RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 RNASE11Q8TAA1 199 aaKnown RBP6.17□□□□□ -1.42
TSPAN3-209ENST00000560715 C14orf144Q96I85 54 aa6.17□□□□□ -1.42
TSPAN3-209ENST00000560715 SSX3Q99909 188 aa6.17□□□□□ -1.42
TSPAN3-209ENST00000560715 FBXO44Q9H4M3 255 aa6.17□□□□□ -1.42
TSPAN3-209ENST00000560715 TXNL4BQ9NX01 149 aaKnown RBP6.17□□□□□ -1.42
TSPAN3-209ENST00000560715 DUX4Q9UBX2 424 aa6.17□□□□□ -1.42
TSPAN3-209ENST00000560715 Q9UFV3 132 aa6.17□□□□□ -1.42
TSPAN3-209ENST00000560715 LSM2Q9Y333 95 aaKnown RBP6.17□□□□□ -1.42
TSPAN3-209ENST00000560715 NUBP2Q9Y5Y2 271 aa6.17□□□□□ -1.42
TSPAN3-209ENST00000560715 OR6C75A6NL08 312 aa6.17□□□□□ -1.42
TSPAN3-209ENST00000560715 FAM220BPB1ANY3 271 aa6.17□□□□□ -1.42
TSPAN3-209ENST00000560715 OGG1O15527 345 aa6.17□□□□□ -1.42
TSPAN3-209ENST00000560715 TPST2O60704 377 aa6.17□□□□□ -1.42
TSPAN3-209ENST00000560715 SIX6O95475 246 aa6.17□□□□□ -1.42
TSPAN3-209ENST00000560715 CBR1P16152 277 aa6.17□□□□□ -1.42
TSPAN3-209ENST00000560715 CYP2B6P20813 491 aa6.17□□□□□ -1.42
TSPAN3-209ENST00000560715 BTCP35070 178 aa6.17□□□□□ -1.42
TSPAN3-209ENST00000560715 SLC1A3P43003 542 aa6.17□□□□□ -1.42
TSPAN3-209ENST00000560715 AGTR2P50052 363 aa6.17□□□□□ -1.42
TSPAN3-209ENST00000560715 ZP1P60852 638 aa6.17□□□□□ -1.42
TSPAN3-209ENST00000560715 RAB5BP61020 215 aa6.17□□□□□ -1.42
TSPAN3-209ENST00000560715 FUT7Q11130 342 aa6.17□□□□□ -1.42
TSPAN3-209ENST00000560715 GAB1Q13480 694 aa6.17□□□□□ -1.42
TSPAN3-209ENST00000560715 GRB14Q14449 540 aa6.17□□□□□ -1.42
TSPAN3-209ENST00000560715 ZNF699Q32M78 642 aa6.17□□□□□ -1.42
TSPAN3-209ENST00000560715 XKR7Q5GH72 579 aa6.17□□□□□ -1.42
TSPAN3-209ENST00000560715 CBLN2Q8IUK8 224 aa6.17□□□□□ -1.42
TSPAN3-209ENST00000560715 SPAG16Q8N0X2 631 aa6.17□□□□□ -1.42
TSPAN3-209ENST00000560715 OR5M9Q8NGP3 310 aa6.17□□□□□ -1.42
TSPAN3-209ENST00000560715 LINGO1Q96FE5 620 aa6.17□□□□□ -1.42
TSPAN3-209ENST00000560715 TECTBQ96PL2 329 aa6.17□□□□□ -1.42
TSPAN3-209ENST00000560715 C16orf70Q9BSU1 422 aa6.17□□□□□ -1.42
TSPAN3-209ENST00000560715 VN1R3Q9BXE9 311 aa6.17□□□□□ -1.42
TSPAN3-209ENST00000560715 CDT1Q9H211 546 aa6.17□□□□□ -1.42
TSPAN3-209ENST00000560715 IKZF5Q9H5V7 419 aa6.17□□□□□ -1.42
TSPAN3-209ENST00000560715 EXO5Q9H790 373 aa6.17□□□□□ -1.42
TSPAN3-209ENST00000560715 METTL17Q9H7H0 456 aaPredicted RBP6.17□□□□□ -1.42
TSPAN3-209ENST00000560715 LSM4Q9Y4Z0 139 aaKnown RBP6.17□□□□□ -1.42
TSPAN3-209ENST00000560715 RALGAPA2Q2PPJ7 1873 aa6.17□□□□□ -1.42
TSPAN3-209ENST00000560715 CLDN4O14493 209 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 B4GALT5O43286 388 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 WIPF1O43516 503 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 RNF13O43567 381 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 MFSD11O43934 449 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 LCMT2O60294 686 aaKnown RBP6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 RP2O75695 350 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 GRAP2O75791 330 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 SNAI1O95863 264 aaPredicted RBP6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 GP1BAP07359 652 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 HOXC4P09017 264 aaPredicted RBP6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 DBHP09172 617 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 FOLR2P14207 255 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 PRDX2P32119 198 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 SLC1A2P43004 574 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 BDKRB1P46663 353 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 CRHR2Q13324 411 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 GK2Q14410 553 aaPredicted RBP6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 HLXQ14774 488 aaPredicted RBP6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 SYPL2Q5VXT5 272 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 TMEM91Q6ZNR0 172 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 KLBQ86Z14 1044 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 C1orf87Q8N0U7 546 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 PUSL1Q8N0Z8 303 aaKnown RBP6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 OR4A15Q8NGL6 344 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 OR10Q1Q8NGQ4 319 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 OR9Q1Q8NGQ5 310 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 HDHD2Q9H0R4 259 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 DPAGT1Q9H3H5 408 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 FAM124BQ9H5Z6 455 aaPredicted RBP6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 ALG9Q9H6U8 611 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 IMP3Q9NV31 184 aaKnown RBP6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 KLHL8Q9P2G9 620 aaPredicted RBP6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 COMMD3Q9UBI1 195 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 MGAT4CQ9UBM8 478 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 SAMD4AQ9UPU9 718 aaKnown RBP6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 ZNF879B4DU55 563 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 DISC1C4P0D8 188 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 GPR31O00270 319 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 PRAF2O60831 178 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 ALDOBP05062 364 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 FABP3P05413 133 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 STAG3L1P0CL83 205 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 UGT2B7P16662 529 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 UQCRC2P22695 453 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 NFYAP23511 347 aaPredicted RBP6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 IDH2P48735 452 aaKnown RBP6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 STK19P49842 368 aaPredicted RBP6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 SELENOPP49908 381 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 RAG2P55895 527 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 ITGA1P56199 1179 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 LOXL3P58215 753 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 SMCO1Q147U7 214 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 SPHARQ15513 63 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 TSNQ15631 228 aaKnown RBP6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 ST3GAL2Q16842 350 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 GSG1Q2KHT4 349 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 SYTL3Q4VX76 610 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 ISCA2Q86U28 154 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 CALHM3Q86XJ0 350 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 OR10S1Q8NGN2 331 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms