RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 RFLNBQ8N5W9 214 aa3.12□□□□□ -1.91
TDP1-217ENST00000557782 FAM86B1Q8N7N1 296 aa3.12□□□□□ -1.91
TDP1-217ENST00000557782 FNDC5Q8NAU1 212 aa3.12□□□□□ -1.91
TDP1-217ENST00000557782 FBXL13Q8NEE6 735 aa3.12□□□□□ -1.91
TDP1-217ENST00000557782 CA5BP1Q8WTZ4 195 aa3.12□□□□□ -1.91
TDP1-217ENST00000557782 PYROXD1Q8WU10 500 aa3.12□□□□□ -1.91
TDP1-217ENST00000557782 CAPSLQ8WWF8 208 aa3.12□□□□□ -1.91
TDP1-217ENST00000557782 ZNF524Q96C55 264 aa3.12□□□□□ -1.91
TDP1-217ENST00000557782 NAF1Q96HR8 494 aaKnown RBP3.12□□□□□ -1.91
TDP1-217ENST00000557782 HSFY1Q96LI6 401 aa3.12□□□□□ -1.91
TDP1-217ENST00000557782 MCRIP2Q9BUT9 160 aaKnown RBP3.12□□□□□ -1.91
TDP1-217ENST00000557782 HCAR1Q9BXC0 346 aa3.12□□□□□ -1.91
TDP1-217ENST00000557782 UCK2Q9BZX2 261 aa3.12□□□□□ -1.91
TDP1-217ENST00000557782 RAB1BQ9H0U4 201 aa3.12□□□□□ -1.91
TDP1-217ENST00000557782 OR52A5Q9H2C5 316 aa3.12□□□□□ -1.91
TDP1-217ENST00000557782 OR51M1Q9H341 326 aa3.12□□□□□ -1.91
TDP1-217ENST00000557782 PIGUQ9H490 435 aa3.12□□□□□ -1.91
TDP1-217ENST00000557782 TXLNGQ9NUQ3 528 aa3.12□□□□□ -1.91
TDP1-217ENST00000557782 NDE1Q9NXR1 346 aa3.12□□□□□ -1.91
TDP1-217ENST00000557782 ADAM22Q9P0K1 906 aa3.12□□□□□ -1.91
TDP1-217ENST00000557782 TMEM181Q9P2C4 612 aa3.12□□□□□ -1.91
TDP1-217ENST00000557782 ABCD2Q9UBJ2 740 aa3.12□□□□□ -1.91
TDP1-217ENST00000557782 V9GYY5 206 aaPredicted RBP3.12□□□□□ -1.91
TDP1-217ENST00000557782 WDR81Q562E7 1941 aa3.12□□□□□ -1.91
TDP1-217ENST00000557782 GOLGA8QA0A0J9YX86 632 aa3.11□□□□□ -1.91
TDP1-217ENST00000557782 DNAJC9-AS1A6NH13 148 aa3.11□□□□□ -1.91
TDP1-217ENST00000557782 PMS2P5A8MQ11 134 aa3.11□□□□□ -1.91
TDP1-217ENST00000557782 CENPXA8MT69 81 aa3.11□□□□□ -1.91
TDP1-217ENST00000557782 FOXI3A8MTJ6 420 aaPredicted RBP3.11□□□□□ -1.91
TDP1-217ENST00000557782 IQCF5A8MTL0 148 aa3.11□□□□□ -1.91
TDP1-217ENST00000557782 ZNF99A8MXY4 864 aaPredicted RBP3.11□□□□□ -1.91
TDP1-217ENST00000557782 E9PLD3 99 aa3.11□□□□□ -1.91
TDP1-217ENST00000557782 K7EQG2 157 aa3.11□□□□□ -1.91
TDP1-217ENST00000557782 NOL4O94818 638 aa3.11□□□□□ -1.91
TDP1-217ENST00000557782 SMC2O95347 1197 aa3.11□□□□□ -1.91
TDP1-217ENST00000557782 FARS2O95363 451 aaKnown RBP3.11□□□□□ -1.91
TDP1-217ENST00000557782 ETHE1O95571 254 aa3.11□□□□□ -1.91
TDP1-217ENST00000557782 SERPINB2P05120 415 aa3.11□□□□□ -1.91
TDP1-217ENST00000557782 T-ENOLP0DO92 83 aa3.11□□□□□ -1.91
TDP1-217ENST00000557782 HPGDP15428 266 aa3.11□□□□□ -1.91
TDP1-217ENST00000557782 ZNF3P17036 446 aa3.11□□□□□ -1.91
TDP1-217ENST00000557782 PMCHP20382 165 aa3.11□□□□□ -1.91
TDP1-217ENST00000557782 CHRNB4P30926 498 aa3.11□□□□□ -1.91
TDP1-217ENST00000557782 HTR1FP30939 366 aa3.11□□□□□ -1.91
TDP1-217ENST00000557782 DDOSTP39656 456 aa3.11□□□□□ -1.91
TDP1-217ENST00000557782 TNFSF9P41273 254 aa3.11□□□□□ -1.91
TDP1-217ENST00000557782 ARHGDIBP52566 201 aa3.11□□□□□ -1.91
TDP1-217ENST00000557782 PLK1P53350 603 aa3.11□□□□□ -1.91
TDP1-217ENST00000557782 FBXW4P57775 412 aa3.11□□□□□ -1.91
TDP1-217ENST00000557782 SLC10A7Q0GE19 358 aa3.11□□□□□ -1.91
TDP1-217ENST00000557782 SF3A2Q15428 464 aaKnown RBP3.11□□□□□ -1.91
TDP1-217ENST00000557782 SOHLH1Q5JUK2 328 aa3.11□□□□□ -1.91
TDP1-217ENST00000557782 SPECC1LQ69YQ0 1117 aa3.11□□□□□ -1.91
TDP1-217ENST00000557782 CLEC6AQ6EIG7 209 aa3.11□□□□□ -1.91
TDP1-217ENST00000557782 FAM53AQ6NSI3 398 aaPredicted RBP3.11□□□□□ -1.91
TDP1-217ENST00000557782 Q6ZRP5 223 aa3.11□□□□□ -1.91
TDP1-217ENST00000557782 NDUFAF7Q7L592 441 aa3.11□□□□□ -1.91
TDP1-217ENST00000557782 ASCL5Q7RTU5 278 aa3.11□□□□□ -1.91
TDP1-217ENST00000557782 ZFAND4Q86XD8 727 aa3.11□□□□□ -1.91
TDP1-217ENST00000557782 APOBEC3FQ8IUX4 373 aaKnown RBP3.11□□□□□ -1.91
TDP1-217ENST00000557782 DCUN1D3Q8IWE4 304 aa3.11□□□□□ -1.91
TDP1-217ENST00000557782 ZNF100Q8IYN0 542 aa3.11□□□□□ -1.91
TDP1-217ENST00000557782 MCOLN2Q8IZK6 566 aa3.11□□□□□ -1.91
TDP1-217ENST00000557782 SLC39A11Q8N1S5 342 aa3.11□□□□□ -1.91
TDP1-217ENST00000557782 SVOPLQ8N434 492 aa3.11□□□□□ -1.91
TDP1-217ENST00000557782 CSNK1A1LQ8N752 337 aa3.11□□□□□ -1.91
TDP1-217ENST00000557782 OR52E5Q8NH55 327 aa3.11□□□□□ -1.91
TDP1-217ENST00000557782 LYPD6BQ8NI32 183 aa3.11□□□□□ -1.91
TDP1-217ENST00000557782 ADAMTS16Q8TE57 1224 aa3.11□□□□□ -1.91
TDP1-217ENST00000557782 DDI1Q8WTU0 396 aa3.11□□□□□ -1.91
TDP1-217ENST00000557782 CCDC124Q96CT7 223 aaKnown RBP3.11□□□□□ -1.91
TDP1-217ENST00000557782 GMPPAQ96IJ6 420 aaPredicted RBP3.11□□□□□ -1.91
TDP1-217ENST00000557782 SORCS2Q96PQ0 1159 aa3.11□□□□□ -1.91
TDP1-217ENST00000557782 CYTH2Q99418 400 aa3.11□□□□□ -1.91
TDP1-217ENST00000557782 EPYCQ99645 322 aa3.11□□□□□ -1.91
TDP1-217ENST00000557782 MEIS3Q99687 375 aa3.11□□□□□ -1.91
TDP1-217ENST00000557782 SH3GL1Q99961 368 aa3.11□□□□□ -1.91
TDP1-217ENST00000557782 HINT2Q9BX68 163 aa3.11□□□□□ -1.91
TDP1-217ENST00000557782 TMEM59Q9BXS4 323 aa3.11□□□□□ -1.91
TDP1-217ENST00000557782 SLC29A3Q9BZD2 475 aa3.11□□□□□ -1.91
TDP1-217ENST00000557782 PRRG3Q9BZD7 231 aa3.11□□□□□ -1.91
TDP1-217ENST00000557782 ACTR3CQ9C0K3 210 aaPredicted RBP3.11□□□□□ -1.91
TDP1-217ENST00000557782 PARLQ9H300 379 aa3.11□□□□□ -1.91
TDP1-217ENST00000557782 CAB39LQ9H9S4 337 aa3.11□□□□□ -1.91
TDP1-217ENST00000557782 AMBNQ9NP70 447 aa3.11□□□□□ -1.91
TDP1-217ENST00000557782 FGF20Q9NP95 211 aaPredicted RBP3.11□□□□□ -1.91
TDP1-217ENST00000557782 TIGARQ9NQ88 270 aa3.11□□□□□ -1.91
TDP1-217ENST00000557782 B3GNT2Q9NY97 397 aa3.11□□□□□ -1.91
TDP1-217ENST00000557782 LSM7Q9UK45 103 aaKnown RBP3.11□□□□□ -1.91
TDP1-217ENST00000557782 SPATA2Q9UM82 520 aa3.11□□□□□ -1.91
TDP1-217ENST00000557782 DDX19BQ9UMR2 479 aa3.11□□□□□ -1.91
TDP1-217ENST00000557782 RNF24Q9Y225 148 aa3.11□□□□□ -1.91
TDP1-217ENST00000557782 RBMX2Q9Y388 322 aaKnown RBP3.11□□□□□ -1.91
TDP1-217ENST00000557782 L3MBTL1Q9Y468 752 aa3.11□□□□□ -1.91
TDP1-217ENST00000557782 IGHV4-30-2A0A087WSY4 118 aa3.1□□□□□ -1.91
TDP1-217ENST00000557782 LOC100131303A0A0U1RQF7 123 aa3.1□□□□□ -1.91
TDP1-217ENST00000557782 E9PQ18 207 aa3.1□□□□□ -1.91
TDP1-217ENST00000557782 GFYI3L273 518 aa3.1□□□□□ -1.91
TDP1-217ENST00000557782 CDC7O00311 574 aa3.1□□□□□ -1.91
TDP1-217ENST00000557782 NTN3O00634 580 aaPredicted RBP3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms