RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 PAQR8Q8TEZ7 354 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 DAZLQ92904 295 aaKnown RBP5.33□□□□□ -1.56
USP3-212ENST00000559276 UCN3Q969E3 161 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 SLC25A46Q96AG3 418 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 TMEM80Q96HE8 168 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 SENP5Q96HI0 755 aaPredicted RBP5.33□□□□□ -1.56
USP3-212ENST00000559276 SGCZQ96LD1 299 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 OPALINQ96PE5 141 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 KCNC2Q96PR1 638 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 FOXC2Q99958 501 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 ZNF559Q9BR84 538 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 RHNO1Q9BSD3 238 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 DUSP26Q9BV47 211 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 ZNF717Q9BY31 904 aaPredicted RBP5.33□□□□□ -1.56
USP3-212ENST00000559276 PITHD1Q9GZP4 211 aaPredicted RBP5.33□□□□□ -1.56
USP3-212ENST00000559276 OR51E2Q9H255 320 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 ZNF703Q9H7S9 590 aaPredicted RBP5.33□□□□□ -1.56
USP3-212ENST00000559276 RNF121Q9H920 327 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 ANKRA2Q9H9E1 313 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 SLC25A19Q9HC21 320 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 LYRM4Q9HD34 91 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 RPRD1BQ9NQG5 326 aaKnown RBP5.33□□□□□ -1.56
USP3-212ENST00000559276 DLL4Q9NR61 685 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 FARSBQ9NSD9 589 aaKnown RBP5.33□□□□□ -1.56
USP3-212ENST00000559276 MS4A12Q9NXJ0 267 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 B3GNT2Q9NY97 397 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 ADAM30Q9UKF2 790 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 ANGPT4Q9Y264 503 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 LSM2Q9Y333 95 aaKnown RBP5.33□□□□□ -1.56
USP3-212ENST00000559276 CHCHD2Q9Y6H1 151 aaPredicted RBP5.33□□□□□ -1.56
USP3-212ENST00000559276 CLCA3PQ9Y6N3 262 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 ENPP4Q9Y6X5 453 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 FREM3P0C091 2139 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 TRGV5A0A0B4J1U4 118 aa5.32□□□□□ -1.56
USP3-212ENST00000559276 A0A1W2PQ09 198 aa5.32□□□□□ -1.56
USP3-212ENST00000559276 ANKDD1BA6NHY2 528 aa5.32□□□□□ -1.56
USP3-212ENST00000559276 FIGNL2A6NMB9 653 aa5.32□□□□□ -1.56
USP3-212ENST00000559276 SAP18O00422 153 aaKnown RBP5.32□□□□□ -1.56
USP3-212ENST00000559276 FAAHO00519 579 aa5.32□□□□□ -1.56
USP3-212ENST00000559276 SHOXO15266 292 aa5.32□□□□□ -1.56
USP3-212ENST00000559276 ORC5O43913 435 aa5.32□□□□□ -1.56
USP3-212ENST00000559276 PRKYO43930 277 aa5.32□□□□□ -1.56
USP3-212ENST00000559276 TPST2O60704 377 aa5.32□□□□□ -1.56
USP3-212ENST00000559276 ICMTO60725 284 aa5.32□□□□□ -1.56
USP3-212ENST00000559276 WDR1O75083 606 aa5.32□□□□□ -1.56
USP3-212ENST00000559276 SLC43A1O75387 559 aa5.32□□□□□ -1.56
USP3-212ENST00000559276 GPX5O75715 221 aa5.32□□□□□ -1.56
USP3-212ENST00000559276 LRATO95237 230 aa5.32□□□□□ -1.56
USP3-212ENST00000559276 GADD45GO95257 159 aa5.32□□□□□ -1.56
USP3-212ENST00000559276 CRYZL1O95825 349 aa5.32□□□□□ -1.56
USP3-212ENST00000559276 TGFB1P01137 390 aa5.32□□□□□ -1.56
USP3-212ENST00000559276 IFNW1P05000 195 aa5.32□□□□□ -1.56
USP3-212ENST00000559276 IFNA16P05015 189 aa5.32□□□□□ -1.56
USP3-212ENST00000559276 FBXO45P0C2W1 286 aa5.32□□□□□ -1.56
USP3-212ENST00000559276 OSMP13725 252 aa5.32□□□□□ -1.56
USP3-212ENST00000559276 CPEP16870 476 aa5.32□□□□□ -1.56
USP3-212ENST00000559276 HIST1H1TP22492 207 aaPredicted RBP5.32□□□□□ -1.56
USP3-212ENST00000559276 TACR1P25103 407 aa5.32□□□□□ -1.56
USP3-212ENST00000559276 FGF9P31371 208 aaPredicted RBP5.32□□□□□ -1.56
USP3-212ENST00000559276 CEACAM8P31997 349 aaPredicted RBP5.32□□□□□ -1.56
USP3-212ENST00000559276 SDC2P34741 201 aa5.32□□□□□ -1.56
USP3-212ENST00000559276 GRK5P34947 590 aa5.32□□□□□ -1.56
USP3-212ENST00000559276 SOX18P35713 384 aa5.32□□□□□ -1.56
USP3-212ENST00000559276 GSTM5P46439 218 aa5.32□□□□□ -1.56
USP3-212ENST00000559276 MAN2A2P49641 1150 aa5.32□□□□□ -1.56
USP3-212ENST00000559276 GZMKP49863 264 aa5.32□□□□□ -1.56
USP3-212ENST00000559276 NKX2-5P52952 324 aaPredicted RBP5.32□□□□□ -1.56
USP3-212ENST00000559276 CRYBA2P53672 197 aa5.32□□□□□ -1.56
USP3-212ENST00000559276 AP2S1P53680 142 aaPredicted RBP5.32□□□□□ -1.56
USP3-212ENST00000559276 CRISP1P54107 249 aa5.32□□□□□ -1.56
USP3-212ENST00000559276 P2RX3P56373 397 aa5.32□□□□□ -1.56
USP3-212ENST00000559276 SLC37A1P57057 533 aa5.32□□□□□ -1.56
USP3-212ENST00000559276 PCBP3P57721 371 aaKnown RBP5.32□□□□□ -1.56
USP3-212ENST00000559276 BTG1P62324 171 aa5.32□□□□□ -1.56
USP3-212ENST00000559276 STX4Q12846 297 aa5.32□□□□□ -1.56
USP3-212ENST00000559276 FAPQ12884 760 aa5.32□□□□□ -1.56
USP3-212ENST00000559276 COX10Q12887 443 aa5.32□□□□□ -1.56
USP3-212ENST00000559276 PPP1R8Q12972 351 aaKnown RBP5.32□□□□□ -1.56
USP3-212ENST00000559276 CHIT1Q13231 466 aa5.32□□□□□ -1.56
USP3-212ENST00000559276 SERTAD2Q14140 314 aa5.32□□□□□ -1.56
USP3-212ENST00000559276 SLC10A1Q14973 349 aa5.32□□□□□ -1.56
USP3-212ENST00000559276 LARS2Q15031 903 aaKnown RBP5.32□□□□□ -1.56
USP3-212ENST00000559276 PTGES3Q15185 160 aaKnown RBP5.32□□□□□ -1.56
USP3-212ENST00000559276 MED22Q15528 200 aa5.32□□□□□ -1.56
USP3-212ENST00000559276 ZNF79Q15937 498 aa5.32□□□□□ -1.56
USP3-212ENST00000559276 SSX1Q16384 188 aa5.32□□□□□ -1.56
USP3-212ENST00000559276 SGO1Q5FBB7 561 aa5.32□□□□□ -1.56
USP3-212ENST00000559276 C1orf185Q5T7R7 199 aa5.32□□□□□ -1.56
USP3-212ENST00000559276 RIPPLY2Q5TAB7 128 aa5.32□□□□□ -1.56
USP3-212ENST00000559276 PRAMEF20Q5VT98 475 aa5.32□□□□□ -1.56
USP3-212ENST00000559276 FNDC7Q5VTL7 733 aa5.32□□□□□ -1.56
USP3-212ENST00000559276 FAM219BQ5XKK7 198 aa5.32□□□□□ -1.56
USP3-212ENST00000559276 C12orf73Q69YU5 71 aa5.32□□□□□ -1.56
USP3-212ENST00000559276 MRM1Q6IN84 353 aaKnown RBP5.32□□□□□ -1.56
USP3-212ENST00000559276 PLET1Q6UQ28 207 aa5.32□□□□□ -1.56
USP3-212ENST00000559276 ARSKQ6UWY0 536 aa5.32□□□□□ -1.56
USP3-212ENST00000559276 CD300LDQ6UXZ3 194 aa5.32□□□□□ -1.56
USP3-212ENST00000559276 IDO2Q6ZQW0 420 aa5.32□□□□□ -1.56
USP3-212ENST00000559276 PTCHD4Q6ZW05 846 aa5.32□□□□□ -1.56
USP3-212ENST00000559276 ANKRD46Q86W74 232 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms