RNA–Protein interactions for RNA: ENST00000558795.1

CPNE6-208, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 1,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-208ENST00000558795 MVDP53602 400 aa13.46□□□□□ -0.25
CPNE6-208ENST00000558795 DSTNP60981 165 aa13.46□□□□□ -0.25
CPNE6-208ENST00000558795 GNA13Q14344 377 aa13.46□□□□□ -0.25
CPNE6-208ENST00000558795 ARHGAP11BQ3KRB8 267 aa13.46□□□□□ -0.25
CPNE6-208ENST00000558795 FAM120AOSQ5T036 256 aa13.46□□□□□ -0.25
CPNE6-208ENST00000558795 LIPNQ5VXI9 398 aa13.46□□□□□ -0.25
CPNE6-208ENST00000558795 C16orf62Q7Z3J2 963 aa13.46□□□□□ -0.25
CPNE6-208ENST00000558795 ZHX1-C8orf76Q96EF9 292 aa13.46□□□□□ -0.25
CPNE6-208ENST00000558795 ECSITQ9BQ95 431 aa13.46□□□□□ -0.25
CPNE6-208ENST00000558795 PIMREGQ9BSJ6 248 aa13.46□□□□□ -0.25
CPNE6-208ENST00000558795 QRSL1Q9H0R6 528 aaKnown RBP13.46□□□□□ -0.25
CPNE6-208ENST00000558795 ASB6Q9NWX5 421 aa13.46□□□□□ -0.25
CPNE6-208ENST00000558795 P2RX2Q9UBL9 471 aa13.46□□□□□ -0.25
CPNE6-208ENST00000558795 NOSIPQ9Y314 301 aaKnown RBP13.46□□□□□ -0.25
CPNE6-208ENST00000558795 NUP214P35658 2090 aaPredicted RBP13.46□□□□□ -0.26
CPNE6-208ENST00000558795 IGKV3D-15A0A087WSY6 115 aa13.45□□□□□ -0.26
CPNE6-208ENST00000558795 SLC35F4A4IF30 521 aa13.45□□□□□ -0.26
CPNE6-208ENST00000558795 B2RBV5 119 aa13.45□□□□□ -0.26
CPNE6-208ENST00000558795 CYP7B1O75881 506 aa13.45□□□□□ -0.26
CPNE6-208ENST00000558795 LY6HO94772 140 aa13.45□□□□□ -0.26
CPNE6-208ENST00000558795 UBOX5O94941 541 aa13.45□□□□□ -0.26
CPNE6-208ENST00000558795 C1QCP02747 245 aa13.45□□□□□ -0.26
CPNE6-208ENST00000558795 BMP2P12643 396 aa13.45□□□□□ -0.26
CPNE6-208ENST00000558795 MTPNP58546 118 aa13.45□□□□□ -0.26
CPNE6-208ENST00000558795 ABLIM2Q6H8Q1 611 aa13.45□□□□□ -0.26
CPNE6-208ENST00000558795 OR7E24Q6IFN5 339 aa13.45□□□□□ -0.26
CPNE6-208ENST00000558795 C8orf82Q6P1X6 216 aaPredicted RBP13.45□□□□□ -0.26
CPNE6-208ENST00000558795 C6orf89Q6UWU4 347 aa13.45□□□□□ -0.26
CPNE6-208ENST00000558795 C16orf89Q6UX73 402 aa13.45□□□□□ -0.26
CPNE6-208ENST00000558795 TMPPEQ6ZT21 453 aa13.45□□□□□ -0.26
CPNE6-208ENST00000558795 SERPINA11Q86U17 422 aa13.45□□□□□ -0.26
CPNE6-208ENST00000558795 TMEM234Q8WY98 164 aa13.45□□□□□ -0.26
CPNE6-208ENST00000558795 ST8SIA1Q92185 356 aa13.45□□□□□ -0.26
CPNE6-208ENST00000558795 RAB8BQ92930 207 aa13.45□□□□□ -0.26
CPNE6-208ENST00000558795 C3orf49Q96BT1 292 aa13.45□□□□□ -0.26
CPNE6-208ENST00000558795 ZNF524Q96C55 264 aa13.45□□□□□ -0.26
CPNE6-208ENST00000558795 SPATA9Q9BWV2 254 aa13.45□□□□□ -0.26
CPNE6-208ENST00000558795 C1QTNF6Q9BXI9 259 aa13.45□□□□□ -0.26
CPNE6-208ENST00000558795 KAT8Q9H7Z6 458 aaKnown RBP13.45□□□□□ -0.26
CPNE6-208ENST00000558795 CALML5Q9NZT1 146 aa13.45□□□□□ -0.26
CPNE6-208ENST00000558795 FKBP7Q9Y680 259 aa13.45□□□□□ -0.26
CPNE6-208ENST00000558795 KCNE3Q9Y6H6 103 aa13.45□□□□□ -0.26
CPNE6-208ENST00000558795 NPIPB9F8W1W9 429 aa13.44□□□□□ -0.26
CPNE6-208ENST00000558795 NDUFS8O00217 210 aa13.44□□□□□ -0.26
CPNE6-208ENST00000558795 ETV2O00321 342 aaPredicted RBP13.44□□□□□ -0.26
CPNE6-208ENST00000558795 EBAG9O00559 213 aa13.44□□□□□ -0.26
CPNE6-208ENST00000558795 GPR171O14626 319 aa13.44□□□□□ -0.26
CPNE6-208ENST00000558795 KIAA0513O60268 411 aa13.44□□□□□ -0.26
CPNE6-208ENST00000558795 HNRNPCL1O60812 293 aaKnown RBP13.44□□□□□ -0.26
CPNE6-208ENST00000558795 STX11O75558 287 aa13.44□□□□□ -0.26
CPNE6-208ENST00000558795 ATP5HO75947 161 aa13.44□□□□□ -0.26
CPNE6-208ENST00000558795 GUSBP08236 651 aa13.44□□□□□ -0.26
CPNE6-208ENST00000558795 T-ENOLP0DO92 83 aa13.44□□□□□ -0.26
CPNE6-208ENST00000558795 NR2F1P10589 423 aa13.44□□□□□ -0.26
CPNE6-208ENST00000558795 TFPIP10646 304 aa13.44□□□□□ -0.26
CPNE6-208ENST00000558795 APEHP13798 732 aaKnown RBP13.44□□□□□ -0.26
CPNE6-208ENST00000558795 SLC6A2P23975 617 aa13.44□□□□□ -0.26
CPNE6-208ENST00000558795 APOBEC3AP31941 199 aaPredicted RBP13.44□□□□□ -0.26
CPNE6-208ENST00000558795 PSME3P61289 254 aa13.44□□□□□ -0.26
CPNE6-208ENST00000558795 HPCAP84074 193 aa13.44□□□□□ -0.26
CPNE6-208ENST00000558795 MERTKQ12866 999 aa13.44□□□□□ -0.26
CPNE6-208ENST00000558795 PDK3Q15120 406 aa13.44□□□□□ -0.26
CPNE6-208ENST00000558795 GABRA6Q16445 453 aa13.44□□□□□ -0.26
CPNE6-208ENST00000558795 GPAT3Q53EU6 434 aa13.44□□□□□ -0.26
CPNE6-208ENST00000558795 SYT14P1Q58G82 188 aa13.44□□□□□ -0.26
CPNE6-208ENST00000558795 GCNT6Q5T4J0 391 aa13.44□□□□□ -0.26
CPNE6-208ENST00000558795 PGAM4Q8N0Y7 254 aa13.44□□□□□ -0.26
CPNE6-208ENST00000558795 OR10A6Q8NH74 314 aa13.44□□□□□ -0.26
CPNE6-208ENST00000558795 SLC25A43Q8WUT9 341 aaPredicted RBP13.44□□□□□ -0.26
CPNE6-208ENST00000558795 MSI2Q96DH6 328 aaKnown RBP13.44□□□□□ -0.26
CPNE6-208ENST00000558795 TRNT1Q96Q11 434 aaKnown RBP13.44□□□□□ -0.26
CPNE6-208ENST00000558795 SDF2Q99470 211 aa13.44□□□□□ -0.26
CPNE6-208ENST00000558795 C1orf21Q9H246 121 aa13.44□□□□□ -0.26
CPNE6-208ENST00000558795 IKZF5Q9H5V7 419 aa13.44□□□□□ -0.26
CPNE6-208ENST00000558795 TMEM38AQ9H6F2 299 aa13.44□□□□□ -0.26
CPNE6-208ENST00000558795 A4GALTQ9NPC4 353 aa13.44□□□□□ -0.26
CPNE6-208ENST00000558795 SPAG4Q9NPE6 437 aa13.44□□□□□ -0.26
CPNE6-208ENST00000558795 POLE3Q9NRF9 147 aa13.44□□□□□ -0.26
CPNE6-208ENST00000558795 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.44□□□□□ -0.26
CPNE6-208ENST00000558795 SPIN1Q9Y657 262 aaPredicted RBP13.44□□□□□ -0.26
CPNE6-208ENST00000558795 SERINC4A6NH21 518 aa13.43□□□□□ -0.26
CPNE6-208ENST00000558795 DNAJA2O60884 412 aa13.43□□□□□ -0.26
CPNE6-208ENST00000558795 MRPL33O75394 65 aaKnown RBP13.43□□□□□ -0.26
CPNE6-208ENST00000558795 TFPTP0C1Z6 253 aa13.43□□□□□ -0.26
CPNE6-208ENST00000558795 NR4A2P43354 598 aa13.43□□□□□ -0.26
CPNE6-208ENST00000558795 RASSF2P50749 326 aa13.43□□□□□ -0.26
CPNE6-208ENST00000558795 SESN3P58005 492 aa13.43□□□□□ -0.26
CPNE6-208ENST00000558795 GABPB1Q06547 395 aaPredicted RBP13.43□□□□□ -0.26
CPNE6-208ENST00000558795 RBBP4Q09028 425 aa13.43□□□□□ -0.26
CPNE6-208ENST00000558795 SELPLGQ14242 412 aa13.43□□□□□ -0.26
CPNE6-208ENST00000558795 CARTPTQ16568 116 aa13.43□□□□□ -0.26
CPNE6-208ENST00000558795 CYP51A1Q16850 503 aa13.43□□□□□ -0.26
CPNE6-208ENST00000558795 RABL3Q5HYI8 236 aa13.43□□□□□ -0.26
CPNE6-208ENST00000558795 PDZK1Q5T2W1 519 aa13.43□□□□□ -0.26
CPNE6-208ENST00000558795 SLC15A3Q8IY34 581 aa13.43□□□□□ -0.26
CPNE6-208ENST00000558795 PIGXQ8TBF5 258 aa13.43□□□□□ -0.26
CPNE6-208ENST00000558795 PMM1Q92871 262 aa13.43□□□□□ -0.26
CPNE6-208ENST00000558795 FBXO17Q96EF6 278 aa13.43□□□□□ -0.26
CPNE6-208ENST00000558795 MUS81Q96NY9 551 aa13.43□□□□□ -0.26
CPNE6-208ENST00000558795 LAT2Q9GZY6 243 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms