RNA–Protein interactions for RNA: ENST00000556288.5

ATXN3-238, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 901 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-238ENST00000556288 CD1EP15812 388 aa4.18□□□□□ -1.74
ATXN3-238ENST00000556288 BTF3P20290 206 aaKnown RBP4.18□□□□□ -1.74
ATXN3-238ENST00000556288 ME2P23368 584 aa4.18□□□□□ -1.74
ATXN3-238ENST00000556288 HTR1EP28566 365 aa4.18□□□□□ -1.74
ATXN3-238ENST00000556288 UQCRC1P31930 480 aa4.18□□□□□ -1.74
ATXN3-238ENST00000556288 SFTPDP35247 375 aa4.18□□□□□ -1.74
ATXN3-238ENST00000556288 ZFP36L2P47974 494 aaKnown RBP4.18□□□□□ -1.74
ATXN3-238ENST00000556288 P2RX1P51575 399 aa4.18□□□□□ -1.74
ATXN3-238ENST00000556288 GAS1P54826 345 aa4.18□□□□□ -1.74
ATXN3-238ENST00000556288 CLDN15P56746 228 aa4.18□□□□□ -1.74
ATXN3-238ENST00000556288 EEFSECP57772 596 aaKnown RBP4.18□□□□□ -1.74
ATXN3-238ENST00000556288 C21orf58P58505 322 aa4.18□□□□□ -1.74
ATXN3-238ENST00000556288 RPS3AP61247 264 aaKnown RBP4.18□□□□□ -1.74
ATXN3-238ENST00000556288 SNTB1Q13884 538 aaKnown RBP4.18□□□□□ -1.74
ATXN3-238ENST00000556288 GNA13Q14344 377 aa4.18□□□□□ -1.74
ATXN3-238ENST00000556288 CAPRIN1Q14444 709 aaKnown RBP4.18□□□□□ -1.74
ATXN3-238ENST00000556288 ZNF630Q2M218 657 aaPredicted RBP4.18□□□□□ -1.74
ATXN3-238ENST00000556288 HYAL4Q2M3T9 481 aa4.18□□□□□ -1.74
ATXN3-238ENST00000556288 TMEM176BQ3YBM2 270 aaPredicted RBP4.18□□□□□ -1.74
ATXN3-238ENST00000556288 GTDC1Q4AE62 458 aa4.18□□□□□ -1.74
ATXN3-238ENST00000556288 PAGE3Q5JUK9 113 aa4.18□□□□□ -1.74
ATXN3-238ENST00000556288 ZNF362Q5T0B9 420 aaPredicted RBP4.18□□□□□ -1.74
ATXN3-238ENST00000556288 DCST1Q5T197 706 aa4.18□□□□□ -1.74
ATXN3-238ENST00000556288 SAXO2Q658L1 398 aa4.18□□□□□ -1.74
ATXN3-238ENST00000556288 XKRXQ6PP77 449 aa4.18□□□□□ -1.74
ATXN3-238ENST00000556288 EIF3MQ7L2H7 374 aaKnown RBP4.18□□□□□ -1.74
ATXN3-238ENST00000556288 ZNF771Q7L3S4 317 aaPredicted RBP4.18□□□□□ -1.74
ATXN3-238ENST00000556288 CAMKMTQ7Z624 323 aa4.18□□□□□ -1.74
ATXN3-238ENST00000556288 GRAMD2AQ8IUY3 354 aa4.18□□□□□ -1.74
ATXN3-238ENST00000556288 LIX1LQ8IVB5 337 aa4.18□□□□□ -1.74
ATXN3-238ENST00000556288 FUNDC1Q8IVP5 155 aa4.18□□□□□ -1.74
ATXN3-238ENST00000556288 MCEMP1Q8IX19 187 aa4.18□□□□□ -1.74
ATXN3-238ENST00000556288 PEX5LQ8IYB4 626 aa4.18□□□□□ -1.74
ATXN3-238ENST00000556288 PM20D2Q8IYS1 436 aa4.18□□□□□ -1.74
ATXN3-238ENST00000556288 ZNF619Q8N2I2 560 aa4.18□□□□□ -1.74
ATXN3-238ENST00000556288 CADM2Q8N3J6 435 aa4.18□□□□□ -1.74
ATXN3-238ENST00000556288 RPRMLQ8N4K4 120 aa4.18□□□□□ -1.74
ATXN3-238ENST00000556288 CNEP1R1Q8N9A8 125 aa4.18□□□□□ -1.74
ATXN3-238ENST00000556288 TNIP2Q8NFZ5 429 aa4.18□□□□□ -1.74
ATXN3-238ENST00000556288 OR52P1PQ8NH57 321 aa4.18□□□□□ -1.74
ATXN3-238ENST00000556288 NFKBIDQ8NI38 313 aa4.18□□□□□ -1.74
ATXN3-238ENST00000556288 PSMA8Q8TAA3 256 aa4.18□□□□□ -1.74
ATXN3-238ENST00000556288 FAM110BQ8TC76 370 aa4.18□□□□□ -1.74
ATXN3-238ENST00000556288 SLC26A7Q8TE54 656 aa4.18□□□□□ -1.74
ATXN3-238ENST00000556288 ZFP90Q8TF47 636 aa4.18□□□□□ -1.74
ATXN3-238ENST00000556288 INTS12Q96CB8 462 aaKnown RBP4.18□□□□□ -1.74
ATXN3-238ENST00000556288 NEURL3Q96EH8 262 aa4.18□□□□□ -1.74
ATXN3-238ENST00000556288 WDYHV1Q96HA8 205 aa4.18□□□□□ -1.74
ATXN3-238ENST00000556288 REXO5Q96IC2 774 aaKnown RBP4.18□□□□□ -1.74
ATXN3-238ENST00000556288 ECSITQ9BQ95 431 aa4.18□□□□□ -1.74
ATXN3-238ENST00000556288 PIGQQ9BRB3 760 aa4.18□□□□□ -1.74
ATXN3-238ENST00000556288 SIKE1Q9BRV8 207 aa4.18□□□□□ -1.74
ATXN3-238ENST00000556288 TTYH2Q9BSA4 534 aa4.18□□□□□ -1.74
ATXN3-238ENST00000556288 PINK1Q9BXM7 581 aa4.18□□□□□ -1.74
ATXN3-238ENST00000556288 NSRP1Q9H0G5 558 aaKnown RBP4.18□□□□□ -1.74
ATXN3-238ENST00000556288 HHATLQ9HCP6 504 aa4.18□□□□□ -1.74
ATXN3-238ENST00000556288 SDR39U1Q9NRG7 319 aaPredicted RBP4.18□□□□□ -1.74
ATXN3-238ENST00000556288 QPCTLQ9NXS2 382 aa4.18□□□□□ -1.74
ATXN3-238ENST00000556288 LEF1Q9UJU2 399 aaPredicted RBP4.18□□□□□ -1.74
ATXN3-238ENST00000556288 SLC13A4Q9UKG4 626 aa4.18□□□□□ -1.74
ATXN3-238ENST00000556288 ABCG2Q9UNQ0 655 aa4.18□□□□□ -1.74
ATXN3-238ENST00000556288 LIPT1Q9Y234 373 aa4.18□□□□□ -1.74
ATXN3-238ENST00000556288 RNF6Q9Y252 685 aa4.18□□□□□ -1.74
ATXN3-238ENST00000556288 FLNCQ14315 2725 aa4.18□□□□□ -1.74
ATXN3-238ENST00000556288 DSCAMO60469 2012 aa4.17□□□□□ -1.74
ATXN3-238ENST00000556288 A0A0G2JPF8 293 aa4.17□□□□□ -1.74
ATXN3-238ENST00000556288 A0A1W2PP18 115 aa4.17□□□□□ -1.74
ATXN3-238ENST00000556288 OR2M5A3KFT3 312 aa4.17□□□□□ -1.74
ATXN3-238ENST00000556288 AQP7P3A6NL99 342 aa4.17□□□□□ -1.74
ATXN3-238ENST00000556288 CLDN24A6NM45 220 aa4.17□□□□□ -1.74
ATXN3-238ENST00000556288 CLCA1A8K7I4 914 aa4.17□□□□□ -1.74
ATXN3-238ENST00000556288 HSPB2A8KAH6 182 aa4.17□□□□□ -1.74
ATXN3-238ENST00000556288 KDM4EB2RXH2 506 aaPredicted RBP4.17□□□□□ -1.74
ATXN3-238ENST00000556288 HNRNPCL2B2RXH8 293 aa4.17□□□□□ -1.74
ATXN3-238ENST00000556288 HNRNPCL3B7ZW38 293 aa4.17□□□□□ -1.74
ATXN3-238ENST00000556288 H0YC42 278 aa4.17□□□□□ -1.74
ATXN3-238ENST00000556288 TNFSF11O14788 317 aa4.17□□□□□ -1.74
ATXN3-238ENST00000556288 EIF4E2O60573 245 aaKnown RBP4.17□□□□□ -1.74
ATXN3-238ENST00000556288 HNRNPCL1O60812 293 aaKnown RBP4.17□□□□□ -1.74
ATXN3-238ENST00000556288 CCDC22O60826 627 aa4.17□□□□□ -1.74
ATXN3-238ENST00000556288 UGT2B17O75795 530 aa4.17□□□□□ -1.74
ATXN3-238ENST00000556288 CLDN14O95500 239 aa4.17□□□□□ -1.74
ATXN3-238ENST00000556288 CLDN1O95832 211 aa4.17□□□□□ -1.74
ATXN3-238ENST00000556288 EPPINO95925 133 aa4.17□□□□□ -1.74
ATXN3-238ENST00000556288 AK1P00568 194 aa4.17□□□□□ -1.74
ATXN3-238ENST00000556288 IGLV2-14P01704 120 aa4.17□□□□□ -1.74
ATXN3-238ENST00000556288 DBIP07108 87 aaKnown RBP4.17□□□□□ -1.74
ATXN3-238ENST00000556288 HOXD4P09016 255 aaPredicted RBP4.17□□□□□ -1.74
ATXN3-238ENST00000556288 IFI6P09912 130 aa4.17□□□□□ -1.74
ATXN3-238ENST00000556288 GKN3PP0CG01 181 aa4.17□□□□□ -1.74
ATXN3-238ENST00000556288 HNRNPCL4P0DMR1 293 aa4.17□□□□□ -1.74
ATXN3-238ENST00000556288 TMIGD3P0DMS9 266 aaPredicted RBP4.17□□□□□ -1.74
ATXN3-238ENST00000556288 COX6B1P14854 86 aa4.17□□□□□ -1.74
ATXN3-238ENST00000556288 PGCP20142 388 aa4.17□□□□□ -1.74
ATXN3-238ENST00000556288 CAPN3P20807 821 aa4.17□□□□□ -1.74
ATXN3-238ENST00000556288 PPIBP23284 216 aaKnown RBP4.17□□□□□ -1.74
ATXN3-238ENST00000556288 CHMP24386 653 aa4.17□□□□□ -1.74
ATXN3-238ENST00000556288 AQP1P29972 269 aa4.17□□□□□ -1.74
ATXN3-238ENST00000556288 LCN1P31025 176 aa4.17□□□□□ -1.74
ATXN3-238ENST00000556288 MAP3K8P41279 467 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms