RNA–Protein interactions for RNA: ENST00000560029.5

CRNDE-208, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 659 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-208ENST00000560029 CYYR1Q96J86 154 aa3.3□□□□□ -1.88
CRNDE-208ENST00000560029 ZNF607Q96SK3 696 aa3.3□□□□□ -1.88
CRNDE-208ENST00000560029 ZNF670Q9BS34 389 aa3.3□□□□□ -1.88
CRNDE-208ENST00000560029 NIPSNAP3BQ9BS92 247 aa3.3□□□□□ -1.88
CRNDE-208ENST00000560029 TCHPQ9BT92 498 aa3.3□□□□□ -1.88
CRNDE-208ENST00000560029 UPF3BQ9BZI7 483 aaKnown RBP3.3□□□□□ -1.88
CRNDE-208ENST00000560029 POLR2J2Q9GZM3 115 aaKnown RBP3.3□□□□□ -1.88
CRNDE-208ENST00000560029 POLR2J3Q9H1A7 115 aaKnown RBP3.3□□□□□ -1.88
CRNDE-208ENST00000560029 TMEM165Q9HC07 324 aa3.3□□□□□ -1.88
CRNDE-208ENST00000560029 SLC40A1Q9NP59 571 aa3.3□□□□□ -1.88
CRNDE-208ENST00000560029 AATFQ9NY61 560 aaKnown RBP eCLIP3.3□□□□□ -1.88
CRNDE-208ENST00000560029 TREM2Q9NZC2 230 aa3.3□□□□□ -1.88
CRNDE-208ENST00000560029 PCSK1NQ9UHG2 260 aa3.3□□□□□ -1.88
CRNDE-208ENST00000560029 BTNL2Q9UIR0 455 aa3.3□□□□□ -1.88
CRNDE-208ENST00000560029 RPH3ALQ9UNE2 315 aa3.3□□□□□ -1.88
CRNDE-208ENST00000560029 MEMO1Q9Y316 297 aa3.3□□□□□ -1.88
CRNDE-208ENST00000560029 LRRIQ1Q96JM4 1722 aa3.3□□□□□ -1.88
CRNDE-208ENST00000560029 THSD7BQ9C0I4 1608 aa3.3□□□□□ -1.88
CRNDE-208ENST00000560029 WDR62O43379 1518 aa3.29□□□□□ -1.88
CRNDE-208ENST00000560029 ADGRL1O94910 1474 aa3.29□□□□□ -1.88
CRNDE-208ENST00000560029 GRIN2BQ13224 1484 aa3.29□□□□□ -1.88
CRNDE-208ENST00000560029 IQSEC2Q5JU85 1478 aa3.29□□□□□ -1.88
CRNDE-208ENST00000560029 FAM135BQ49AJ0 1406 aa3.29□□□□□ -1.88
CRNDE-208ENST00000560029 PDS5BQ9NTI5 1447 aa3.29□□□□□ -1.88
CRNDE-208ENST00000560029 MBLAC1A4D2B0 266 aaPredicted RBP3.29□□□□□ -1.88
CRNDE-208ENST00000560029 CTAGE15A4D2H0 777 aa3.29□□□□□ -1.88
CRNDE-208ENST00000560029 METTL21EPA6NDL7 271 aa3.29□□□□□ -1.88
CRNDE-208ENST00000560029 PRRG1O14668 218 aa3.29□□□□□ -1.88
CRNDE-208ENST00000560029 EIF3HO15372 352 aaKnown RBP eCLIP3.29□□□□□ -1.88
CRNDE-208ENST00000560029 CXCL13O43927 109 aa3.29□□□□□ -1.88
CRNDE-208ENST00000560029 ZNF780AO75290 641 aaPredicted RBP3.29□□□□□ -1.88
CRNDE-208ENST00000560029 SNAPINO95295 136 aa3.29□□□□□ -1.88
CRNDE-208ENST00000560029 PNMTP11086 282 aa3.29□□□□□ -1.88
CRNDE-208ENST00000560029 ATP6V1B2P21281 511 aa3.29□□□□□ -1.88
CRNDE-208ENST00000560029 CHMLP26374 656 aa3.29□□□□□ -1.88
CRNDE-208ENST00000560029 LAP3P28838 519 aa3.29□□□□□ -1.88
CRNDE-208ENST00000560029 HTR1FP30939 366 aa3.29□□□□□ -1.88
CRNDE-208ENST00000560029 RPS14P62263 151 aaKnown RBP3.29□□□□□ -1.88
CRNDE-208ENST00000560029 CTAGE6Q86UF2 777 aa3.29□□□□□ -1.88
CRNDE-208ENST00000560029 CCDC65Q8IXS2 484 aa3.29□□□□□ -1.88
CRNDE-208ENST00000560029 ZNF683Q8IZ20 524 aa3.29□□□□□ -1.88
CRNDE-208ENST00000560029 OR2T3Q8NH03 318 aa3.29□□□□□ -1.88
CRNDE-208ENST00000560029 TRMT10AQ8TBZ6 339 aaKnown RBP3.29□□□□□ -1.88
CRNDE-208ENST00000560029 ST8SIA1Q92185 356 aa3.29□□□□□ -1.88
CRNDE-208ENST00000560029 RPUSD4Q96CM3 377 aaKnown RBP3.29□□□□□ -1.88
CRNDE-208ENST00000560029 TGM7Q96PF1 710 aa3.29□□□□□ -1.88
CRNDE-208ENST00000560029 VCX3BQ9H321 246 aa3.29□□□□□ -1.88
CRNDE-208ENST00000560029 POPDC2Q9HBU9 364 aa3.29□□□□□ -1.88
CRNDE-208ENST00000560029 VCX3AQ9NNX9 186 aa3.29□□□□□ -1.88
CRNDE-208ENST00000560029 NUDT15Q9NV35 164 aa3.29□□□□□ -1.88
CRNDE-208ENST00000560029 SUN2Q9UH99 717 aa3.29□□□□□ -1.88
CRNDE-208ENST00000560029 PAIP2BQ9ULR5 123 aaKnown RBP3.29□□□□□ -1.88
CRNDE-208ENST00000560029 CDH10Q9Y6N8 788 aa3.29□□□□□ -1.88
CRNDE-208ENST00000560029 CROCC2H7BZ55 1655 aa3.29□□□□□ -1.88
CRNDE-208ENST00000560029 CUL7Q14999 1698 aa3.29□□□□□ -1.88
CRNDE-208ENST00000560029 ARHGEF5Q12774 1597 aa3.29□□□□□ -1.88
CRNDE-208ENST00000560029 FANCAO15360 1455 aa3.28□□□□□ -1.88
CRNDE-208ENST00000560029 MED14O60244 1454 aa3.28□□□□□ -1.88
CRNDE-208ENST00000560029 NUP160Q12769 1436 aa3.28□□□□□ -1.88
CRNDE-208ENST00000560029 PPIP5K1Q6PFW1 1433 aa3.28□□□□□ -1.88
CRNDE-208ENST00000560029 YTHDC2Q9H6S0 1430 aaKnown RBP3.28□□□□□ -1.88
CRNDE-208ENST00000560029 RTL1A6NKG5 1358 aa3.28□□□□□ -1.88
CRNDE-208ENST00000560029 POLR3AO14802 1390 aaPredicted RBP3.28□□□□□ -1.88
CRNDE-208ENST00000560029 PLEKHG1Q9ULL1 1385 aa3.28□□□□□ -1.88
CRNDE-208ENST00000560029 HELTA6NFD8 242 aa3.28□□□□□ -1.88
CRNDE-208ENST00000560029 TRDCB7Z8K6 153 aa3.28□□□□□ -1.88
CRNDE-208ENST00000560029 LGI1O95970 557 aa3.28□□□□□ -1.88
CRNDE-208ENST00000560029 RHOXF2BP0C7M4 288 aa3.28□□□□□ -1.88
CRNDE-208ENST00000560029 MGMTP16455 207 aa3.28□□□□□ -1.88
CRNDE-208ENST00000560029 ZNF24P17028 368 aa3.28□□□□□ -1.88
CRNDE-208ENST00000560029 OTX2P32243 289 aa3.28□□□□□ -1.88
CRNDE-208ENST00000560029 HNRNPA3P51991 378 aaKnown RBP3.28□□□□□ -1.88
CRNDE-208ENST00000560029 ZNF133P52736 654 aaPredicted RBP3.28□□□□□ -1.88
CRNDE-208ENST00000560029 C1orf61Q13536 156 aa3.28□□□□□ -1.88
CRNDE-208ENST00000560029 NSUN5P1Q3KNT7 163 aa3.28□□□□□ -1.88
CRNDE-208ENST00000560029 PAGE3Q5JUK9 113 aa3.28□□□□□ -1.88
CRNDE-208ENST00000560029 GPRC6AQ5T6X5 926 aa3.28□□□□□ -1.88
CRNDE-208ENST00000560029 C1orf146Q5VVC0 180 aa3.28□□□□□ -1.88
CRNDE-208ENST00000560029 TMEM225Q6GV28 225 aa3.28□□□□□ -1.88
CRNDE-208ENST00000560029 GALNT17Q6IS24 598 aa3.28□□□□□ -1.88
CRNDE-208ENST00000560029 ZNF530Q6P9A1 599 aaPredicted RBP3.28□□□□□ -1.88
CRNDE-208ENST00000560029 BZW1Q7L1Q6 419 aaKnown RBP3.28□□□□□ -1.88
CRNDE-208ENST00000560029 OR2L13Q8N349 312 aa3.28□□□□□ -1.88
CRNDE-208ENST00000560029 C20orf203Q8NBC4 194 aa3.28□□□□□ -1.88
CRNDE-208ENST00000560029 GMCL1P1Q8NEA9 526 aa3.28□□□□□ -1.88
CRNDE-208ENST00000560029 RNF138Q8WVD3 245 aa3.28□□□□□ -1.88
CRNDE-208ENST00000560029 CCNL2Q96S94 520 aaPredicted RBP3.28□□□□□ -1.88
CRNDE-208ENST00000560029 RHOXF2Q9BQY4 288 aa3.28□□□□□ -1.88
CRNDE-208ENST00000560029 TUBGCP2Q9BSJ2 902 aa3.28□□□□□ -1.88
CRNDE-208ENST00000560029 VCXQ9H320 206 aa3.28□□□□□ -1.88
CRNDE-208ENST00000560029 NANOGQ9H9S0 305 aa3.28□□□□□ -1.88
CRNDE-208ENST00000560029 AIG1Q9NVV5 245 aa3.28□□□□□ -1.88
CRNDE-208ENST00000560029 GGA2Q9UJY4 613 aa3.28□□□□□ -1.88
CRNDE-208ENST00000560029 NEU3Q9UQ49 428 aa3.28□□□□□ -1.88
CRNDE-208ENST00000560029 C15orf41Q9Y2V0 281 aa3.28□□□□□ -1.88
CRNDE-208ENST00000560029 RNF17Q9BXT8 1623 aaKnown RBP3.28□□□□□ -1.88
CRNDE-208ENST00000560029 CC2D2AQ9P2K1 1620 aa3.28□□□□□ -1.88
CRNDE-208ENST00000560029 ADGRL3Q9HAR2 1447 aa3.27□□□□□ -1.89
CRNDE-208ENST00000560029 SHPRHQ149N8 1683 aa3.27□□□□□ -1.89
CRNDE-208ENST00000560029 TTC21AQ8NDW8 1320 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms