RNA–Protein interactions for RNA: ENST00000558787.1

MARK3-215, Transcript of microtubule affinity regulating kinase 3, human

TSL 2

Gene MARK3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-215	ENST00000558787	KLHL9	Q9P2J3	617 aa		6.17	□□□□□ -1.42
MARK3-215	ENST00000558787	PCDHGB4	Q9UN71	923 aa		6.17	□□□□□ -1.42
MARK3-215	ENST00000558787	LIPT1	Q9Y234	373 aa		6.17	□□□□□ -1.42
MARK3-215	ENST00000558787	WDR45	Q9Y484	360 aa		6.17	□□□□□ -1.42
MARK3-215	ENST00000558787	MAGED1	Q9Y5V3	778 aa	Predicted RBP	6.17	□□□□□ -1.42
MARK3-215	ENST00000558787	GPR45	Q9Y5Y3	372 aa		6.17	□□□□□ -1.42
MARK3-215	ENST00000558787	CAPN7	Q9Y6W3	813 aa		6.17	□□□□□ -1.42
MARK3-215	ENST00000558787	DUXA	A6NLW8	204 aa		6.16	□□□□□ -1.42
MARK3-215	ENST00000558787	FAM171A2	A8MVW0	826 aa		6.16	□□□□□ -1.42
MARK3-215	ENST00000558787	OVOL3	O00110	214 aa		6.16	□□□□□ -1.42
MARK3-215	ENST00000558787	HMGN4	O00479	90 aa		6.16	□□□□□ -1.42
MARK3-215	ENST00000558787	RGS13	O14921	159 aa		6.16	□□□□□ -1.42
MARK3-215	ENST00000558787	RRP9	O43818	475 aa	Known RBP	6.16	□□□□□ -1.42
MARK3-215	ENST00000558787	KIAA0513	O60268	411 aa		6.16	□□□□□ -1.42
MARK3-215	ENST00000558787	PSPN	O60542	156 aa		6.16	□□□□□ -1.42
MARK3-215	ENST00000558787	RAD51D	O75771	328 aa		6.16	□□□□□ -1.42
MARK3-215	ENST00000558787	SOX30	O94993	753 aa		6.16	□□□□□ -1.42
MARK3-215	ENST00000558787	CD8A	P01732	235 aa		6.16	□□□□□ -1.42
MARK3-215	ENST00000558787	DANCR	P0C864	163 aa		6.16	□□□□□ -1.42
MARK3-215	ENST00000558787	PAX1	P15863	534 aa		6.16	□□□□□ -1.42
MARK3-215	ENST00000558787	PGC	P20142	388 aa		6.16	□□□□□ -1.42
MARK3-215	ENST00000558787	UQCRC2	P22695	453 aa		6.16	□□□□□ -1.42
MARK3-215	ENST00000558787	IL12A	P29459	219 aa		6.16	□□□□□ -1.42
MARK3-215	ENST00000558787	S100A3	P33764	101 aa		6.16	□□□□□ -1.42
MARK3-215	ENST00000558787	ACVR1B	P36896	505 aa		6.16	□□□□□ -1.42
MARK3-215	ENST00000558787	IDH2	P48735	452 aa	Known RBP	6.16	□□□□□ -1.42
MARK3-215	ENST00000558787	ZNF83	P51522	516 aa		6.16	□□□□□ -1.42
MARK3-215	ENST00000558787	OR2B6	P58173	313 aa		6.16	□□□□□ -1.42
MARK3-215	ENST00000558787	RPS4X	P62701	263 aa	Known RBP	6.16	□□□□□ -1.42
MARK3-215	ENST00000558787	KRTAP1-1	Q07627	177 aa		6.16	□□□□□ -1.42
MARK3-215	ENST00000558787	KRT72	Q14CN4	511 aa		6.16	□□□□□ -1.42
MARK3-215	ENST00000558787	PPA1	Q15181	289 aa		6.16	□□□□□ -1.42
MARK3-215	ENST00000558787	SYPL1	Q16563	259 aa		6.16	□□□□□ -1.42
MARK3-215	ENST00000558787	CLEC12B	Q2HXU8	276 aa		6.16	□□□□□ -1.42
MARK3-215	ENST00000558787	DPY19L1	Q2PZI1	675 aa		6.16	□□□□□ -1.42
MARK3-215	ENST00000558787	PGGHG	Q32M88	737 aa		6.16	□□□□□ -1.42
MARK3-215	ENST00000558787	ZNF672	Q499Z4	452 aa	Predicted RBP	6.16	□□□□□ -1.42
MARK3-215	ENST00000558787	GPAT3	Q53EU6	434 aa		6.16	□□□□□ -1.42
MARK3-215	ENST00000558787	SYT14P1	Q58G82	188 aa		6.16	□□□□□ -1.42
MARK3-215	ENST00000558787	ATAD3B	Q5T9A4	648 aa		6.16	□□□□□ -1.42
MARK3-215	ENST00000558787	ANXA8L1	Q5VT79	327 aa		6.16	□□□□□ -1.42
MARK3-215	ENST00000558787	C9orf135	Q5VTT2	229 aa		6.16	□□□□□ -1.42
MARK3-215	ENST00000558787	FAM91A1	Q658Y4	838 aa		6.16	□□□□□ -1.42
MARK3-215	ENST00000558787	C3orf33	Q6P1S2	294 aa		6.16	□□□□□ -1.42
MARK3-215	ENST00000558787	ZNF621	Q6ZSS3	439 aa		6.16	□□□□□ -1.42
MARK3-215	ENST00000558787	TRPM8	Q7Z2W7	1104 aa		6.16	□□□□□ -1.42
MARK3-215	ENST00000558787	REC114	Q7Z4M0	266 aa		6.16	□□□□□ -1.42
MARK3-215	ENST00000558787	GALNT5	Q7Z7M9	940 aa		6.16	□□□□□ -1.42
MARK3-215	ENST00000558787	ADGRG3	Q86Y34	549 aa		6.16	□□□□□ -1.42
MARK3-215	ENST00000558787	UBE2J2	Q8N2K1	259 aa		6.16	□□□□□ -1.42
MARK3-215	ENST00000558787	ZNF433	Q8N7K0	673 aa	Predicted RBP	6.16	□□□□□ -1.42
MARK3-215	ENST00000558787	ZNF563	Q8TA94	476 aa		6.16	□□□□□ -1.42
MARK3-215	ENST00000558787	MIPOL1	Q8TD10	442 aa		6.16	□□□□□ -1.42
MARK3-215	ENST00000558787	TSPEAR	Q8WU66	669 aa		6.16	□□□□□ -1.42
MARK3-215	ENST00000558787	TMEM234	Q8WY98	164 aa		6.16	□□□□□ -1.42
MARK3-215	ENST00000558787	ST8SIA1	Q92185	356 aa		6.16	□□□□□ -1.42
MARK3-215	ENST00000558787	CMTM5	Q96DZ9	223 aa		6.16	□□□□□ -1.42
MARK3-215	ENST00000558787	NEURL3	Q96EH8	262 aa		6.16	□□□□□ -1.42
MARK3-215	ENST00000558787	CCDC106	Q9BWC9	280 aa		6.16	□□□□□ -1.42
MARK3-215	ENST00000558787	TRIM2	Q9C040	744 aa		6.16	□□□□□ -1.42
MARK3-215	ENST00000558787	OR10A4	Q9H209	315 aa		6.16	□□□□□ -1.42
MARK3-215	ENST00000558787	CXorf56	Q9H5V9	222 aa		6.16	□□□□□ -1.42
MARK3-215	ENST00000558787	ZNF385D	Q9H6B1	395 aa		6.16	□□□□□ -1.42
MARK3-215	ENST00000558787	GP6	Q9HCN6	339 aa		6.16	□□□□□ -1.42
MARK3-215	ENST00000558787	FBN1	P35555	2871 aa	Known RBP	6.16	□□□□□ -1.42
MARK3-215	ENST00000558787	STAB1	Q9NY15	2570 aa		6.15	□□□□□ -1.42
MARK3-215	ENST00000558787	PLCE1	Q9P212	2302 aa		6.15	□□□□□ -1.42
MARK3-215	ENST00000558787	MXRA5	Q9NR99	2828 aa		6.15	□□□□□ -1.42
MARK3-215	ENST00000558787	TMEM72	A0PK05	275 aa		6.15	□□□□□ -1.42
MARK3-215	ENST00000558787	ZC3H12D	A2A288	527 aa	Known RBP	6.15	□□□□□ -1.42
MARK3-215	ENST00000558787	FAM234B	A2RU67	622 aa		6.15	□□□□□ -1.42
MARK3-215	ENST00000558787	CCDC154	A6NI56	674 aa		6.15	□□□□□ -1.42
MARK3-215	ENST00000558787	CCT8L1P	A6NM43	557 aa		6.15	□□□□□ -1.42
MARK3-215	ENST00000558787	ZNF716	A6NP11	495 aa		6.15	□□□□□ -1.42
MARK3-215	ENST00000558787	ZNF724	A8MTY0	619 aa		6.15	□□□□□ -1.42
MARK3-215	ENST00000558787	SHISA9	B4DS77	424 aa		6.15	□□□□□ -1.42
MARK3-215	ENST00000558787	EBAG9	O00559	213 aa		6.15	□□□□□ -1.42
MARK3-215	ENST00000558787	AK1	P00568	194 aa		6.15	□□□□□ -1.42
MARK3-215	ENST00000558787	IGHV4-39	P01824	125 aa		6.15	□□□□□ -1.42
MARK3-215	ENST00000558787	IL6	P05231	212 aa		6.15	□□□□□ -1.42
MARK3-215	ENST00000558787	CHRM4	P08173	479 aa		6.15	□□□□□ -1.42
MARK3-215	ENST00000558787	IMPDH2	P12268	514 aa		6.15	□□□□□ -1.42
MARK3-215	ENST00000558787	GGT1	P19440	569 aa		6.15	□□□□□ -1.42
MARK3-215	ENST00000558787	PRDX6	P30041	224 aa		6.15	□□□□□ -1.42
MARK3-215	ENST00000558787	APOBEC1	P41238	236 aa	Known RBP	6.15	□□□□□ -1.42
MARK3-215	ENST00000558787	KHK	P50053	298 aa		6.15	□□□□□ -1.42
MARK3-215	ENST00000558787	MNAT1	P51948	309 aa		6.15	□□□□□ -1.42
MARK3-215	ENST00000558787	POLR2J	P52435	117 aa	Known RBP	6.15	□□□□□ -1.42
MARK3-215	ENST00000558787	KCNJ10	P78508	379 aa		6.15	□□□□□ -1.42
MARK3-215	ENST00000558787	SPOCK1	Q08629	439 aa		6.15	□□□□□ -1.42
MARK3-215	ENST00000558787	LRRC74A	Q0VAA2	488 aa		6.15	□□□□□ -1.42
MARK3-215	ENST00000558787	KLF10	Q13118	480 aa		6.15	□□□□□ -1.42
MARK3-215	ENST00000558787	VEZF1	Q14119	521 aa		6.15	□□□□□ -1.42
MARK3-215	ENST00000558787	AGK	Q53H12	422 aa		6.15	□□□□□ -1.42
MARK3-215	ENST00000558787	FBXW9	Q5XUX1	488 aa		6.15	□□□□□ -1.42
MARK3-215	ENST00000558787	FITM2	Q8N6M3	262 aa		6.15	□□□□□ -1.42
MARK3-215	ENST00000558787	FAM71C	Q8NEG0	241 aa		6.15	□□□□□ -1.42
MARK3-215	ENST00000558787	VPS37A	Q8NEZ2	397 aa		6.15	□□□□□ -1.42
MARK3-215	ENST00000558787	OR52E4	Q8NGH9	312 aa		6.15	□□□□□ -1.42
MARK3-215	ENST00000558787	OR52N5	Q8NH56	324 aa		6.15	□□□□□ -1.42

Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms