RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 SEMA6AQ9H2E6 1030 aa13.64□□□□□ -0.23
NEDD1-213ENST00000557644 RNF122Q9H9V4 155 aa13.64□□□□□ -0.23
NEDD1-213ENST00000557644 MAGED1Q9Y5V3 778 aaPredicted RBP13.64□□□□□ -0.23
NEDD1-213ENST00000557644 COL12A1Q99715 3063 aa13.64□□□□□ -0.23
NEDD1-213ENST00000557644 MBD3L4A6NDZ8 208 aaPredicted RBP13.64□□□□□ -0.23
NEDD1-213ENST00000557644 MBD3L3A6NE82 208 aaPredicted RBP13.64□□□□□ -0.23
NEDD1-213ENST00000557644 MBD3L5A6NJ08 208 aaPredicted RBP13.64□□□□□ -0.23
NEDD1-213ENST00000557644 DEAF1O75398 565 aaPredicted RBP13.64□□□□□ -0.23
NEDD1-213ENST00000557644 OR7A10O76100 309 aa13.64□□□□□ -0.23
NEDD1-213ENST00000557644 LDLRP01130 860 aa13.64□□□□□ -0.23
NEDD1-213ENST00000557644 FASP25445 335 aa13.64□□□□□ -0.23
NEDD1-213ENST00000557644 SF3B4Q15427 424 aaKnown RBP eCLIP13.64□□□□□ -0.232e-9■■■□□ 16.5
NEDD1-213ENST00000557644 MBD3L2Q8NHZ7 208 aaPredicted RBP13.64□□□□□ -0.23
NEDD1-213ENST00000557644 ZNF775Q96BV0 537 aaPredicted RBP13.64□□□□□ -0.23
NEDD1-213ENST00000557644 INTS12Q96CB8 462 aaKnown RBP13.64□□□□□ -0.23
NEDD1-213ENST00000557644 ZHX1-C8orf76Q96EF9 292 aa13.64□□□□□ -0.23
NEDD1-213ENST00000557644 PKP2Q99959 881 aa13.64□□□□□ -0.23
NEDD1-213ENST00000557644 AQP7P3A6NL99 342 aa13.63□□□□□ -0.23
NEDD1-213ENST00000557644 DNPH1O43598 174 aa13.63□□□□□ -0.23
NEDD1-213ENST00000557644 EIF1BO60739 113 aaKnown RBP13.63□□□□□ -0.23
NEDD1-213ENST00000557644 FZD7O75084 574 aa13.63□□□□□ -0.23
NEDD1-213ENST00000557644 E2F6O75461 281 aa13.63□□□□□ -0.23
NEDD1-213ENST00000557644 MT-ATP6P00846 226 aa13.63□□□□□ -0.23
NEDD1-213ENST00000557644 ASAH2BP0C7U1 165 aa13.63□□□□□ -0.23
NEDD1-213ENST00000557644 FOXF2Q12947 444 aa13.63□□□□□ -0.23
NEDD1-213ENST00000557644 ZNF770Q6IQ21 691 aaPredicted RBP13.63□□□□□ -0.23
NEDD1-213ENST00000557644 OR6S1Q8NH40 331 aa13.63□□□□□ -0.23
NEDD1-213ENST00000557644 PIGXQ8TBF5 258 aa13.63□□□□□ -0.23
NEDD1-213ENST00000557644 FKRPQ9H9S5 495 aa13.63□□□□□ -0.23
NEDD1-213ENST00000557644 ING1Q9UK53 422 aaPredicted RBP13.63□□□□□ -0.23
NEDD1-213ENST00000557644 CCNB2O95067 398 aa13.63□□□□□ -0.23
NEDD1-213ENST00000557644 IGF2P01344 180 aa13.63□□□□□ -0.23
NEDD1-213ENST00000557644 SAGP10523 405 aaPredicted RBP13.63□□□□□ -0.23
NEDD1-213ENST00000557644 ELF3P78545 371 aaPredicted RBP13.63□□□□□ -0.23
NEDD1-213ENST00000557644 MICAQ29983 383 aa13.63□□□□□ -0.23
NEDD1-213ENST00000557644 ABLIM2Q6H8Q1 611 aa13.63□□□□□ -0.23
NEDD1-213ENST00000557644 PGBD2Q6P3X8 592 aa13.63□□□□□ -0.23
NEDD1-213ENST00000557644 H1FNTQ75WM6 255 aaPredicted RBP13.63□□□□□ -0.23
NEDD1-213ENST00000557644 MAMDC2Q7Z304 686 aaPredicted RBP13.63□□□□□ -0.23
NEDD1-213ENST00000557644 GPAT4Q86UL3 456 aa13.63□□□□□ -0.23
NEDD1-213ENST00000557644 MED12LQ86YW9 2145 aa13.63□□□□□ -0.23
NEDD1-213ENST00000557644 STMN2Q93045 179 aa13.63□□□□□ -0.23
NEDD1-213ENST00000557644 ASPNQ9BXN1 380 aa13.63□□□□□ -0.23
NEDD1-213ENST00000557644 CHST11Q9NPF2 352 aa13.63□□□□□ -0.23
NEDD1-213ENST00000557644 ZNF229Q9UJW7 825 aa13.63□□□□□ -0.23
NEDD1-213ENST00000557644 DIDO1Q9BTC0 2240 aaKnown RBP13.62□□□□□ -0.23
NEDD1-213ENST00000557644 TRAV27A0A087WT01 109 aa13.62□□□□□ -0.23
NEDD1-213ENST00000557644 CYTIPO60759 359 aa13.62□□□□□ -0.23
NEDD1-213ENST00000557644 POU2F1P14859 743 aa13.62□□□□□ -0.23
NEDD1-213ENST00000557644 PRKACGP22612 351 aa13.62□□□□□ -0.23
NEDD1-213ENST00000557644 DNAJA1P31689 397 aaKnown RBP13.62□□□□□ -0.23
NEDD1-213ENST00000557644 TIMP3P35625 211 aa13.62□□□□□ -0.23
NEDD1-213ENST00000557644 PER3P56645 1201 aa13.62□□□□□ -0.23
NEDD1-213ENST00000557644 RASGEF1BQ0VAM2 473 aa13.62□□□□□ -0.23
NEDD1-213ENST00000557644 C4orf17Q53FE4 359 aa13.62□□□□□ -0.23
NEDD1-213ENST00000557644 OR13C2Q8NGS9 318 aa13.62□□□□□ -0.23
NEDD1-213ENST00000557644 OR5J2Q8NH18 312 aa13.62□□□□□ -0.23
NEDD1-213ENST00000557644 CCDC120Q96HB5 630 aa13.62□□□□□ -0.23
NEDD1-213ENST00000557644 TM9SF2Q99805 663 aa13.62□□□□□ -0.23
NEDD1-213ENST00000557644 PSD2Q9BQI7 771 aa13.62□□□□□ -0.23
NEDD1-213ENST00000557644 NAA11Q9BSU3 229 aaPredicted RBP13.62□□□□□ -0.23
NEDD1-213ENST00000557644 MRPL39Q9NYK5 338 aaKnown RBP13.62□□□□□ -0.23
NEDD1-213ENST00000557644 ERRFI1Q9UJM3 462 aaPredicted RBP13.62□□□□□ -0.23
NEDD1-213ENST00000557644 CORINQ9Y5Q5 1042 aa13.62□□□□□ -0.23
NEDD1-213ENST00000557644 DOCK7Q96N67 2140 aa13.62□□□□□ -0.23
NEDD1-213ENST00000557644 A0A0G2JNJ9 132 aa13.61□□□□□ -0.23
NEDD1-213ENST00000557644 EFCAB9A8MZ26 197 aa13.61□□□□□ -0.23
NEDD1-213ENST00000557644 MS4A18H0YCH9 400 aa13.61□□□□□ -0.23
NEDD1-213ENST00000557644 BLOC1S5-TXNDC5H3BN57 136 aa13.61□□□□□ -0.23
NEDD1-213ENST00000557644 RCBTB2O95199 551 aa13.61□□□□□ -0.23
NEDD1-213ENST00000557644 HPRP00739 348 aa13.61□□□□□ -0.23
NEDD1-213ENST00000557644 GASTP01350 101 aa13.61□□□□□ -0.23
NEDD1-213ENST00000557644 IL2RAP01589 272 aa13.61□□□□□ -0.23
NEDD1-213ENST00000557644 FCGR1AP12314 374 aa13.61□□□□□ -0.23
NEDD1-213ENST00000557644 FCGR2AP12318 317 aa13.61□□□□□ -0.23
NEDD1-213ENST00000557644 PMS2P3Q13401 168 aa13.61□□□□□ -0.23
NEDD1-213ENST00000557644 MFSD13AQ14CX5 517 aa13.61□□□□□ -0.23
NEDD1-213ENST00000557644 MS4A18Q3C1V0 323 aa13.61□□□□□ -0.23
NEDD1-213ENST00000557644 ANKRD34AQ69YU3 496 aa13.61□□□□□ -0.23
NEDD1-213ENST00000557644 TMEM225Q6GV28 225 aa13.61□□□□□ -0.23
NEDD1-213ENST00000557644 TMPRSS11FQ6ZWK6 438 aa13.61□□□□□ -0.23
NEDD1-213ENST00000557644 C10orf67Q8IYJ2 551 aa13.61□□□□□ -0.23
NEDD1-213ENST00000557644 CDK20Q8IZL9 346 aa13.61□□□□□ -0.23
NEDD1-213ENST00000557644 AQP11Q8NBQ7 271 aa13.61□□□□□ -0.23
NEDD1-213ENST00000557644 OR51A7Q8NH64 312 aa13.61□□□□□ -0.23
NEDD1-213ENST00000557644 TAS2R5Q9NYW4 299 aa13.61□□□□□ -0.23
NEDD1-213ENST00000557644 PDP1Q9P0J1 537 aaPredicted RBP13.61□□□□□ -0.23
NEDD1-213ENST00000557644 B3GAT1Q9P2W7 334 aa13.61□□□□□ -0.23
NEDD1-213ENST00000557644 Q9UFV3 132 aa13.61□□□□□ -0.23
NEDD1-213ENST00000557644 B3GALT5Q9Y2C3 310 aa13.61□□□□□ -0.23
NEDD1-213ENST00000557644 A0A1B0GUH1 482 aa13.61□□□□□ -0.23
NEDD1-213ENST00000557644 ZNF716A6NP11 495 aa13.61□□□□□ -0.23
NEDD1-213ENST00000557644 PLPP3O14495 311 aa13.61□□□□□ -0.23
NEDD1-213ENST00000557644 KLF4O43474 513 aa13.61□□□□□ -0.23
NEDD1-213ENST00000557644 HLA-DOBP13765 273 aa13.61□□□□□ -0.23
NEDD1-213ENST00000557644 CEACAM8P31997 349 aaPredicted RBP13.61□□□□□ -0.23
NEDD1-213ENST00000557644 ADORA2A-AS1P86434 159 aa13.61□□□□□ -0.23
NEDD1-213ENST00000557644 FHL1Q13642 323 aa13.61□□□□□ -0.23
NEDD1-213ENST00000557644 SLC17A1Q14916 467 aa13.61□□□□□ -0.23
NEDD1-213ENST00000557644 CCDC71Q8IV32 467 aaPredicted RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms