RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 WNT11O96014 354 aa15.98■□□□□ 0.15
PTPN21-208ENST00000556564 ELAVL4P26378 380 aaKnown RBP15.98■□□□□ 0.15
PTPN21-208ENST00000556564 TCTN3Q6NUS6 607 aa15.98■□□□□ 0.15
PTPN21-208ENST00000556564 ANKRD53Q8N9V6 530 aa15.98■□□□□ 0.15
PTPN21-208ENST00000556564 CSNK2A3Q8NEV1 391 aa15.98■□□□□ 0.15
PTPN21-208ENST00000556564 OR5H2Q8NGV7 314 aa15.98■□□□□ 0.15
PTPN21-208ENST00000556564 GPBAR1Q8TDU6 330 aa15.98■□□□□ 0.15
PTPN21-208ENST00000556564 SDF2Q99470 211 aa15.98■□□□□ 0.15
PTPN21-208ENST00000556564 MMP27Q9H306 513 aa15.98■□□□□ 0.15
PTPN21-208ENST00000556564 ASIC5Q9NY37 505 aa15.98■□□□□ 0.15
PTPN21-208ENST00000556564 EBF1Q9UH73 591 aa15.98■□□□□ 0.15
PTPN21-208ENST00000556564 SMCO3A2RU48 225 aa15.97■□□□□ 0.15
PTPN21-208ENST00000556564 MOSPD3O75425 235 aa15.97■□□□□ 0.15
PTPN21-208ENST00000556564 LRRC37A5PQ49AS3 106 aa15.97■□□□□ 0.15
PTPN21-208ENST00000556564 NT5CQ8TCD5 201 aa15.97■□□□□ 0.15
PTPN21-208ENST00000556564 TMEM38AQ9H6F2 299 aa15.97■□□□□ 0.15
PTPN21-208ENST00000556564 NUDT15Q9NV35 164 aa15.97■□□□□ 0.15
PTPN21-208ENST00000556564 PLA2G3Q9NZ20 509 aa15.97■□□□□ 0.15
PTPN21-208ENST00000556564 IGHV3-15A0A0B4J1V0 119 aa15.97■□□□□ 0.15
PTPN21-208ENST00000556564 AKR1C4P17516 323 aa15.97■□□□□ 0.15
PTPN21-208ENST00000556564 APOBEC1P41238 236 aaKnown RBP15.97■□□□□ 0.15
PTPN21-208ENST00000556564 OR6Q1Q8NGQ2 317 aa15.97■□□□□ 0.15
PTPN21-208ENST00000556564 OR1J2Q8NGS2 313 aa15.97■□□□□ 0.15
PTPN21-208ENST00000556564 ASB17Q8WXJ9 295 aa15.97■□□□□ 0.15
PTPN21-208ENST00000556564 MICU1Q9BPX6 476 aa15.97■□□□□ 0.15
PTPN21-208ENST00000556564 MBD2Q9UBB5 411 aa15.97■□□□□ 0.15
PTPN21-208ENST00000556564 ZNFX1Q9P2E3 1918 aaKnown RBP15.97■□□□□ 0.15
PTPN21-208ENST00000556564 IGHV1OR21-1A0A087WYE8 117 aa15.97■□□□□ 0.15
PTPN21-208ENST00000556564 TNFSF11O14788 317 aa15.97■□□□□ 0.15
PTPN21-208ENST00000556564 STOMP27105 288 aa15.97■□□□□ 0.15
PTPN21-208ENST00000556564 FAM53BQ14153 422 aa15.97■□□□□ 0.15
PTPN21-208ENST00000556564 B3GNT8Q7Z7M8 397 aa15.97■□□□□ 0.15
PTPN21-208ENST00000556564 ALG12Q9BV10 488 aa15.97■□□□□ 0.15
PTPN21-208ENST00000556564 PPIL1Q9Y3C6 166 aa15.97■□□□□ 0.15
PTPN21-208ENST00000556564 A0A1W2PNR3 127 aa15.97■□□□□ 0.15
PTPN21-208ENST00000556564 DAPP51397 102 aa15.97■□□□□ 0.15
PTPN21-208ENST00000556564 VASH2Q86V25 355 aa15.97■□□□□ 0.15
PTPN21-208ENST00000556564 FUNDC1Q8IVP5 155 aa15.97■□□□□ 0.15
PTPN21-208ENST00000556564 NUP50Q9UKX7 468 aa15.97■□□□□ 0.15
PTPN21-208ENST00000556564 ZNF44P15621 663 aa15.96■□□□□ 0.15
PTPN21-208ENST00000556564 DUSP22Q9NRW4 184 aa15.96■□□□□ 0.15
PTPN21-208ENST00000556564 B3GALT1Q9Y5Z6 326 aa15.96■□□□□ 0.15
PTPN21-208ENST00000556564 METTL15A6NJ78 407 aa15.96■□□□□ 0.15
PTPN21-208ENST00000556564 B4GAT1O43505 415 aa15.96■□□□□ 0.15
PTPN21-208ENST00000556564 OR8G3PP0DMU2 310 aa15.96■□□□□ 0.15
PTPN21-208ENST00000556564 UQCRC1P31930 480 aa15.96■□□□□ 0.15
PTPN21-208ENST00000556564 ADARB1P78563 741 aaKnown RBP15.96■□□□□ 0.15
PTPN21-208ENST00000556564 SLC22A6Q4U2R8 563 aa15.96■□□□□ 0.15
PTPN21-208ENST00000556564 ZNF420Q8TAQ5 688 aaPredicted RBP15.96■□□□□ 0.15
PTPN21-208ENST00000556564 TRIP11Q15643 1979 aa15.96■□□□□ 0.15
PTPN21-208ENST00000556564 TNFSF14O43557 240 aa15.96■□□□□ 0.15
PTPN21-208ENST00000556564 ATXN7L3Q14CW9 347 aaPredicted RBP15.96■□□□□ 0.15
PTPN21-208ENST00000556564 ACSM3Q53FZ2 586 aa15.96■□□□□ 0.15
PTPN21-208ENST00000556564 ABHD11Q8NFV4 315 aa15.96■□□□□ 0.15
PTPN21-208ENST00000556564 PPP1R35Q8TAP8 253 aa15.96■□□□□ 0.15
PTPN21-208ENST00000556564 UBE2J1Q9Y385 318 aaPredicted RBP15.96■□□□□ 0.15
PTPN21-208ENST00000556564 RBBP6Q7Z6E9 1792 aaKnown RBP15.96■□□□□ 0.15
PTPN21-208ENST00000556564 TMEM72A0PK05 275 aa15.96■□□□□ 0.15
PTPN21-208ENST00000556564 TRAPPC2LH3BP13 241 aa15.96■□□□□ 0.15
PTPN21-208ENST00000556564 RNF4P78317 190 aa15.96■□□□□ 0.15
PTPN21-208ENST00000556564 TRA2AQ13595 282 aaKnown RBP eCLIP15.96■□□□□ 0.15
PTPN21-208ENST00000556564 ZNF691Q5VV52 312 aa15.96■□□□□ 0.15
PTPN21-208ENST00000556564 BAIAP2L2Q6UXY1 529 aa15.96■□□□□ 0.15
PTPN21-208ENST00000556564 DCDC5Q6ZRR9 648 aa15.96■□□□□ 0.15
PTPN21-208ENST00000556564 CCDC36Q8IYA8 594 aa15.96■□□□□ 0.15
PTPN21-208ENST00000556564 ZNF417Q8TAU3 575 aa15.96■□□□□ 0.15
PTPN21-208ENST00000556564 UBAP1Q9NZ09 502 aa15.96■□□□□ 0.15
PTPN21-208ENST00000556564 LSSP48449 732 aa15.96■□□□□ 0.14
PTPN21-208ENST00000556564 LRRC3BQ96PB8 259 aa15.96■□□□□ 0.14
PTPN21-208ENST00000556564 MSL3P1P0C860 447 aa15.95■□□□□ 0.14
PTPN21-208ENST00000556564 H1FNTQ75WM6 255 aaPredicted RBP15.95■□□□□ 0.14
PTPN21-208ENST00000556564 ERVK13-1Q9NX77 482 aa15.95■□□□□ 0.14
PTPN21-208ENST00000556564 NUP205Q92621 2012 aa15.95■□□□□ 0.14
PTPN21-208ENST00000556564 KLK8O60259 260 aa15.95■□□□□ 0.14
PTPN21-208ENST00000556564 ACP2P11117 423 aa15.95■□□□□ 0.14
PTPN21-208ENST00000556564 EMC6Q9BV81 110 aa15.95■□□□□ 0.14
PTPN21-208ENST00000556564 HHLA2Q9UM44 414 aa15.95■□□□□ 0.14
PTPN21-208ENST00000556564 ST14Q9Y5Y6 855 aa15.95■□□□□ 0.14
PTPN21-208ENST00000556564 MEGF11A6BM72 1044 aa15.95■□□□□ 0.14
PTPN21-208ENST00000556564 OR6C70A6NIJ9 312 aa15.95■□□□□ 0.14
PTPN21-208ENST00000556564 ABHD16AO95870 558 aa15.95■□□□□ 0.14
PTPN21-208ENST00000556564 ITGB2P05107 769 aa15.95■□□□□ 0.14
PTPN21-208ENST00000556564 ARSBP15848 533 aa15.95■□□□□ 0.14
PTPN21-208ENST00000556564 PPICP45877 212 aa15.95■□□□□ 0.14
PTPN21-208ENST00000556564 PPP1CAP62136 330 aa15.95■□□□□ 0.14
PTPN21-208ENST00000556564 ANKRD60Q9BZ19 345 aa15.95■□□□□ 0.14
PTPN21-208ENST00000556564 WWTR1Q9GZV5 400 aa15.95■□□□□ 0.14
PTPN21-208ENST00000556564 CHRNA9Q9UGM1 479 aa15.95■□□□□ 0.14
PTPN21-208ENST00000556564 MEIS3P1A6NDR6 274 aa15.95■□□□□ 0.14
PTPN21-208ENST00000556564 MPPED1O15442 326 aa15.95■□□□□ 0.14
PTPN21-208ENST00000556564 GNAO1P09471 354 aa15.95■□□□□ 0.14
PTPN21-208ENST00000556564 CHRNB1P11230 501 aa15.95■□□□□ 0.14
PTPN21-208ENST00000556564 KIR2DL1P43626 348 aaPredicted RBP15.95■□□□□ 0.14
PTPN21-208ENST00000556564 ATP1B3P54709 279 aa15.95■□□□□ 0.14
PTPN21-208ENST00000556564 ZMYND11Q15326 602 aa15.95■□□□□ 0.14
PTPN21-208ENST00000556564 SYT4Q9H2B2 425 aa15.95■□□□□ 0.14
PTPN21-208ENST00000556564 SIDT1Q9NXL6 827 aaKnown RBP15.95■□□□□ 0.14
PTPN21-208ENST00000556564 PCDHGA1Q9Y5H4 931 aa15.95■□□□□ 0.14
PTPN21-208ENST00000556564 UGT2A3Q6UWM9 527 aa15.95■□□□□ 0.14
PTPN21-208ENST00000556564 ZBTB8BQ8NAP8 495 aaPredicted RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms