RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 NPIPA2E9PIF3 369 aa9.34□□□□□ -0.91
TPM1-212ENST00000558347 NPIPA3F8WFD2 350 aa9.34□□□□□ -0.91
TPM1-212ENST00000558347 C19orf84I3L1E1 186 aa9.34□□□□□ -0.91
TPM1-212ENST00000558347 ATP6V1G1O75348 118 aa9.34□□□□□ -0.91
TPM1-212ENST00000558347 AK1P00568 194 aa9.34□□□□□ -0.91
TPM1-212ENST00000558347 IGHG3P01860 377 aa9.34□□□□□ -0.91
TPM1-212ENST00000558347 RFPL3SP0C7P2 107 aa9.34□□□□□ -0.91
TPM1-212ENST00000558347 HNRNPCL4P0DMR1 293 aa9.34□□□□□ -0.91
TPM1-212ENST00000558347 NR2F1P10589 423 aa9.34□□□□□ -0.91
TPM1-212ENST00000558347 GRK5P34947 590 aa9.34□□□□□ -0.91
TPM1-212ENST00000558347 EIF2B2P49770 351 aaKnown RBP9.34□□□□□ -0.91
TPM1-212ENST00000558347 CRISP3P54108 245 aa9.34□□□□□ -0.91
TPM1-212ENST00000558347 DEFA1P59665 94 aa9.34□□□□□ -0.91
TPM1-212ENST00000558347 DEFA3P59666 94 aa9.34□□□□□ -0.91
TPM1-212ENST00000558347 FUT5Q11128 374 aa9.34□□□□□ -0.91
TPM1-212ENST00000558347 GANABQ14697 944 aaKnown RBP9.34□□□□□ -0.91
TPM1-212ENST00000558347 ZNHIT3Q15649 155 aaPredicted RBP9.34□□□□□ -0.91
TPM1-212ENST00000558347 SYPL1Q16563 259 aa9.34□□□□□ -0.91
TPM1-212ENST00000558347 NTRK2Q16620 822 aa9.34□□□□□ -0.91
TPM1-212ENST00000558347 DUSP5Q16690 384 aa9.34□□□□□ -0.91
TPM1-212ENST00000558347 HYAL4Q2M3T9 481 aa9.34□□□□□ -0.91
TPM1-212ENST00000558347 ARHGAP11BQ3KRB8 267 aa9.34□□□□□ -0.91
TPM1-212ENST00000558347 FAM109AQ8N4B1 249 aa9.34□□□□□ -0.91
TPM1-212ENST00000558347 OR8J1Q8NGP2 316 aa9.34□□□□□ -0.91
TPM1-212ENST00000558347 OR5M3Q8NGP4 307 aa9.34□□□□□ -0.91
TPM1-212ENST00000558347 PMM1Q92871 262 aa9.34□□□□□ -0.91
TPM1-212ENST00000558347 TP53INP1Q96A56 240 aa9.34□□□□□ -0.91
TPM1-212ENST00000558347 TMEM80Q96HE8 168 aa9.34□□□□□ -0.91
TPM1-212ENST00000558347 MND1Q9BWT6 205 aa9.34□□□□□ -0.91
TPM1-212ENST00000558347 C6orf62Q9GZU0 229 aaPredicted RBP9.34□□□□□ -0.91
TPM1-212ENST00000558347 FOLH1BQ9HBA9 442 aa9.34□□□□□ -0.91
TPM1-212ENST00000558347 AMBNQ9NP70 447 aa9.34□□□□□ -0.91
TPM1-212ENST00000558347 POLE3Q9NRF9 147 aa9.34□□□□□ -0.91
TPM1-212ENST00000558347 SEC14L4Q9UDX3 406 aa9.34□□□□□ -0.91
TPM1-212ENST00000558347 ZNF229Q9UJW7 825 aa9.34□□□□□ -0.91
TPM1-212ENST00000558347 LSM2Q9Y333 95 aaKnown RBP9.34□□□□□ -0.91
TPM1-212ENST00000558347 NPFFR2Q9Y5X5 522 aa9.34□□□□□ -0.91
TPM1-212ENST00000558347 GPC6Q9Y625 555 aaPredicted RBP9.34□□□□□ -0.91
TPM1-212ENST00000558347 DNAJC13O75165 2243 aa9.34□□□□□ -0.91
TPM1-212ENST00000558347 LRRC3CA6NJW4 275 aa9.33□□□□□ -0.92
TPM1-212ENST00000558347 CLDN14O95500 239 aa9.33□□□□□ -0.92
TPM1-212ENST00000558347 CHRM4P08173 479 aa9.33□□□□□ -0.92
TPM1-212ENST00000558347 TGFBR1P36897 503 aa9.33□□□□□ -0.92
TPM1-212ENST00000558347 FBXW4P57775 412 aa9.33□□□□□ -0.92
TPM1-212ENST00000558347 DCAF7P61962 342 aa9.33□□□□□ -0.92
TPM1-212ENST00000558347 PSG6Q00889 435 aa9.33□□□□□ -0.92
TPM1-212ENST00000558347 ZNF155Q12901 538 aaPredicted RBP9.33□□□□□ -0.92
TPM1-212ENST00000558347 TSTQ16762 297 aaKnown RBP9.33□□□□□ -0.92
TPM1-212ENST00000558347 SPANXN2Q5MJ10 180 aa9.33□□□□□ -0.92
TPM1-212ENST00000558347 HLA-DQA1Q5Y7H0 255 aa9.33□□□□□ -0.92
TPM1-212ENST00000558347 STEAP3Q658P3 488 aa9.33□□□□□ -0.92
TPM1-212ENST00000558347 BICRALQ6AI39 1079 aa9.33□□□□□ -0.92
TPM1-212ENST00000558347 CASP12Q6UXS9 341 aa9.33□□□□□ -0.92
TPM1-212ENST00000558347 TRILQ7L0X0 811 aa9.33□□□□□ -0.92
TPM1-212ENST00000558347 C16orf62Q7Z3J2 963 aa9.33□□□□□ -0.92
TPM1-212ENST00000558347 CCDC190Q86UF4 302 aa9.33□□□□□ -0.92
TPM1-212ENST00000558347 DND1Q8IYX4 353 aaKnown RBP9.33□□□□□ -0.92
TPM1-212ENST00000558347 PRR22Q8IZ63 422 aa9.33□□□□□ -0.92
TPM1-212ENST00000558347 PARP16Q8N5Y8 322 aa9.33□□□□□ -0.92
TPM1-212ENST00000558347 PROKR2Q8NFJ6 384 aa9.33□□□□□ -0.92
TPM1-212ENST00000558347 SETD6Q8TBK2 473 aa9.33□□□□□ -0.92
TPM1-212ENST00000558347 SLC9A6Q92581 669 aa9.33□□□□□ -0.92
TPM1-212ENST00000558347 CDS1Q92903 461 aa9.33□□□□□ -0.92
TPM1-212ENST00000558347 TREX2Q9BQ50 279 aaPredicted RBP9.33□□□□□ -0.92
TPM1-212ENST00000558347 CHCHD6Q9BRQ6 235 aa9.33□□□□□ -0.92
TPM1-212ENST00000558347 CENPOQ9BU64 300 aa9.33□□□□□ -0.92
TPM1-212ENST00000558347 POLDIP3Q9BY77 421 aaKnown RBP9.33□□□□□ -0.92
TPM1-212ENST00000558347 SAP130Q9H0E3 1048 aa9.33□□□□□ -0.92
TPM1-212ENST00000558347 NXF5Q9H1B4 397 aaKnown RBP9.33□□□□□ -0.92
TPM1-212ENST00000558347 SLC38A1Q9H2H9 487 aa9.33□□□□□ -0.92
TPM1-212ENST00000558347 TP63Q9H3D4 680 aaPredicted RBP9.33□□□□□ -0.92
TPM1-212ENST00000558347 ZNF703Q9H7S9 590 aaPredicted RBP9.33□□□□□ -0.92
TPM1-212ENST00000558347 ZFP64Q9NPA5 681 aa9.33□□□□□ -0.92
TPM1-212ENST00000558347 ABCB10Q9NRK6 738 aa9.33□□□□□ -0.92
TPM1-212ENST00000558347 KCNE3Q9Y6H6 103 aa9.33□□□□□ -0.92
TPM1-212ENST00000558347 TACC2O95359 2948 aa9.33□□□□□ -0.92
TPM1-212ENST00000558347 CACNA1CQ13936 2221 aa9.32□□□□□ -0.92
TPM1-212ENST00000558347 A0A1B0GVC2 190 aa9.32□□□□□ -0.92
TPM1-212ENST00000558347 KIAA0513O60268 411 aa9.32□□□□□ -0.92
TPM1-212ENST00000558347 ENTPD6O75354 484 aa9.32□□□□□ -0.92
TPM1-212ENST00000558347 NME6O75414 186 aaPredicted RBP9.32□□□□□ -0.92
TPM1-212ENST00000558347 UGT2B17O75795 530 aa9.32□□□□□ -0.92
TPM1-212ENST00000558347 APOA1P02647 267 aa9.32□□□□□ -0.92
TPM1-212ENST00000558347 CT45A8P0DMV1 189 aa9.32□□□□□ -0.92
TPM1-212ENST00000558347 CT45A9P0DMV2 189 aa9.32□□□□□ -0.92
TPM1-212ENST00000558347 POU2F1P14859 743 aa9.32□□□□□ -0.92
TPM1-212ENST00000558347 GSTM3P21266 225 aa9.32□□□□□ -0.92
TPM1-212ENST00000558347 PPICP45877 212 aa9.32□□□□□ -0.92
TPM1-212ENST00000558347 TMED10P49755 219 aaKnown RBP9.32□□□□□ -0.92
TPM1-212ENST00000558347 POU6F2P78424 691 aaPredicted RBP9.32□□□□□ -0.92
TPM1-212ENST00000558347 MLLT11Q13015 90 aaPredicted RBP9.32□□□□□ -0.92
TPM1-212ENST00000558347 C1DQ13901 141 aaKnown RBP9.32□□□□□ -0.92
TPM1-212ENST00000558347 SLC10A1Q14973 349 aa9.32□□□□□ -0.92
TPM1-212ENST00000558347 MED22Q15528 200 aa9.32□□□□□ -0.92
TPM1-212ENST00000558347 SSX1Q16384 188 aa9.32□□□□□ -0.92
TPM1-212ENST00000558347 NNATQ16517 81 aa9.32□□□□□ -0.92
TPM1-212ENST00000558347 CYP27C1Q4G0S4 372 aa9.32□□□□□ -0.92
TPM1-212ENST00000558347 GXYLT1Q4G148 440 aa9.32□□□□□ -0.92
TPM1-212ENST00000558347 GPAT3Q53EU6 434 aa9.32□□□□□ -0.92
TPM1-212ENST00000558347 CT45A2Q5DJT8 189 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms