959 UPK3AO75631 287 aa15.98■□□□□ 0.15
TPM1-226ENST00000560959 LYNX1P0DP58 116 aa15.98■□□□□ 0.15
TPM1-226ENST00000560959 G6PDP11413 515 aa15.98■□□□□ 0.15
TPM1-226ENST00000560959 ANPEPP15144 967 aa15.98■□□□□ 0.15
TPM1-226ENST00000560959 ACHEP22303 614 aa15.98■□□□□ 0.15
TPM1-226ENST00000560959 CXCR1P25024 350 aa15.98■□□□□ 0.15
TPM1-226ENST00000560959 GPR6P46095 362 aaPredicted RBP15.98■□□□□ 0.15
TPM1-226ENST00000560959 TUBA1BP68363 451 aa15.98■□□□□ 0.15
TPM1-226ENST00000560959 TUBA4AP68366 448 aa15.98■□□□□ 0.15
TPM1-226ENST00000560959 HPCAP84074 193 aa15.98■□□□□ 0.15
TPM1-226ENST00000560959 EPS8Q12929 822 aa15.98■□□□□ 0.15
TPM1-226ENST00000560959 DAG1Q14118 895 aa15.98■□□□□ 0.15
TPM1-226ENST00000560959 GNA13Q14344 377 aa15.98■□□□□ 0.15
TPM1-226ENST00000560959 SMU1Q2TAY7 513 aa15.98■□□□□ 0.15
TPM1-226ENST00000560959 ELFN2Q5R3F8 820 aa15.98■□□□□ 0.15
TPM1-226ENST00000560959 SAXO2Q658L1 398 aa15.98■□□□□ 0.15
TPM1-226ENST00000560959 OR4F3Q6IEY1 312 aa15.98■□□□□ 0.15
TPM1-226ENST00000560959 TNFAIP8L2Q6P589 184 aaPredicted RBP15.98■□□□□ 0.15
TPM1-226ENST00000560959 TUBA1AQ71U36 451 aa15.98■□□□□ 0.15
TPM1-226ENST00000560959 EPHX4Q8IUS5 362 aa15.98■□□□□ 0.15
TPM1-226ENST00000560959 ZNF440Q8IYI8 595 aa15.98■□□□□ 0.15
TPM1-226ENST00000560959 OR4A15Q8NGL6 344 aa15.98■□□□□ 0.15
TPM1-226ENST00000560959 RDH5Q92781 318 aa15.98■□□□□ 0.15
TPM1-226ENST00000560959 NEURL3Q96EH8 262 aa15.98■□□□□ 0.15
TPM1-226ENST00000560959 TRNT1Q96Q11 434 aaKnown RBP15.98■□□□□ 0.15
TPM1-226ENST00000560959 MTHFD2LQ9H903 347 aaPredicted RBP15.98■□□□□ 0.15
TPM1-226ENST00000560959 ASIC5Q9NY37 505 aa15.98■□□□□ 0.15
TPM1-226ENST00000560959 REV1Q9UBZ9 1251 aa15.98■□□□□ 0.15
TPM1-226ENST00000560959 PRSS51A0A1B0GVH4 220 aa15.97■□□□□ 0.15
TPM1-226ENST00000560959 PRAMEF27A3QJZ7 478 aa15.97■□□□□ 0.15
TPM1-226ENST00000560959 SCN2BO60939 215 aa15.97■□□□□ 0.15
TPM1-226ENST00000560959 SKAP2O75563 359 aaPredicted RBP15.97■□□□□ 0.15
TPM1-226ENST00000560959 CELA3BP08861 270 aa15.97■□□□□ 0.15
TPM1-226ENST00000560959 GAAP10253 952 aa15.97■□□□□ 0.15
TPM1-226ENST00000560959 SAGP10523 405 aaPredicted RBP15.97■□□□□ 0.15
TPM1-226ENST00000560959 CREB1P16220 341 aa15.97■□□□□ 0.15
TPM1-226ENST00000560959 KRT4P19013 534 aa15.97■□□□□ 0.15
TPM1-226ENST00000560959 EPHA1P21709 976 aa15.97■□□□□ 0.15
TPM1-226ENST00000560959 NR4A1P22736 598 aa15.97■□□□□ 0.15
TPM1-226ENST00000560959 SERPINB5P36952 375 aa15.97■□□□□ 0.15
TPM1-226ENST00000560959 TXNL4AP83876 142 aaKnown RBP15.97■□□□□ 0.15
TPM1-226ENST00000560959 ROR2Q01974 943 aaKnown RBP15.97■□□□□ 0.15
TPM1-226ENST00000560959 EMX2Q04743 252 aa15.97■□□□□ 0.15
TPM1-226ENST00000560959 GPAT3Q53EU6 434 aa15.97■□□□□ 0.15
TPM1-226ENST00000560959 PDLIM3Q53GG5 364 aaPredicted RBP15.97■□□□□ 0.15
TPM1-226ENST00000560959 AWAT1Q58HT5 328 aa15.97■□□□□ 0.15
TPM1-226ENST00000560959 NIPAL3Q6P499 406 aa15.97■□□□□ 0.15
TPM1-226ENST00000560959 VPS37AQ8NEZ2 397 aa15.97■□□□□ 0.15
TPM1-226ENST00000560959 MRPL24Q96A35 216 aaKnown RBP15.97■□□□□ 0.15
TPM1-226ENST00000560959 ZNF747Q9BV97 191 aa15.97■□□□□ 0.15
TPM1-226ENST00000560959 A8MVM7 634 aa15.96■□□□□ 0.15
TPM1-226ENST00000560959 PNPP00491 289 aa15.96■□□□□ 0.15
TPM1-226ENST00000560959 RPS4Y1P22090 263 aaKnown RBP15.96■□□□□ 0.15
TPM1-226ENST00000560959 LMO4P61968 165 aa15.96■□□□□ 0.15
TPM1-226ENST00000560959 ANXA8L1Q5VT79 327 aa15.96■□□□□ 0.15
TPM1-226ENST00000560959 FAHD2BQ6P2I3 314 aaPredicted RBP15.96■□□□□ 0.15
TPM1-226ENST00000560959 MYPOPQ86VE0 399 aaPredicted RBP15.96■□□□□ 0.15
TPM1-226ENST00000560959 IFT20Q8IY31 132 aa15.96■□□□□ 0.15
TPM1-226ENST00000560959 ANP32BQ92688 251 aaKnown RBP15.96■□□□□ 0.15
TPM1-226ENST00000560959 TUBGCP3Q96CW5 907 aa15.96■□□□□ 0.15
TPM1-226ENST00000560959 FAHD2AQ96GK7 314 aa15.96■□□□□ 0.15
TPM1-226ENST00000560959 SUCNR1Q9BXA5 334 aa15.96■□□□□ 0.15
TPM1-226ENST00000560959 SLC38A1Q9H2H9 487 aa15.96■□□□□ 0.15
TPM1-226ENST00000560959 TPK1Q9H3S4 243 aa15.96■□□□□ 0.15
TPM1-226ENST00000560959 NOX3Q9HBY0 568 aa15.96■□□□□ 0.15
TPM1-226ENST00000560959 NOP53Q9NZM5 478 aaKnown RBP15.96■□□□□ 0.15
TPM1-226ENST00000560959 RCE1Q9Y256 329 aa15.96■□□□□ 0.15
TPM1-226ENST00000560959 A0A096LPI6 279 aa15.95■□□□□ 0.14
TPM1-226ENST00000560959 M0R233 179 aa15.95■□□□□ 0.14
TPM1-226ENST00000560959 HMGN4O00479 90 aa15.95■□□□□ 0.14
TPM1-226ENST00000560959 TMPRSS2O15393 492 aa15.95■□□□□ 0.14
TPM1-226ENST00000560959 ZNF432O94892 652 aa15.95■□□□□ 0.14
TPM1-226ENST00000560959 GSNP06396 782 aa15.95■□□□□ 0.14
TPM1-226ENST00000560959 TFPTP0C1Z6 253 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms