RNA–Protein interactions for RNA: ENST00000557320.5

PAPOLA-223, Transcript of poly(A) polymerase alpha, human

TSL 1 (best) BASIC

Gene PAPOLA, Length 3,264 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAPOLA-223	ENST00000557320	NME2	P22392	152 aa		13.79	□□□□□ -0.2
PAPOLA-223	ENST00000557320	MC1R	Q01726	317 aa		13.79	□□□□□ -0.2
PAPOLA-223	ENST00000557320	PJVK	Q0ZLH3	352 aa		13.79	□□□□□ -0.2
PAPOLA-223	ENST00000557320	OR2F1	Q13607	317 aa		13.79	□□□□□ -0.2
PAPOLA-223	ENST00000557320	UBE2R2	Q712K3	238 aa	Predicted RBP	13.79	□□□□□ -0.2
PAPOLA-223	ENST00000557320	OR51S1	Q8NGJ8	323 aa		13.79	□□□□□ -0.2
PAPOLA-223	ENST00000557320	PHYHIPL	Q96FC7	376 aa		13.79	□□□□□ -0.2
PAPOLA-223	ENST00000557320	ZNF354B	Q96LW1	612 aa		13.79	□□□□□ -0.2
PAPOLA-223	ENST00000557320	GPA33	Q99795	319 aa		13.79	□□□□□ -0.2
PAPOLA-223	ENST00000557320	NDC1	Q9BTX1	674 aa		13.79	□□□□□ -0.2
PAPOLA-223	ENST00000557320	GPR62	Q9BZJ7	368 aa		13.79	□□□□□ -0.2
PAPOLA-223	ENST00000557320	METTL9	Q9H1A3	318 aa		13.79	□□□□□ -0.2
PAPOLA-223	ENST00000557320	SMOC1	Q9H4F8	434 aa		13.79	□□□□□ -0.2
PAPOLA-223	ENST00000557320	DNAJB11	Q9UBS4	358 aa		13.79	□□□□□ -0.2
PAPOLA-223	ENST00000557320	PLXNA3	P51805	1871 aa		13.78	□□□□□ -0.2
PAPOLA-223	ENST00000557320	CPSF4L	A6NMK7	179 aa	Known RBP	13.78	□□□□□ -0.2
PAPOLA-223	ENST00000557320	CCS	O14618	274 aa		13.78	□□□□□ -0.2
PAPOLA-223	ENST00000557320	SBK2	P0C263	348 aa		13.78	□□□□□ -0.2
PAPOLA-223	ENST00000557320	RHOQ	P17081	205 aa		13.78	□□□□□ -0.2
PAPOLA-223	ENST00000557320	IGFBP6	P24592	240 aa	Predicted RBP	13.78	□□□□□ -0.2
PAPOLA-223	ENST00000557320	RBM34	P42696	430 aa	Known RBP	13.78	□□□□□ -0.2
PAPOLA-223	ENST00000557320	RING1	Q06587	406 aa		13.78	□□□□□ -0.2
PAPOLA-223	ENST00000557320	CBFB	Q13951	182 aa		13.78	□□□□□ -0.2
PAPOLA-223	ENST00000557320	ARSI	Q5FYB1	569 aa		13.78	□□□□□ -0.2
PAPOLA-223	ENST00000557320	AKR1E2	Q96JD6	320 aa		13.78	□□□□□ -0.2
PAPOLA-223	ENST00000557320	NECAB3	Q96P71	396 aa	Predicted RBP	13.78	□□□□□ -0.2
PAPOLA-223	ENST00000557320	C2orf88	Q9BSF0	95 aa		13.78	□□□□□ -0.2
PAPOLA-223	ENST00000557320	LHX9	Q9NQ69	397 aa		13.78	□□□□□ -0.2
PAPOLA-223	ENST00000557320	PCDHB8	Q9UN66	801 aa		13.78	□□□□□ -0.2
PAPOLA-223	ENST00000557320	NOP16	Q9Y3C1	178 aa	Known RBP	13.78	□□□□□ -0.2
PAPOLA-223	ENST00000557320	ZC3H12D	A2A288	527 aa	Known RBP	13.78	□□□□□ -0.2
PAPOLA-223	ENST00000557320	FGF19	O95750	216 aa		13.78	□□□□□ -0.2
PAPOLA-223	ENST00000557320	ARAF	P10398	606 aa		13.78	□□□□□ -0.2
PAPOLA-223	ENST00000557320	UQCRC2	P22695	453 aa		13.78	□□□□□ -0.2
PAPOLA-223	ENST00000557320	ST8SIA6	P61647	398 aa		13.78	□□□□□ -0.2
PAPOLA-223	ENST00000557320	TDG	Q13569	410 aa		13.78	□□□□□ -0.2
PAPOLA-223	ENST00000557320	MRPL58	Q14197	206 aa	Known RBP	13.78	□□□□□ -0.2
PAPOLA-223	ENST00000557320	MAPK14	Q16539	360 aa		13.78	□□□□□ -0.2
PAPOLA-223	ENST00000557320	ZNF239	Q16600	458 aa	Known RBP	13.78	□□□□□ -0.2
PAPOLA-223	ENST00000557320	OLFML2A	Q68BL7	652 aa		13.78	□□□□□ -0.2
PAPOLA-223	ENST00000557320	GAREM2	Q75VX8	874 aa		13.78	□□□□□ -0.2
PAPOLA-223	ENST00000557320	SCD5	Q86SK9	330 aa		13.78	□□□□□ -0.2
PAPOLA-223	ENST00000557320	PARG	Q86W56	976 aa		13.78	□□□□□ -0.2
PAPOLA-223	ENST00000557320	ZNF485	Q8NCK3	441 aa		13.78	□□□□□ -0.2
PAPOLA-223	ENST00000557320	STEAP2	Q8NFT2	490 aa		13.78	□□□□□ -0.2
PAPOLA-223	ENST00000557320	OR7G2	Q8NG99	324 aa		13.78	□□□□□ -0.2
PAPOLA-223	ENST00000557320	OR4A4P	Q8NGN8	299 aa		13.78	□□□□□ -0.2
PAPOLA-223	ENST00000557320	CDCA3	Q99618	268 aa	Predicted RBP	13.78	□□□□□ -0.2
PAPOLA-223	ENST00000557320	MICU1	Q9BPX6	476 aa		13.78	□□□□□ -0.2
PAPOLA-223	ENST00000557320	TRIM62	Q9BVG3	475 aa		13.78	□□□□□ -0.2
PAPOLA-223	ENST00000557320	PRDM13	Q9H4Q3	707 aa		13.78	□□□□□ -0.2
PAPOLA-223	ENST00000557320	TRPV4	Q9HBA0	871 aa		13.78	□□□□□ -0.2
PAPOLA-223	ENST00000557320	RCC2	Q9P258	522 aa	Known RBP	13.78	□□□□□ -0.2
PAPOLA-223	ENST00000557320	KCND3	Q9UK17	655 aa		13.78	□□□□□ -0.2
PAPOLA-223	ENST00000557320	MEIS3P1	A6NDR6	274 aa		13.77	□□□□□ -0.2
PAPOLA-223	ENST00000557320	MCIDAS	D6RGH6	385 aa		13.77	□□□□□ -0.2
PAPOLA-223	ENST00000557320	KCNAB3	O43448	404 aa		13.77	□□□□□ -0.2
PAPOLA-223	ENST00000557320	MT-ND5	P03915	603 aa		13.77	□□□□□ -0.2
PAPOLA-223	ENST00000557320	CD53	P19397	219 aa		13.77	□□□□□ -0.2
PAPOLA-223	ENST00000557320	CDK5	Q00535	292 aa		13.77	□□□□□ -0.2
PAPOLA-223	ENST00000557320	LBH	Q53QV2	105 aa	Predicted RBP	13.77	□□□□□ -0.2
PAPOLA-223	ENST00000557320	SCN4B	Q8IWT1	228 aa		13.77	□□□□□ -0.2
PAPOLA-223	ENST00000557320	RGCC	Q9H4X1	137 aa		13.77	□□□□□ -0.2
PAPOLA-223	ENST00000557320	MRPS18A	Q9NVS2	196 aa	Known RBP	13.77	□□□□□ -0.2
PAPOLA-223	ENST00000557320	CRLS1	Q9UJA2	301 aa		13.77	□□□□□ -0.2
PAPOLA-223	ENST00000557320	LAMP5	Q9UJQ1	280 aa		13.77	□□□□□ -0.2
PAPOLA-223	ENST00000557320		A0A0G2JK05	382 aa		13.77	□□□□□ -0.21
PAPOLA-223	ENST00000557320	RNASEK-C17orf49	H0YIS7	233 aa		13.77	□□□□□ -0.21
PAPOLA-223	ENST00000557320	SAP18	O00422	153 aa	Known RBP	13.77	□□□□□ -0.21
PAPOLA-223	ENST00000557320	RBBP9	O75884	186 aa		13.77	□□□□□ -0.21
PAPOLA-223	ENST00000557320	B3GAT3	O94766	335 aa		13.77	□□□□□ -0.21
PAPOLA-223	ENST00000557320	PAPLN	O95428	1278 aa		13.77	□□□□□ -0.21
PAPOLA-223	ENST00000557320	SNRPC	P09234	159 aa	Known RBP	13.77	□□□□□ -0.21
PAPOLA-223	ENST00000557320	GAA	P10253	952 aa		13.77	□□□□□ -0.21
PAPOLA-223	ENST00000557320	TYMP	P19971	482 aa		13.77	□□□□□ -0.21
PAPOLA-223	ENST00000557320	HOXA6	P31267	233 aa		13.77	□□□□□ -0.21
PAPOLA-223	ENST00000557320	PPA1	Q15181	289 aa		13.77	□□□□□ -0.21
PAPOLA-223	ENST00000557320	ZNF385B	Q569K4	471 aa		13.77	□□□□□ -0.21
PAPOLA-223	ENST00000557320	PRAMEF17	Q5VTA0	474 aa		13.77	□□□□□ -0.21
PAPOLA-223	ENST00000557320	KHDRBS2	Q5VWX1	349 aa	Known RBP	13.77	□□□□□ -0.21
PAPOLA-223	ENST00000557320	ACOT7L	Q6ZUV0	252 aa		13.77	□□□□□ -0.21
PAPOLA-223	ENST00000557320	NDUFAF7	Q7L592	441 aa		13.77	□□□□□ -0.21
PAPOLA-223	ENST00000557320	NRROS	Q86YC3	692 aa		13.77	□□□□□ -0.21
PAPOLA-223	ENST00000557320	LRRC56	Q8IYG6	542 aa	Predicted RBP	13.77	□□□□□ -0.21
PAPOLA-223	ENST00000557320	MRPL43	Q8N983	215 aa	Known RBP	13.77	□□□□□ -0.21
PAPOLA-223	ENST00000557320	GHSR	Q92847	366 aa		13.77	□□□□□ -0.21
PAPOLA-223	ENST00000557320	TMEM19	Q96HH6	336 aa		13.77	□□□□□ -0.21
PAPOLA-223	ENST00000557320	OR51V1	Q9H2C8	321 aa		13.77	□□□□□ -0.21
PAPOLA-223	ENST00000557320	CRLF2	Q9HC73	371 aa		13.77	□□□□□ -0.21
PAPOLA-223	ENST00000557320	SIRT7	Q9NRC8	400 aa		13.77	□□□□□ -0.21
PAPOLA-223	ENST00000557320	CHD7	Q9P2D1	2997 aa		13.77	□□□□□ -0.21
PAPOLA-223	ENST00000557320	TRANK1	O15050	2925 aa		13.77	□□□□□ -0.21
PAPOLA-223	ENST00000557320		A0A0B4J2A0	478 aa		13.77	□□□□□ -0.21
PAPOLA-223	ENST00000557320	SLC2A10	O95528	541 aa		13.77	□□□□□ -0.21
PAPOLA-223	ENST00000557320	GNS	P15586	552 aa		13.77	□□□□□ -0.21
PAPOLA-223	ENST00000557320	RAB4A	P20338	218 aa		13.77	□□□□□ -0.21
PAPOLA-223	ENST00000557320	GSTM3	P21266	225 aa		13.77	□□□□□ -0.21
PAPOLA-223	ENST00000557320	ACKR3	P25106	362 aa		13.77	□□□□□ -0.21
PAPOLA-223	ENST00000557320	OPRD1	P41143	372 aa		13.77	□□□□□ -0.21
PAPOLA-223	ENST00000557320	BUD31	P41223	144 aa	Predicted RBP	13.77	□□□□□ -0.21

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