RNA–Protein interactions for RNA: ENST00000556274.5

ATXN3-237, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-237ENST00000556274 GP1BBP13224 206 aa4.18□□□□□ -1.74
ATXN3-237ENST00000556274 GABRA1P14867 456 aa4.18□□□□□ -1.74
ATXN3-237ENST00000556274 CD1EP15812 388 aa4.18□□□□□ -1.74
ATXN3-237ENST00000556274 BTF3P20290 206 aaKnown RBP4.18□□□□□ -1.74
ATXN3-237ENST00000556274 ME2P23368 584 aa4.18□□□□□ -1.74
ATXN3-237ENST00000556274 HTR1EP28566 365 aa4.18□□□□□ -1.74
ATXN3-237ENST00000556274 UQCRC1P31930 480 aa4.18□□□□□ -1.74
ATXN3-237ENST00000556274 SFTPDP35247 375 aa4.18□□□□□ -1.74
ATXN3-237ENST00000556274 ZFP36L2P47974 494 aaKnown RBP4.18□□□□□ -1.74
ATXN3-237ENST00000556274 P2RX1P51575 399 aa4.18□□□□□ -1.74
ATXN3-237ENST00000556274 GAS1P54826 345 aa4.18□□□□□ -1.74
ATXN3-237ENST00000556274 CLDN15P56746 228 aa4.18□□□□□ -1.74
ATXN3-237ENST00000556274 EEFSECP57772 596 aaKnown RBP4.18□□□□□ -1.74
ATXN3-237ENST00000556274 C21orf58P58505 322 aa4.18□□□□□ -1.74
ATXN3-237ENST00000556274 RPS3AP61247 264 aaKnown RBP4.18□□□□□ -1.74
ATXN3-237ENST00000556274 SNTB1Q13884 538 aaKnown RBP4.18□□□□□ -1.74
ATXN3-237ENST00000556274 GNA13Q14344 377 aa4.18□□□□□ -1.74
ATXN3-237ENST00000556274 CAPRIN1Q14444 709 aaKnown RBP4.18□□□□□ -1.74
ATXN3-237ENST00000556274 ZNF630Q2M218 657 aaPredicted RBP4.18□□□□□ -1.74
ATXN3-237ENST00000556274 HYAL4Q2M3T9 481 aa4.18□□□□□ -1.74
ATXN3-237ENST00000556274 TMEM176BQ3YBM2 270 aaPredicted RBP4.18□□□□□ -1.74
ATXN3-237ENST00000556274 GTDC1Q4AE62 458 aa4.18□□□□□ -1.74
ATXN3-237ENST00000556274 PAGE3Q5JUK9 113 aa4.18□□□□□ -1.74
ATXN3-237ENST00000556274 ZNF362Q5T0B9 420 aaPredicted RBP4.18□□□□□ -1.74
ATXN3-237ENST00000556274 DCST1Q5T197 706 aa4.18□□□□□ -1.74
ATXN3-237ENST00000556274 SAXO2Q658L1 398 aa4.18□□□□□ -1.74
ATXN3-237ENST00000556274 XKRXQ6PP77 449 aa4.18□□□□□ -1.74
ATXN3-237ENST00000556274 EIF3MQ7L2H7 374 aaKnown RBP4.18□□□□□ -1.74
ATXN3-237ENST00000556274 ZNF771Q7L3S4 317 aaPredicted RBP4.18□□□□□ -1.74
ATXN3-237ENST00000556274 CAMKMTQ7Z624 323 aa4.18□□□□□ -1.74
ATXN3-237ENST00000556274 GRAMD2AQ8IUY3 354 aa4.18□□□□□ -1.74
ATXN3-237ENST00000556274 LIX1LQ8IVB5 337 aa4.18□□□□□ -1.74
ATXN3-237ENST00000556274 FUNDC1Q8IVP5 155 aa4.18□□□□□ -1.74
ATXN3-237ENST00000556274 MCEMP1Q8IX19 187 aa4.18□□□□□ -1.74
ATXN3-237ENST00000556274 PEX5LQ8IYB4 626 aa4.18□□□□□ -1.74
ATXN3-237ENST00000556274 PM20D2Q8IYS1 436 aa4.18□□□□□ -1.74
ATXN3-237ENST00000556274 ZNF619Q8N2I2 560 aa4.18□□□□□ -1.74
ATXN3-237ENST00000556274 CADM2Q8N3J6 435 aa4.18□□□□□ -1.74
ATXN3-237ENST00000556274 RPRMLQ8N4K4 120 aa4.18□□□□□ -1.74
ATXN3-237ENST00000556274 CNEP1R1Q8N9A8 125 aa4.18□□□□□ -1.74
ATXN3-237ENST00000556274 TNIP2Q8NFZ5 429 aa4.18□□□□□ -1.74
ATXN3-237ENST00000556274 OR52P1PQ8NH57 321 aa4.18□□□□□ -1.74
ATXN3-237ENST00000556274 NFKBIDQ8NI38 313 aa4.18□□□□□ -1.74
ATXN3-237ENST00000556274 PSMA8Q8TAA3 256 aa4.18□□□□□ -1.74
ATXN3-237ENST00000556274 FAM110BQ8TC76 370 aa4.18□□□□□ -1.74
ATXN3-237ENST00000556274 SLC26A7Q8TE54 656 aa4.18□□□□□ -1.74
ATXN3-237ENST00000556274 ZFP90Q8TF47 636 aa4.18□□□□□ -1.74
ATXN3-237ENST00000556274 INTS12Q96CB8 462 aaKnown RBP4.18□□□□□ -1.74
ATXN3-237ENST00000556274 NEURL3Q96EH8 262 aa4.18□□□□□ -1.74
ATXN3-237ENST00000556274 WDYHV1Q96HA8 205 aa4.18□□□□□ -1.74
ATXN3-237ENST00000556274 REXO5Q96IC2 774 aaKnown RBP4.18□□□□□ -1.74
ATXN3-237ENST00000556274 ECSITQ9BQ95 431 aa4.18□□□□□ -1.74
ATXN3-237ENST00000556274 PIGQQ9BRB3 760 aa4.18□□□□□ -1.74
ATXN3-237ENST00000556274 SIKE1Q9BRV8 207 aa4.18□□□□□ -1.74
ATXN3-237ENST00000556274 TTYH2Q9BSA4 534 aa4.18□□□□□ -1.74
ATXN3-237ENST00000556274 PINK1Q9BXM7 581 aa4.18□□□□□ -1.74
ATXN3-237ENST00000556274 NSRP1Q9H0G5 558 aaKnown RBP4.18□□□□□ -1.74
ATXN3-237ENST00000556274 HHATLQ9HCP6 504 aa4.18□□□□□ -1.74
ATXN3-237ENST00000556274 SDR39U1Q9NRG7 319 aaPredicted RBP4.18□□□□□ -1.74
ATXN3-237ENST00000556274 QPCTLQ9NXS2 382 aa4.18□□□□□ -1.74
ATXN3-237ENST00000556274 LEF1Q9UJU2 399 aaPredicted RBP4.18□□□□□ -1.74
ATXN3-237ENST00000556274 SLC13A4Q9UKG4 626 aa4.18□□□□□ -1.74
ATXN3-237ENST00000556274 ABCG2Q9UNQ0 655 aa4.18□□□□□ -1.74
ATXN3-237ENST00000556274 LIPT1Q9Y234 373 aa4.18□□□□□ -1.74
ATXN3-237ENST00000556274 RNF6Q9Y252 685 aa4.18□□□□□ -1.74
ATXN3-237ENST00000556274 FLNCQ14315 2725 aa4.18□□□□□ -1.74
ATXN3-237ENST00000556274 DSCAMO60469 2012 aa4.17□□□□□ -1.74
ATXN3-237ENST00000556274 A0A0G2JPF8 293 aa4.17□□□□□ -1.74
ATXN3-237ENST00000556274 A0A1W2PP18 115 aa4.17□□□□□ -1.74
ATXN3-237ENST00000556274 OR2M5A3KFT3 312 aa4.17□□□□□ -1.74
ATXN3-237ENST00000556274 AQP7P3A6NL99 342 aa4.17□□□□□ -1.74
ATXN3-237ENST00000556274 CLDN24A6NM45 220 aa4.17□□□□□ -1.74
ATXN3-237ENST00000556274 CLCA1A8K7I4 914 aa4.17□□□□□ -1.74
ATXN3-237ENST00000556274 HSPB2A8KAH6 182 aa4.17□□□□□ -1.74
ATXN3-237ENST00000556274 KDM4EB2RXH2 506 aaPredicted RBP4.17□□□□□ -1.74
ATXN3-237ENST00000556274 HNRNPCL2B2RXH8 293 aa4.17□□□□□ -1.74
ATXN3-237ENST00000556274 HNRNPCL3B7ZW38 293 aa4.17□□□□□ -1.74
ATXN3-237ENST00000556274 H0YC42 278 aa4.17□□□□□ -1.74
ATXN3-237ENST00000556274 TNFSF11O14788 317 aa4.17□□□□□ -1.74
ATXN3-237ENST00000556274 EIF4E2O60573 245 aaKnown RBP4.17□□□□□ -1.74
ATXN3-237ENST00000556274 HNRNPCL1O60812 293 aaKnown RBP4.17□□□□□ -1.74
ATXN3-237ENST00000556274 CCDC22O60826 627 aa4.17□□□□□ -1.74
ATXN3-237ENST00000556274 UGT2B17O75795 530 aa4.17□□□□□ -1.74
ATXN3-237ENST00000556274 CLDN14O95500 239 aa4.17□□□□□ -1.74
ATXN3-237ENST00000556274 CLDN1O95832 211 aa4.17□□□□□ -1.74
ATXN3-237ENST00000556274 EPPINO95925 133 aa4.17□□□□□ -1.74
ATXN3-237ENST00000556274 AK1P00568 194 aa4.17□□□□□ -1.74
ATXN3-237ENST00000556274 IGLV2-14P01704 120 aa4.17□□□□□ -1.74
ATXN3-237ENST00000556274 DBIP07108 87 aaKnown RBP4.17□□□□□ -1.74
ATXN3-237ENST00000556274 HOXD4P09016 255 aaPredicted RBP4.17□□□□□ -1.74
ATXN3-237ENST00000556274 IFI6P09912 130 aa4.17□□□□□ -1.74
ATXN3-237ENST00000556274 GKN3PP0CG01 181 aa4.17□□□□□ -1.74
ATXN3-237ENST00000556274 HNRNPCL4P0DMR1 293 aa4.17□□□□□ -1.74
ATXN3-237ENST00000556274 TMIGD3P0DMS9 266 aaPredicted RBP4.17□□□□□ -1.74
ATXN3-237ENST00000556274 COX6B1P14854 86 aa4.17□□□□□ -1.74
ATXN3-237ENST00000556274 PGCP20142 388 aa4.17□□□□□ -1.74
ATXN3-237ENST00000556274 CAPN3P20807 821 aa4.17□□□□□ -1.74
ATXN3-237ENST00000556274 PPIBP23284 216 aaKnown RBP4.17□□□□□ -1.74
ATXN3-237ENST00000556274 CHMP24386 653 aa4.17□□□□□ -1.74
ATXN3-237ENST00000556274 AQP1P29972 269 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms