RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 UGT2B15P54855 530 aa6.83□□□□□ -1.32
TDP1-214ENST00000556063 H3F3AP84243 136 aa6.83□□□□□ -1.32
TDP1-214ENST00000556063 IL1RL1Q01638 556 aa6.83□□□□□ -1.32
TDP1-214ENST00000556063 PRKCDQ05655 676 aa6.83□□□□□ -1.32
TDP1-214ENST00000556063 RASGEF1BQ0VAM2 473 aa6.83□□□□□ -1.32
TDP1-214ENST00000556063 PMS2P3Q13401 168 aa6.83□□□□□ -1.32
TDP1-214ENST00000556063 C1DQ13901 141 aaKnown RBP6.83□□□□□ -1.32
TDP1-214ENST00000556063 PDK3Q15120 406 aa6.83□□□□□ -1.32
TDP1-214ENST00000556063 ZNF74Q16587 644 aa6.83□□□□□ -1.32
TDP1-214ENST00000556063 TMEM201Q5SNT2 666 aa6.83□□□□□ -1.32
TDP1-214ENST00000556063 OTUD3Q5T2D3 398 aaPredicted RBP6.83□□□□□ -1.32
TDP1-214ENST00000556063 RTL6Q6ICC9 239 aa6.83□□□□□ -1.32
TDP1-214ENST00000556063 C3P1Q6ZMU1 363 aa6.83□□□□□ -1.32
TDP1-214ENST00000556063 WDR88Q6ZMY6 472 aa6.83□□□□□ -1.32
TDP1-214ENST00000556063 TMPRSS11FQ6ZWK6 438 aa6.83□□□□□ -1.32
TDP1-214ENST00000556063 NANOGNBQ7Z5D8 188 aa6.83□□□□□ -1.32
TDP1-214ENST00000556063 P3H2Q8IVL5 708 aa6.83□□□□□ -1.32
TDP1-214ENST00000556063 NRMQ8IXM6 262 aa6.83□□□□□ -1.32
TDP1-214ENST00000556063 ADPRHL1Q8NDY3 354 aa6.83□□□□□ -1.32
TDP1-214ENST00000556063 OR4K5Q8NGD3 323 aa6.83□□□□□ -1.32
TDP1-214ENST00000556063 OR5J2Q8NH18 312 aa6.83□□□□□ -1.32
TDP1-214ENST00000556063 SLC7A13Q8TCU3 470 aa6.83□□□□□ -1.32
TDP1-214ENST00000556063 RNF128Q8TEB7 428 aa6.83□□□□□ -1.32
TDP1-214ENST00000556063 ASB5Q8WWX0 329 aa6.83□□□□□ -1.32
TDP1-214ENST00000556063 ROBO4Q8WZ75 1007 aa6.83□□□□□ -1.32
TDP1-214ENST00000556063 TAAR8Q969N4 342 aa6.83□□□□□ -1.32
TDP1-214ENST00000556063 SDCCAG3Q96C92 435 aa6.83□□□□□ -1.32
TDP1-214ENST00000556063 BPIFA2Q96DR5 249 aa6.83□□□□□ -1.32
TDP1-214ENST00000556063 DNAJA3Q96EY1 480 aa6.83□□□□□ -1.32
TDP1-214ENST00000556063 GMPPAQ96IJ6 420 aaPredicted RBP6.83□□□□□ -1.32
TDP1-214ENST00000556063 DMRTA2Q96SC8 542 aa6.83□□□□□ -1.32
TDP1-214ENST00000556063 PTDSS2Q9BVG9 487 aa6.83□□□□□ -1.32
TDP1-214ENST00000556063 SF3B5Q9BWJ5 86 aaKnown RBP6.83□□□□□ -1.32
TDP1-214ENST00000556063 SRXN1Q9BYN0 137 aa6.83□□□□□ -1.32
TDP1-214ENST00000556063 CHST11Q9NPF2 352 aa6.83□□□□□ -1.32
TDP1-214ENST00000556063 MEPEQ9NQ76 525 aaPredicted RBP6.83□□□□□ -1.32
TDP1-214ENST00000556063 MAN2C1Q9NTJ4 1040 aa6.83□□□□□ -1.32
TDP1-214ENST00000556063 MRPL39Q9NYK5 338 aaKnown RBP6.83□□□□□ -1.32
TDP1-214ENST00000556063 ERRFI1Q9UJM3 462 aaPredicted RBP6.83□□□□□ -1.32
TDP1-214ENST00000556063 EMC9Q9Y3B6 208 aa6.83□□□□□ -1.32
TDP1-214ENST00000556063 LYVE1Q9Y5Y7 322 aa6.83□□□□□ -1.32
TDP1-214ENST00000556063 LAMA5O15230 3695 aa6.83□□□□□ -1.32
TDP1-214ENST00000556063 FASNP49327 2511 aaKnown RBP6.83□□□□□ -1.32
TDP1-214ENST00000556063 SPTAN1Q13813 2472 aaKnown RBP6.82□□□□□ -1.32
TDP1-214ENST00000556063 TRBV4-1A0A0J9YWV2 114 aa6.82□□□□□ -1.32
TDP1-214ENST00000556063 LOC102725191A0A1B0GVB3 256 aa6.82□□□□□ -1.32
TDP1-214ENST00000556063 ARRDC5A6NEK1 342 aa6.82□□□□□ -1.32
TDP1-214ENST00000556063 AQP7P3A6NL99 342 aa6.82□□□□□ -1.32
TDP1-214ENST00000556063 ZNF724A8MTY0 619 aa6.82□□□□□ -1.32
TDP1-214ENST00000556063 FTCDNL1E5RQL4 147 aa6.82□□□□□ -1.32
TDP1-214ENST00000556063 H0YHG0 523 aa6.82□□□□□ -1.32
TDP1-214ENST00000556063 M0R082 166 aa6.82□□□□□ -1.32
TDP1-214ENST00000556063 DVL2O14641 736 aa6.82□□□□□ -1.32
TDP1-214ENST00000556063 SMAD9O15198 467 aaKnown RBP6.82□□□□□ -1.32
TDP1-214ENST00000556063 FZD7O75084 574 aa6.82□□□□□ -1.32
TDP1-214ENST00000556063 TIPRLO75663 272 aa6.82□□□□□ -1.32
TDP1-214ENST00000556063 AQP8O94778 261 aa6.82□□□□□ -1.32
TDP1-214ENST00000556063 AGFG2O95081 481 aa6.82□□□□□ -1.32
TDP1-214ENST00000556063 AKR7A3O95154 331 aa6.82□□□□□ -1.32
TDP1-214ENST00000556063 TGM6O95932 706 aa6.82□□□□□ -1.32
TDP1-214ENST00000556063 IL18BPO95998 194 aa6.82□□□□□ -1.32
TDP1-214ENST00000556063 BGLAPP02818 100 aa6.82□□□□□ -1.32
TDP1-214ENST00000556063 YES1P07947 543 aa6.82□□□□□ -1.32
TDP1-214ENST00000556063 ADORA3P0DMS8 318 aa6.82□□□□□ -1.32
TDP1-214ENST00000556063 ZNF43P17038 809 aa6.82□□□□□ -1.32
TDP1-214ENST00000556063 PTNP21246 168 aa6.82□□□□□ -1.32
TDP1-214ENST00000556063 CBLP22681 906 aa6.82□□□□□ -1.32
TDP1-214ENST00000556063 CTSSP25774 331 aa6.82□□□□□ -1.32
TDP1-214ENST00000556063 CEACAM8P31997 349 aaPredicted RBP6.82□□□□□ -1.32
TDP1-214ENST00000556063 SLC16A1P53985 500 aa6.82□□□□□ -1.32
TDP1-214ENST00000556063 PUDPQ08623 228 aa6.82□□□□□ -1.32
TDP1-214ENST00000556063 ATP6AP1Q15904 470 aa6.82□□□□□ -1.32
TDP1-214ENST00000556063 MICAQ29983 383 aa6.82□□□□□ -1.32
TDP1-214ENST00000556063 EXOC3L2Q2M3D2 409 aa6.82□□□□□ -1.32
TDP1-214ENST00000556063 XKRXQ6PP77 449 aa6.82□□□□□ -1.32
TDP1-214ENST00000556063 GALNT5Q7Z7M9 940 aa6.82□□□□□ -1.32
TDP1-214ENST00000556063 GPAT4Q86UL3 456 aa6.82□□□□□ -1.32
TDP1-214ENST00000556063 STK32CQ86UX6 486 aa6.82□□□□□ -1.32
TDP1-214ENST00000556063 TMEM99Q8N816 258 aa6.82□□□□□ -1.32
TDP1-214ENST00000556063 C9orf106Q8NAJ2 232 aa6.82□□□□□ -1.32
TDP1-214ENST00000556063 PFN4Q8NHR9 129 aa6.82□□□□□ -1.32
TDP1-214ENST00000556063 ZNF417Q8TAU3 575 aa6.82□□□□□ -1.32
TDP1-214ENST00000556063 GNPDA2Q8TDQ7 276 aa6.82□□□□□ -1.32
TDP1-214ENST00000556063 GIPC3Q8TF64 312 aa6.82□□□□□ -1.32
TDP1-214ENST00000556063 LIPHQ8WWY8 451 aa6.82□□□□□ -1.32
TDP1-214ENST00000556063 PYDC1Q8WXC3 89 aa6.82□□□□□ -1.32
TDP1-214ENST00000556063 SLCO4A1Q96BD0 722 aa6.82□□□□□ -1.32
TDP1-214ENST00000556063 INTS12Q96CB8 462 aaKnown RBP6.82□□□□□ -1.32
TDP1-214ENST00000556063 NRBF2Q96F24 287 aa6.82□□□□□ -1.32
TDP1-214ENST00000556063 LRRC46Q96FV0 321 aa6.82□□□□□ -1.32
TDP1-214ENST00000556063 OXGR1Q96P68 337 aa6.82□□□□□ -1.32
TDP1-214ENST00000556063 ZNF587Q96SQ5 575 aaPredicted RBP6.82□□□□□ -1.32
TDP1-214ENST00000556063 SFXN3Q9BWM7 321 aa6.82□□□□□ -1.32
TDP1-214ENST00000556063 RNF122Q9H9V4 155 aa6.82□□□□□ -1.32
TDP1-214ENST00000556063 ZNF556Q9HAH1 456 aa6.82□□□□□ -1.32
TDP1-214ENST00000556063 FANCFQ9NPI8 374 aa6.82□□□□□ -1.32
TDP1-214ENST00000556063 PARPBPQ9NWS1 579 aa6.82□□□□□ -1.32
TDP1-214ENST00000556063 KLHL13Q9P2N7 655 aa6.82□□□□□ -1.32
TDP1-214ENST00000556063 ZNF629Q9UEG4 869 aaPredicted RBP6.82□□□□□ -1.32
TDP1-214ENST00000556063 MGAT4BQ9UQ53 548 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms