RNA–Protein interactions for RNA: ENST00000560708.5

MRPS11-209, Transcript of mitochondrial ribosomal protein S11, humanhuman

TSL 2

Gene MRPS11, Length 1,060 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS11-209ENST00000560708 DEPDC4Q8N2C3 294 aa12.03□□□□□ -0.48
MRPS11-209ENST00000560708 MAL2Q969L2 176 aa12.03□□□□□ -0.48
MRPS11-209ENST00000560708 C3orf49Q96BT1 292 aa12.03□□□□□ -0.48
MRPS11-209ENST00000560708 ZNF317Q96PQ6 595 aaPredicted RBP12.03□□□□□ -0.48
MRPS11-209ENST00000560708 ALKBH3Q96Q83 286 aaPredicted RBP12.03□□□□□ -0.48
MRPS11-209ENST00000560708 SF3B5Q9BWJ5 86 aaKnown RBP12.03□□□□□ -0.48
MRPS11-209ENST00000560708 RABEP2Q9H5N1 569 aa12.03□□□□□ -0.48
MRPS11-209ENST00000560708 FGFR1OP2Q9NVK5 253 aa12.03□□□□□ -0.48
MRPS11-209ENST00000560708 ATP23Q9Y6H3 246 aa12.03□□□□□ -0.48
MRPS11-209ENST00000560708 A0A0G2JND7 137 aa12.02□□□□□ -0.49
MRPS11-209ENST00000560708 FAM234BA2RU67 622 aa12.02□□□□□ -0.49
MRPS11-209ENST00000560708 ATP6V1G2-DDX39BF2Z307 99 aa12.02□□□□□ -0.49
MRPS11-209ENST00000560708 KRT33AO76009 404 aa12.02□□□□□ -0.49
MRPS11-209ENST00000560708 SELENOPP49908 381 aa12.02□□□□□ -0.49
MRPS11-209ENST00000560708 P2RY4P51582 365 aa12.02□□□□□ -0.49
MRPS11-209ENST00000560708 ARFIP2P53365 341 aa12.02□□□□□ -0.49
MRPS11-209ENST00000560708 HOXC5Q00444 222 aa12.02□□□□□ -0.49
MRPS11-209ENST00000560708 LGALS3BPQ08380 585 aa12.02□□□□□ -0.49
MRPS11-209ENST00000560708 ZNF311Q5JNZ3 666 aa12.02□□□□□ -0.49
MRPS11-209ENST00000560708 C1orf140Q5VVS0 124 aa12.02□□□□□ -0.49
MRPS11-209ENST00000560708 PRAMEF8Q5VWM4 474 aa12.02□□□□□ -0.49
MRPS11-209ENST00000560708 PRAMEF7Q5VXH5 474 aa12.02□□□□□ -0.49
MRPS11-209ENST00000560708 TMEM225Q6GV28 225 aa12.02□□□□□ -0.49
MRPS11-209ENST00000560708 POMGNT2Q8NAT1 580 aa12.02□□□□□ -0.49
MRPS11-209ENST00000560708 GTF2H4Q92759 462 aa12.02□□□□□ -0.49
MRPS11-209ENST00000560708 RHNO1Q9BSD3 238 aa12.02□□□□□ -0.49
MRPS11-209ENST00000560708 SPATA9Q9BWV2 254 aa12.02□□□□□ -0.49
MRPS11-209ENST00000560708 TMEM120AQ9BXJ8 343 aa12.02□□□□□ -0.49
MRPS11-209ENST00000560708 PAIP1Q9H074 479 aaKnown RBP12.02□□□□□ -0.49
MRPS11-209ENST00000560708 FKRPQ9H9S5 495 aa12.02□□□□□ -0.49
MRPS11-209ENST00000560708 KLHL14Q9P2G3 628 aa12.02□□□□□ -0.49
MRPS11-209ENST00000560708 PCDHB14Q9Y5E9 798 aa12.02□□□□□ -0.49
MRPS11-209ENST00000560708 SONP18583 2426 aaKnown RBP12.02□□□□□ -0.49
MRPS11-209ENST00000560708 A0A0G2JPF8 293 aa12.01□□□□□ -0.49
MRPS11-209ENST00000560708 TMEM229AB2RXF0 380 aa12.01□□□□□ -0.49
MRPS11-209ENST00000560708 HNRNPCL2B2RXH8 293 aa12.01□□□□□ -0.49
MRPS11-209ENST00000560708 HNRNPCL3B7ZW38 293 aa12.01□□□□□ -0.49
MRPS11-209ENST00000560708 CLIC1O00299 241 aa12.01□□□□□ -0.49
MRPS11-209ENST00000560708 CD5LO43866 347 aa12.01□□□□□ -0.49
MRPS11-209ENST00000560708 HNRNPCL1O60812 293 aaKnown RBP12.01□□□□□ -0.49
MRPS11-209ENST00000560708 AHSA1O95433 338 aa12.01□□□□□ -0.49
MRPS11-209ENST00000560708 LGI1O95970 557 aa12.01□□□□□ -0.49
MRPS11-209ENST00000560708 HNRNPCL4P0DMR1 293 aa12.01□□□□□ -0.49
MRPS11-209ENST00000560708 PRPS1P60891 318 aa12.01□□□□□ -0.49
MRPS11-209ENST00000560708 SQLEQ14534 574 aa12.01□□□□□ -0.49
MRPS11-209ENST00000560708 RAB35Q15286 201 aa12.01□□□□□ -0.49
MRPS11-209ENST00000560708 RGNQ15493 299 aa12.01□□□□□ -0.49
MRPS11-209ENST00000560708 CGB2Q6NT52 195 aa12.01□□□□□ -0.49
MRPS11-209ENST00000560708 ZNF544Q6NX49 715 aa12.01□□□□□ -0.49
MRPS11-209ENST00000560708 NIPAL3Q6P499 406 aa12.01□□□□□ -0.49
MRPS11-209ENST00000560708 CLEC2AQ6UVW9 174 aa12.01□□□□□ -0.49
MRPS11-209ENST00000560708 ZNF525Q8N782 197 aa12.01□□□□□ -0.49
MRPS11-209ENST00000560708 THOC1Q96FV9 657 aaKnown RBP12.01□□□□□ -0.49
MRPS11-209ENST00000560708 ARMC7Q9H6L4 198 aa12.01□□□□□ -0.49
MRPS11-209ENST00000560708 YAE1D1Q9NRH1 226 aa12.01□□□□□ -0.49
MRPS11-209ENST00000560708 THUMPD1Q9NXG2 353 aaKnown RBP12.01□□□□□ -0.49
MRPS11-209ENST00000560708 ZNF232Q9UNY5 417 aa12.01□□□□□ -0.49
MRPS11-209ENST00000560708 MOKQ9UQ07 419 aa12.01□□□□□ -0.49
MRPS11-209ENST00000560708 IFT52Q9Y366 437 aa12.01□□□□□ -0.49
MRPS11-209ENST00000560708 PLCE1Q9P212 2302 aa12.01□□□□□ -0.49
MRPS11-209ENST00000560708 A0A096LNT2 108 aa12□□□□□ -0.49
MRPS11-209ENST00000560708 A0A096LPI6 279 aa12□□□□□ -0.49
MRPS11-209ENST00000560708 C5orf58C9J3I9 102 aa12□□□□□ -0.49
MRPS11-209ENST00000560708 ZNF587BE7ETH6 402 aa12□□□□□ -0.49
MRPS11-209ENST00000560708 GPRIN2O60269 458 aa12□□□□□ -0.49
MRPS11-209ENST00000560708 NPIPB7O75200 414 aa12□□□□□ -0.49
MRPS11-209ENST00000560708 WNT11O96014 354 aa12□□□□□ -0.49
MRPS11-209ENST00000560708 PNMTP11086 282 aa12□□□□□ -0.49
MRPS11-209ENST00000560708 HOXB9P17482 250 aaPredicted RBP12□□□□□ -0.49
MRPS11-209ENST00000560708 RPS5P46782 204 aaKnown RBP12□□□□□ -0.49
MRPS11-209ENST00000560708 FADDQ13158 208 aa12□□□□□ -0.49
MRPS11-209ENST00000560708 ZSWIM7Q19AV6 140 aa12□□□□□ -0.49
MRPS11-209ENST00000560708 TBRG1Q3YBR2 411 aa12□□□□□ -0.49
MRPS11-209ENST00000560708 CREB3L2Q70SY1 520 aa12□□□□□ -0.49
MRPS11-209ENST00000560708 ABHD12BQ7Z5M8 362 aaPredicted RBP12□□□□□ -0.49
MRPS11-209ENST00000560708 KDM8Q8N371 416 aa12□□□□□ -0.49
MRPS11-209ENST00000560708 BBS10Q8TAM1 723 aa12□□□□□ -0.49
MRPS11-209ENST00000560708 SLC25A36Q96CQ1 311 aa12□□□□□ -0.49
MRPS11-209ENST00000560708 PTDSS2Q9BVG9 487 aa12□□□□□ -0.49
MRPS11-209ENST00000560708 ZNF385DQ9H6B1 395 aa12□□□□□ -0.49
MRPS11-209ENST00000560708 A4GALTQ9NPC4 353 aa12□□□□□ -0.49
MRPS11-209ENST00000560708 FAM53CQ9NYF3 392 aa12□□□□□ -0.49
MRPS11-209ENST00000560708 SEC14L4Q9UDX3 406 aa12□□□□□ -0.49
MRPS11-209ENST00000560708 IGHV1-18A0A0C4DH31 117 aa11.99□□□□□ -0.49
MRPS11-209ENST00000560708 ELOA3DA6NLF2 546 aaPredicted RBP11.99□□□□□ -0.49
MRPS11-209ENST00000560708 FTCDNL1E5RQL4 147 aa11.99□□□□□ -0.49
MRPS11-209ENST00000560708 H7C417 338 aa11.99□□□□□ -0.49
MRPS11-209ENST00000560708 NR5A2O00482 541 aa11.99□□□□□ -0.49
MRPS11-209ENST00000560708 TLX2O43763 284 aaPredicted RBP11.99□□□□□ -0.49
MRPS11-209ENST00000560708 UPK3AO75631 287 aa11.99□□□□□ -0.49
MRPS11-209ENST00000560708 LY6HO94772 140 aa11.99□□□□□ -0.49
MRPS11-209ENST00000560708 VAMP5O95183 116 aa11.99□□□□□ -0.49
MRPS11-209ENST00000560708 BMP2P12643 396 aa11.99□□□□□ -0.49
MRPS11-209ENST00000560708 GTF2E2P29084 291 aaKnown RBP11.99□□□□□ -0.49
MRPS11-209ENST00000560708 TUBA1BP68363 451 aa11.99□□□□□ -0.49
MRPS11-209ENST00000560708 TUBA4AP68366 448 aa11.99□□□□□ -0.49
MRPS11-209ENST00000560708 EGR4Q05215 589 aa11.99□□□□□ -0.49
MRPS11-209ENST00000560708 ELOA3BQ3SY89 546 aa11.99□□□□□ -0.49
MRPS11-209ENST00000560708 BLOC1S3Q6QNY0 202 aa11.99□□□□□ -0.49
MRPS11-209ENST00000560708 TUBA1AQ71U36 451 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms